RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 SERHLQ9NQF3 203 aa13.16□□□□□ -0.3
HCFC2-202ENST00000544223 SUCOQ9UBS9 1254 aaKnown RBP13.16□□□□□ -0.3
HCFC2-202ENST00000544223 ANGPTL2Q9UKU9 493 aa13.16□□□□□ -0.3
HCFC2-202ENST00000544223 PCDHGA11Q9Y5H2 935 aa13.16□□□□□ -0.3
HCFC2-202ENST00000544223 BDP1A6H8Y1 2624 aa13.16□□□□□ -0.3
HCFC2-202ENST00000544223 IGKV1-8A0A0C4DH67 115 aa13.16□□□□□ -0.3
HCFC2-202ENST00000544223 IGHV4-34P06331 123 aa13.16□□□□□ -0.3
HCFC2-202ENST00000544223 POU3F3P20264 500 aaPredicted RBP13.16□□□□□ -0.3
HCFC2-202ENST00000544223 AQP4P55087 323 aa13.16□□□□□ -0.3
HCFC2-202ENST00000544223 GRAMD1BQ3KR37 738 aa13.16□□□□□ -0.3
HCFC2-202ENST00000544223 EOGTQ5NDL2 527 aa13.16□□□□□ -0.3
HCFC2-202ENST00000544223 UNC5DQ6UXZ4 953 aa13.16□□□□□ -0.3
HCFC2-202ENST00000544223 Q6ZSR6 202 aa13.16□□□□□ -0.3
HCFC2-202ENST00000544223 GALNT10Q86SR1 603 aa13.16□□□□□ -0.3
HCFC2-202ENST00000544223 OR4E2Q8NGC2 313 aa13.16□□□□□ -0.3
HCFC2-202ENST00000544223 OR52E1Q8NGJ3 308 aa13.16□□□□□ -0.3
HCFC2-202ENST00000544223 DNAJC9Q8WXX5 260 aa13.16□□□□□ -0.3
HCFC2-202ENST00000544223 HLA-CQ95604 372 aa13.16□□□□□ -0.3
HCFC2-202ENST00000544223 BIRC7Q96CA5 298 aa13.16□□□□□ -0.3
HCFC2-202ENST00000544223 ZBTB18Q99592 522 aa13.16□□□□□ -0.3
HCFC2-202ENST00000544223 TMEM121BQ9BXQ6 578 aaPredicted RBP13.16□□□□□ -0.3
HCFC2-202ENST00000544223 REXO4Q9GZR2 422 aaKnown RBP13.16□□□□□ -0.3
HCFC2-202ENST00000544223 TRPV5Q9NQA5 729 aa13.16□□□□□ -0.3
HCFC2-202ENST00000544223 C5AR2Q9P296 337 aa13.16□□□□□ -0.3
HCFC2-202ENST00000544223 FZD4Q9ULV1 537 aa13.16□□□□□ -0.3
HCFC2-202ENST00000544223 WASHC1A8K0Z3 465 aa13.15□□□□□ -0.3
HCFC2-202ENST00000544223 FPGTO14772 594 aa13.15□□□□□ -0.3
HCFC2-202ENST00000544223 KLK1P06870 262 aa13.15□□□□□ -0.3
HCFC2-202ENST00000544223 ABCB1P08183 1280 aaPredicted RBP13.15□□□□□ -0.3
HCFC2-202ENST00000544223 PIM1P11309 404 aaPredicted RBP13.15□□□□□ -0.3
HCFC2-202ENST00000544223 ACTR1BP42025 376 aa13.15□□□□□ -0.3
HCFC2-202ENST00000544223 ACTR1AP61163 376 aa13.15□□□□□ -0.3
HCFC2-202ENST00000544223 GRIK2Q13002 908 aa13.15□□□□□ -0.3
HCFC2-202ENST00000544223 C1orf61Q13536 156 aa13.15□□□□□ -0.3
HCFC2-202ENST00000544223 PRSS53Q2L4Q9 553 aa13.15□□□□□ -0.3
HCFC2-202ENST00000544223 WASH2PQ6VEQ5 465 aa13.15□□□□□ -0.3
HCFC2-202ENST00000544223 FBXO15Q8NCQ5 510 aaPredicted RBP13.15□□□□□ -0.3
HCFC2-202ENST00000544223 OR4K1Q8NGD4 311 aa13.15□□□□□ -0.3
HCFC2-202ENST00000544223 DNASE1L2Q92874 299 aa13.15□□□□□ -0.3
HCFC2-202ENST00000544223 UCN3Q969E3 161 aa13.15□□□□□ -0.3
HCFC2-202ENST00000544223 F2RL3Q96RI0 385 aa13.15□□□□□ -0.3
HCFC2-202ENST00000544223 ABCG4Q9H172 646 aa13.15□□□□□ -0.3
HCFC2-202ENST00000544223 ITM2CQ9NQX7 267 aa13.15□□□□□ -0.3
HCFC2-202ENST00000544223 SNX13Q9Y5W8 968 aa13.15□□□□□ -0.3
HCFC2-202ENST00000544223 CACNA1IQ9P0X4 2223 aa13.15□□□□□ -0.3
HCFC2-202ENST00000544223 KLHL18O94889 574 aa13.15□□□□□ -0.3
HCFC2-202ENST00000544223 CPSF4O95639 269 aaKnown RBP13.15□□□□□ -0.3
HCFC2-202ENST00000544223 SRFP11831 508 aa13.15□□□□□ -0.3
HCFC2-202ENST00000544223 HRH2P25021 359 aa13.15□□□□□ -0.3
HCFC2-202ENST00000544223 S100A3P33764 101 aa13.15□□□□□ -0.3
HCFC2-202ENST00000544223 CLDN8P56748 225 aa13.15□□□□□ -0.3
HCFC2-202ENST00000544223 SNRPNP63162 240 aaKnown RBP13.15□□□□□ -0.3
HCFC2-202ENST00000544223 MAD2L1Q13257 205 aaPredicted RBP13.15□□□□□ -0.3
HCFC2-202ENST00000544223 SMAD2Q15796 467 aaKnown RBP13.15□□□□□ -0.3
HCFC2-202ENST00000544223 RPE65Q16518 533 aa13.15□□□□□ -0.3
HCFC2-202ENST00000544223 ATG9BQ674R7 924 aa13.15□□□□□ -0.3
HCFC2-202ENST00000544223 TMIGD1Q6UXZ0 262 aa13.15□□□□□ -0.3
HCFC2-202ENST00000544223 ZNF551Q7Z340 670 aaPredicted RBP13.15□□□□□ -0.3
HCFC2-202ENST00000544223 COMMD6Q7Z4G1 85 aa13.15□□□□□ -0.3
HCFC2-202ENST00000544223 RIMKLAQ8IXN7 391 aa13.15□□□□□ -0.3
HCFC2-202ENST00000544223 PQLC1Q8N2U9 271 aa13.15□□□□□ -0.3
HCFC2-202ENST00000544223 GALNT4Q8N4A0 578 aa13.15□□□□□ -0.3
HCFC2-202ENST00000544223 FBXL6Q8N531 539 aa13.15□□□□□ -0.3
HCFC2-202ENST00000544223 AMER3Q8N944 861 aa13.15□□□□□ -0.3
HCFC2-202ENST00000544223 JADE3Q92613 823 aa13.15□□□□□ -0.3
HCFC2-202ENST00000544223 SEPHS2Q99611 448 aa13.15□□□□□ -0.3
HCFC2-202ENST00000544223 DMRT3Q9NQL9 472 aa13.15□□□□□ -0.3
HCFC2-202ENST00000544223 MRGBPQ9NV56 204 aa13.15□□□□□ -0.3
HCFC2-202ENST00000544223 ICKQ9UPZ9 632 aa13.15□□□□□ -0.3
HCFC2-202ENST00000544223 EXO1Q9UQ84 846 aaKnown RBP13.15□□□□□ -0.3
HCFC2-202ENST00000544223 DGKBQ9Y6T7 804 aa13.15□□□□□ -0.3
HCFC2-202ENST00000544223 GABRR3A8MPY1 467 aa13.14□□□□□ -0.31
HCFC2-202ENST00000544223 KCNH1O95259 989 aa13.14□□□□□ -0.31
HCFC2-202ENST00000544223 COX7A2P14406 83 aa13.14□□□□□ -0.31
HCFC2-202ENST00000544223 IDSP22304 550 aa13.14□□□□□ -0.31
HCFC2-202ENST00000544223 PTGER1P34995 402 aa13.14□□□□□ -0.31
HCFC2-202ENST00000544223 RPA4Q13156 261 aa13.14□□□□□ -0.31
HCFC2-202ENST00000544223 PWP1Q13610 501 aa13.14□□□□□ -0.31
HCFC2-202ENST00000544223 USP30Q70CQ3 517 aa13.14□□□□□ -0.31
HCFC2-202ENST00000544223 FAM86B1Q8N7N1 296 aa13.14□□□□□ -0.31
HCFC2-202ENST00000544223 TMEM145Q8NBT3 493 aa13.14□□□□□ -0.31
HCFC2-202ENST00000544223 OR2T34Q8NGX1 318 aa13.14□□□□□ -0.31
HCFC2-202ENST00000544223 RPF2Q9H7B2 306 aaKnown RBP13.14□□□□□ -0.31
HCFC2-202ENST00000544223 UTS2RQ9UKP6 389 aa13.14□□□□□ -0.31
HCFC2-202ENST00000544223 SPTBP11277 2137 aa13.14□□□□□ -0.31
HCFC2-202ENST00000544223 STK25O00506 426 aa13.14□□□□□ -0.31
HCFC2-202ENST00000544223 PI15O43692 258 aa13.14□□□□□ -0.31
HCFC2-202ENST00000544223 UGDHO60701 494 aa13.14□□□□□ -0.31
HCFC2-202ENST00000544223 PRAMEF10O60809 474 aa13.14□□□□□ -0.31
HCFC2-202ENST00000544223 FOSL2P15408 326 aa13.14□□□□□ -0.31
HCFC2-202ENST00000544223 HNRNPA2B1P22626 353 aaKnown RBP13.14□□□□□ -0.31
HCFC2-202ENST00000544223 PEBP1P30086 187 aaKnown RBP13.14□□□□□ -0.31
HCFC2-202ENST00000544223 MRPL19P49406 292 aaKnown RBP13.14□□□□□ -0.31
HCFC2-202ENST00000544223 C16orf72Q14CZ0 275 aa13.14□□□□□ -0.31
HCFC2-202ENST00000544223 ALG11Q2TAA5 492 aa13.14□□□□□ -0.31
HCFC2-202ENST00000544223 ZNF385BQ569K4 471 aa13.14□□□□□ -0.31
HCFC2-202ENST00000544223 AAGABQ6PD74 315 aa13.14□□□□□ -0.31
HCFC2-202ENST00000544223 C17orf64Q86WR6 236 aa13.14□□□□□ -0.31
HCFC2-202ENST00000544223 SHISA5Q8N114 240 aa13.14□□□□□ -0.31
HCFC2-202ENST00000544223 DTWD1Q8N5C7 304 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms