RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 FASLGP48023 281 aa29.23■■■□□ 2.27
CCM2-219ENST00000544363 DEFB133Q30KQ1 61 aa29.23■■■□□ 2.27
CCM2-219ENST00000544363 CHCHD2P9Q5T1J5 151 aaPredicted RBP29.23■■■□□ 2.27
CCM2-219ENST00000544363 OGFOD3Q6PK18 319 aa29.23■■■□□ 2.27
CCM2-219ENST00000544363 CYP20A1Q6UW02 462 aa29.23■■■□□ 2.27
CCM2-219ENST00000544363 ADCK2Q7Z695 626 aa29.23■■■□□ 2.27
CCM2-219ENST00000544363 SYT12Q8IV01 421 aa29.23■■■□□ 2.27
CCM2-219ENST00000544363 ARL14Q8N4G2 192 aa29.23■■■□□ 2.27
CCM2-219ENST00000544363 METTL2AQ96IZ6 378 aaKnown RBP29.23■■■□□ 2.27
CCM2-219ENST00000544363 BTBD10Q9BSF8 475 aa29.23■■■□□ 2.27
CCM2-219ENST00000544363 SDAD1Q9NVU7 687 aaKnown RBP eCLIP29.23■■■□□ 2.27
CCM2-219ENST00000544363 TAS2R1Q9NYW7 299 aa29.23■■■□□ 2.27
CCM2-219ENST00000544363 ETHE1O95571 254 aa29.23■■■□□ 2.27
CCM2-219ENST00000544363 POLR2CP19387 275 aaPredicted RBP29.23■■■□□ 2.27
CCM2-219ENST00000544363 RXRGP48443 463 aa29.23■■■□□ 2.27
CCM2-219ENST00000544363 CORO7P57737 925 aa29.23■■■□□ 2.27
CCM2-219ENST00000544363 CACHD1Q5VU97 1274 aa29.23■■■□□ 2.27
CCM2-219ENST00000544363 PEAR1Q5VY43 1037 aaPredicted RBP29.23■■■□□ 2.27
CCM2-219ENST00000544363 KIAA1614Q5VZ46 1190 aa29.23■■■□□ 2.27
CCM2-219ENST00000544363 C17orf82Q86X59 251 aaPredicted RBP29.23■■■□□ 2.27
CCM2-219ENST00000544363 KIF2BQ8N4N8 673 aa29.23■■■□□ 2.27
CCM2-219ENST00000544363 FLVCR1-AS1Q8TAF5 88 aa29.23■■■□□ 2.27
CCM2-219ENST00000544363 ELF4Q99607 663 aaPredicted RBP29.23■■■□□ 2.27
CCM2-219ENST00000544363 RTKNQ9BST9 563 aa29.23■■■□□ 2.27
CCM2-219ENST00000544363 DPH7Q9BTV6 452 aa29.23■■■□□ 2.27
CCM2-219ENST00000544363 TMEM45AQ9NWC5 275 aa29.23■■■□□ 2.27
CCM2-219ENST00000544363 NMRK1Q9NWW6 199 aa29.23■■■□□ 2.27
CCM2-219ENST00000544363 PPT2Q9UMR5 302 aa29.23■■■□□ 2.27
CCM2-219ENST00000544363 ENTPD2Q9Y5L3 495 aa29.23■■■□□ 2.27
CCM2-219ENST00000544363 CSNK1G3Q9Y6M4 447 aa29.23■■■□□ 2.27
CCM2-219ENST00000544363 SNRPB2P08579 225 aaKnown RBP29.22■■■□□ 2.27
CCM2-219ENST00000544363 SP9P0CG40 484 aa29.22■■■□□ 2.27
CCM2-219ENST00000544363 VN1R5Q7Z5H4 357 aa29.22■■■□□ 2.27
CCM2-219ENST00000544363 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP29.22■■■□□ 2.27
CCM2-219ENST00000544363 OR10G6Q8NH81 332 aa29.22■■■□□ 2.27
CCM2-219ENST00000544363 FBXO27Q8NI29 283 aa29.22■■■□□ 2.27
CCM2-219ENST00000544363 OR2A14Q96R47 310 aa29.22■■■□□ 2.27
CCM2-219ENST00000544363 ACTR10Q9NZ32 417 aa29.22■■■□□ 2.27
CCM2-219ENST00000544363 FEZF1A0PJY2 475 aa29.21■■■□□ 2.27
CCM2-219ENST00000544363 SLC22A3O75751 556 aa29.21■■■□□ 2.27
CCM2-219ENST00000544363 ACPPP15309 386 aa29.21■■■□□ 2.27
CCM2-219ENST00000544363 MAPK1P28482 360 aa29.21■■■□□ 2.27
CCM2-219ENST00000544363 SERPINB1P30740 379 aa29.21■■■□□ 2.27
CCM2-219ENST00000544363 UFM1P61960 85 aa29.21■■■□□ 2.27
CCM2-219ENST00000544363 ANKRD53Q8N9V6 530 aa29.21■■■□□ 2.27
CCM2-219ENST00000544363 ZBTB44Q8NCP5 570 aa29.21■■■□□ 2.27
CCM2-219ENST00000544363 RBM15BQ8NDT2 890 aaKnown RBP29.21■■■□□ 2.27
CCM2-219ENST00000544363 FCRL1Q96LA6 429 aa29.21■■■□□ 2.27
CCM2-219ENST00000544363 APOLD1Q96LR9 279 aa29.21■■■□□ 2.27
CCM2-219ENST00000544363 C1orf21Q9H246 121 aa29.21■■■□□ 2.27
CCM2-219ENST00000544363 UCK1Q9HA47 277 aa29.21■■■□□ 2.27
CCM2-219ENST00000544363 HEATR5BQ9P2D3 2071 aa29.21■■■□□ 2.27
CCM2-219ENST00000544363 SNX7Q9UNH6 387 aa29.21■■■□□ 2.27
CCM2-219ENST00000544363 TRBC2A0A5B9 178 aa29.2■■■□□ 2.27
CCM2-219ENST00000544363 ANKDD1BA6NHY2 528 aa29.2■■■□□ 2.27
CCM2-219ENST00000544363 PPM1DO15297 605 aa29.2■■■□□ 2.27
CCM2-219ENST00000544363 GYG2O15488 501 aa29.2■■■□□ 2.27
CCM2-219ENST00000544363 BCKDHAP12694 445 aa29.2■■■□□ 2.27
CCM2-219ENST00000544363 UGT2B7P16662 529 aa29.2■■■□□ 2.27
CCM2-219ENST00000544363 GRK3P35626 688 aa29.2■■■□□ 2.27
CCM2-219ENST00000544363 ARRB1P49407 418 aaPredicted RBP29.2■■■□□ 2.27
CCM2-219ENST00000544363 MXRA7P84157 204 aa29.2■■■□□ 2.27
CCM2-219ENST00000544363 BNIP3Q12983 259 aa29.2■■■□□ 2.27
CCM2-219ENST00000544363 ZNF761Q86XN6 746 aaPredicted RBP29.2■■■□□ 2.27
CCM2-219ENST00000544363 LIX1Q8N485 282 aa29.2■■■□□ 2.27
CCM2-219ENST00000544363 TEX37Q96LM6 180 aa29.2■■■□□ 2.27
CCM2-219ENST00000544363 SERPINI1Q99574 410 aa29.2■■■□□ 2.27
CCM2-219ENST00000544363 SLC25A23Q9BV35 468 aa29.2■■■□□ 2.27
CCM2-219ENST00000544363 TBC1D10AQ9BXI6 508 aa29.2■■■□□ 2.27
CCM2-219ENST00000544363 GSAPA4D1B5 854 aa29.2■■■□□ 2.26
CCM2-219ENST00000544363 C2orf74A8MZ97 194 aa29.2■■■□□ 2.26
CCM2-219ENST00000544363 ANKRD28O15084 1053 aa29.2■■■□□ 2.26
CCM2-219ENST00000544363 OR1F1O43749 312 aa29.2■■■□□ 2.26
CCM2-219ENST00000544363 TGFB1P01137 390 aa29.2■■■□□ 2.26
CCM2-219ENST00000544363 PRPS2P11908 318 aa29.2■■■□□ 2.26
CCM2-219ENST00000544363 TBL3Q12788 808 aaKnown RBP29.2■■■□□ 2.26
CCM2-219ENST00000544363 STX5Q13190 355 aa29.2■■■□□ 2.26
CCM2-219ENST00000544363 CUL3Q13618 768 aa29.2■■■□□ 2.26
CCM2-219ENST00000544363 SHBQ15464 509 aa29.2■■■□□ 2.26
CCM2-219ENST00000544363 ZNF425Q6IV72 752 aa29.2■■■□□ 2.26
CCM2-219ENST00000544363 PROKR1Q8TCW9 393 aa29.2■■■□□ 2.26
CCM2-219ENST00000544363 HRASLS2Q9NWW9 162 aa29.2■■■□□ 2.26
CCM2-219ENST00000544363 DLGAP4Q9Y2H0 992 aa29.2■■■□□ 2.26
CCM2-219ENST00000544363 CFAP73A6NFT4 308 aa29.19■■■□□ 2.26
CCM2-219ENST00000544363 LCMT2O60294 686 aaKnown RBP29.19■■■□□ 2.26
CCM2-219ENST00000544363 SH3BGRLO75368 114 aa29.19■■■□□ 2.26
CCM2-219ENST00000544363 PTX3P26022 381 aaPredicted RBP29.19■■■□□ 2.26
CCM2-219ENST00000544363 ACSM2AQ08AH3 577 aa29.19■■■□□ 2.26
CCM2-219ENST00000544363 ANGPT1Q15389 498 aa29.19■■■□□ 2.26
CCM2-219ENST00000544363 ACSM2BQ68CK6 577 aa29.19■■■□□ 2.26
CCM2-219ENST00000544363 NOXRED1Q6NXP6 359 aa29.19■■■□□ 2.26
CCM2-219ENST00000544363 BLOC1S3Q6QNY0 202 aa29.19■■■□□ 2.26
CCM2-219ENST00000544363 SLC25A45Q8N413 288 aa29.19■■■□□ 2.26
CCM2-219ENST00000544363 GPR156Q8NFN8 814 aa29.19■■■□□ 2.26
CCM2-219ENST00000544363 CHTF18Q8WVB6 975 aa29.19■■■□□ 2.26
CCM2-219ENST00000544363 C11orf24Q96F05 449 aaPredicted RBP29.19■■■□□ 2.26
CCM2-219ENST00000544363 SARGQ9BW04 601 aa29.19■■■□□ 2.26
CCM2-219ENST00000544363 ACTL8Q9H568 366 aa29.19■■■□□ 2.26
CCM2-219ENST00000544363 RUVBL1Q9Y265 456 aaKnown RBP29.19■■■□□ 2.26
CCM2-219ENST00000544363 PCSK2P16519 638 aa29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms