RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 UBXN8O00124 270 aa18.26■□□□□ 0.51
DDX55-211ENST00000544429 MAP2K7O14733 419 aa18.26■□□□□ 0.51
DDX55-211ENST00000544429 KLK3P07288 261 aaPredicted RBP18.26■□□□□ 0.51
DDX55-211ENST00000544429 TUBBP07437 444 aa18.26■□□□□ 0.51
DDX55-211ENST00000544429 EPORP19235 508 aa18.26■□□□□ 0.51
DDX55-211ENST00000544429 GLRBP48167 497 aa18.26■□□□□ 0.51
DDX55-211ENST00000544429 CCR8P51685 355 aa18.26■□□□□ 0.51
DDX55-211ENST00000544429 ARSFP54793 590 aa18.26■□□□□ 0.51
DDX55-211ENST00000544429 PCDH1Q08174 1060 aa18.26■□□□□ 0.51
DDX55-211ENST00000544429 VAC14Q08AM6 782 aa18.26■□□□□ 0.51
DDX55-211ENST00000544429 E2F2Q14209 437 aa18.26■□□□□ 0.51
DDX55-211ENST00000544429 NAA30Q147X3 362 aaPredicted RBP18.26■□□□□ 0.51
DDX55-211ENST00000544429 TSNAXIP1Q2TAA8 658 aa18.26■□□□□ 0.51
DDX55-211ENST00000544429 CRTC2Q53ET0 693 aaPredicted RBP18.26■□□□□ 0.51
DDX55-211ENST00000544429 CATSPEREQ5SY80 951 aa18.26■□□□□ 0.51
DDX55-211ENST00000544429 KLC3Q6P597 504 aa18.26■□□□□ 0.51
DDX55-211ENST00000544429 FAM199XQ6PEV8 388 aaPredicted RBP18.26■□□□□ 0.51
DDX55-211ENST00000544429 C19orf48Q6RUI8 117 aa18.26■□□□□ 0.51
DDX55-211ENST00000544429 FAM198BQ6UWH4 519 aa18.26■□□□□ 0.51
DDX55-211ENST00000544429 CCDC81Q6ZN84 652 aa18.26■□□□□ 0.51
DDX55-211ENST00000544429 SLCO4C1Q6ZQN7 724 aa18.26■□□□□ 0.51
DDX55-211ENST00000544429 LCA5Q86VQ0 697 aa18.26■□□□□ 0.51
DDX55-211ENST00000544429 PLD3Q8IV08 490 aa18.26■□□□□ 0.51
DDX55-211ENST00000544429 ACMSDQ8TDX5 336 aa18.26■□□□□ 0.51
DDX55-211ENST00000544429 C10orf90Q96M02 699 aa18.26■□□□□ 0.51
DDX55-211ENST00000544429 NDC1Q9BTX1 674 aa18.26■□□□□ 0.51
DDX55-211ENST00000544429 EFHD1Q9BUP0 239 aa18.26■□□□□ 0.51
DDX55-211ENST00000544429 CD244Q9BZW8 370 aa18.26■□□□□ 0.51
DDX55-211ENST00000544429 CHST8Q9H2A9 424 aa18.26■□□□□ 0.51
DDX55-211ENST00000544429 GPN2Q9H9Y4 310 aaPredicted RBP18.26■□□□□ 0.51
DDX55-211ENST00000544429 PELI2Q9HAT8 420 aa18.26■□□□□ 0.51
DDX55-211ENST00000544429 STARD5Q9NSY2 213 aa18.26■□□□□ 0.51
DDX55-211ENST00000544429 GPRC5BQ9NZH0 403 aa18.26■□□□□ 0.51
DDX55-211ENST00000544429 COPG2Q9UBF2 871 aa18.26■□□□□ 0.51
DDX55-211ENST00000544429 DHCR7Q9UBM7 475 aaKnown RBP18.26■□□□□ 0.51
DDX55-211ENST00000544429 IL17BQ9UHF5 180 aa18.26■□□□□ 0.51
DDX55-211ENST00000544429 A0A1B0GX78 115 aa18.25■□□□□ 0.51
DDX55-211ENST00000544429 DSCR3O14972 297 aa18.25■□□□□ 0.51
DDX55-211ENST00000544429 P2RX6O15547 441 aa18.25■□□□□ 0.51
DDX55-211ENST00000544429 LCMT2O60294 686 aaKnown RBP18.25■□□□□ 0.51
DDX55-211ENST00000544429 PRAMEF4O60810 478 aa18.25■□□□□ 0.51
DDX55-211ENST00000544429 STK16O75716 305 aa18.25■□□□□ 0.51
DDX55-211ENST00000544429 WDR47O94967 919 aa18.25■□□□□ 0.51
DDX55-211ENST00000544429 RAB40ALP0C0E4 278 aa18.25■□□□□ 0.51
DDX55-211ENST00000544429 SBK3P0C264 359 aa18.25■□□□□ 0.51
DDX55-211ENST00000544429 TCN2P20062 427 aa18.25■□□□□ 0.51
DDX55-211ENST00000544429 DLSTP36957 453 aa18.25■□□□□ 0.51
DDX55-211ENST00000544429 BCL6P41182 706 aa18.25■□□□□ 0.51
DDX55-211ENST00000544429 HSPA7P48741 367 aa18.25■□□□□ 0.51
DDX55-211ENST00000544429 DNASE1L3Q13609 305 aa18.25■□□□□ 0.51
DDX55-211ENST00000544429 FAM214AQ32MH5 1076 aa18.25■□□□□ 0.51
DDX55-211ENST00000544429 PRAMEF9Q5VWM5 478 aa18.25■□□□□ 0.51
DDX55-211ENST00000544429 NXPE4Q6UWF7 544 aa18.25■□□□□ 0.51
DDX55-211ENST00000544429 ADCK2Q7Z695 626 aa18.25■□□□□ 0.51
DDX55-211ENST00000544429 KIAA1143Q96AT1 154 aaPredicted RBP18.25■□□□□ 0.51
DDX55-211ENST00000544429 WDR34Q96EX3 536 aa18.25■□□□□ 0.51
DDX55-211ENST00000544429 TSNARE1Q96NA8 513 aa18.25■□□□□ 0.51
DDX55-211ENST00000544429 GPR87Q9BY21 358 aa18.25■□□□□ 0.51
DDX55-211ENST00000544429 SPNS1Q9H2V7 528 aa18.25■□□□□ 0.51
DDX55-211ENST00000544429 CUTCQ9NTM9 273 aa18.25■□□□□ 0.51
DDX55-211ENST00000544429 WWOXQ9NZC7 414 aa18.25■□□□□ 0.51
DDX55-211ENST00000544429 CACNA1GO43497 2377 aa18.25■□□□□ 0.51
DDX55-211ENST00000544429 TRBC2A0A5B9 178 aa18.24■□□□□ 0.51
DDX55-211ENST00000544429 FEZF1A0PJY2 475 aa18.24■□□□□ 0.51
DDX55-211ENST00000544429 HYKKA2RU49 373 aa18.24■□□□□ 0.51
DDX55-211ENST00000544429 RECKO95980 971 aa18.24■□□□□ 0.51
DDX55-211ENST00000544429 RBP1P09455 135 aa18.24■□□□□ 0.51
DDX55-211ENST00000544429 GNAZP19086 355 aa18.24■□□□□ 0.51
DDX55-211ENST00000544429 AGTR2P50052 363 aa18.24■□□□□ 0.51
DDX55-211ENST00000544429 REEP5Q00765 189 aa18.24■□□□□ 0.51
DDX55-211ENST00000544429 CDC16Q13042 620 aa18.24■□□□□ 0.51
DDX55-211ENST00000544429 SETDB1Q15047 1291 aa18.24■□□□□ 0.51
DDX55-211ENST00000544429 HKDC1Q2TB90 917 aa18.24■□□□□ 0.51
DDX55-211ENST00000544429 FBXO48Q5FWF7 155 aa18.24■□□□□ 0.51
DDX55-211ENST00000544429 GARNL3Q5VVW2 1013 aa18.24■□□□□ 0.51
DDX55-211ENST00000544429 LRRC70Q7Z2Q7 622 aa18.24■□□□□ 0.51
DDX55-211ENST00000544429 CYP4X1Q8N118 509 aa18.24■□□□□ 0.51
DDX55-211ENST00000544429 CSNK1A1LQ8N752 337 aa18.24■□□□□ 0.51
DDX55-211ENST00000544429 MFSD9Q8NBP5 474 aa18.24■□□□□ 0.51
DDX55-211ENST00000544429 ZNF740Q8NDX6 193 aa18.24■□□□□ 0.51
DDX55-211ENST00000544429 EPS8L3Q8TE67 593 aaKnown RBP18.24■□□□□ 0.51
DDX55-211ENST00000544429 EXT2Q93063 718 aa18.24■□□□□ 0.51
DDX55-211ENST00000544429 MR1Q95460 341 aa18.24■□□□□ 0.51
DDX55-211ENST00000544429 ESAMQ96AP7 390 aa18.24■□□□□ 0.51
DDX55-211ENST00000544429 RUFY1Q96T51 708 aa18.24■□□□□ 0.51
DDX55-211ENST00000544429 CAPS2Q9BXY5 557 aa18.24■□□□□ 0.51
DDX55-211ENST00000544429 NLNQ9BYT8 704 aa18.24■□□□□ 0.51
DDX55-211ENST00000544429 EHD1Q9H4M9 534 aa18.24■□□□□ 0.51
DDX55-211ENST00000544429 SLC22A11Q9NSA0 550 aa18.24■□□□□ 0.51
DDX55-211ENST00000544429 DNAJC11Q9NVH1 559 aa18.24■□□□□ 0.51
DDX55-211ENST00000544429 KCND3Q9UK17 655 aa18.24■□□□□ 0.51
DDX55-211ENST00000544429 RUVBL1Q9Y265 456 aaKnown RBP18.24■□□□□ 0.51
DDX55-211ENST00000544429 DYRK1BQ9Y463 629 aa18.24■□□□□ 0.51
DDX55-211ENST00000544429 ATMQ13315 3056 aa18.24■□□□□ 0.51
DDX55-211ENST00000544429 SUPT3HB4E1H0 165 aa18.23■□□□□ 0.51
DDX55-211ENST00000544429 TXNDC9O14530 226 aa18.23■□□□□ 0.51
DDX55-211ENST00000544429 CDH16O75309 829 aa18.23■□□□□ 0.51
DDX55-211ENST00000544429 SUPT3HO75486 399 aa18.23■□□□□ 0.51
DDX55-211ENST00000544429 SCTRP47872 440 aa18.23■□□□□ 0.51
DDX55-211ENST00000544429 ALDH18A1P54886 795 aaKnown RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms