RNA–Protein interactions for RNA: ENST00000543727.5

TSFM-208, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TSFM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-208ENST00000543727 PRTGQ2VWP7 1150 aa17.09■□□□□ 0.33
TSFM-208ENST00000543727 PRAMEF17Q5VTA0 474 aa17.09■□□□□ 0.33
TSFM-208ENST00000543727 FRMPD2BQ6IN97 320 aa17.09■□□□□ 0.33
TSFM-208ENST00000543727 PRMT9Q6P2P2 845 aa17.09■□□□□ 0.33
TSFM-208ENST00000543727 CSNK1A1LQ8N752 337 aa17.09■□□□□ 0.33
TSFM-208ENST00000543727 AENQ8WTP8 325 aaKnown RBP17.09■□□□□ 0.33
TSFM-208ENST00000543727 CT55Q8WUE5 264 aa17.09■□□□□ 0.33
TSFM-208ENST00000543727 CAVIN3Q969G5 261 aa17.09■□□□□ 0.33
TSFM-208ENST00000543727 NEIL2Q969S2 332 aa17.09■□□□□ 0.33
TSFM-208ENST00000543727 CATSPER2Q96P56 530 aa17.09■□□□□ 0.33
TSFM-208ENST00000543727 UNKQ9C0B0 810 aaKnown RBP17.09■□□□□ 0.33
TSFM-208ENST00000543727 VPS11Q9H270 941 aa17.09■□□□□ 0.33
TSFM-208ENST00000543727 EHD1Q9H4M9 534 aa17.09■□□□□ 0.33
TSFM-208ENST00000543727 CPNE5Q9HCH3 593 aa17.09■□□□□ 0.33
TSFM-208ENST00000543727 CUTCQ9NTM9 273 aa17.09■□□□□ 0.33
TSFM-208ENST00000543727 WDR70Q9NW82 654 aa17.09■□□□□ 0.33
TSFM-208ENST00000543727 SLC22A14Q9Y267 594 aa17.09■□□□□ 0.33
TSFM-208ENST00000543727 PADI2Q9Y2J8 665 aa17.09■□□□□ 0.33
TSFM-208ENST00000543727 LOC105369274A0A096LPK9 316 aa17.08■□□□□ 0.32
TSFM-208ENST00000543727 LOC102723532A0A0G2JNH3 316 aa17.08■□□□□ 0.32
TSFM-208ENST00000543727 TRBC2A0A5B9 178 aa17.08■□□□□ 0.32
TSFM-208ENST00000543727 HYKKA2RU49 373 aa17.08■□□□□ 0.32
TSFM-208ENST00000543727 NCF1BA6NI72 391 aaPredicted RBP17.08■□□□□ 0.32
TSFM-208ENST00000543727 NCF1CA8MVU1 366 aaPredicted RBP17.08■□□□□ 0.32
TSFM-208ENST00000543727 PRPF4O43172 522 aaKnown RBP eCLIP17.08■□□□□ 0.32
TSFM-208ENST00000543727 STK16O75716 305 aa17.08■□□□□ 0.32
TSFM-208ENST00000543727 NCF1P14598 390 aaPredicted RBP17.08■□□□□ 0.32
TSFM-208ENST00000543727 PTPN4P29074 926 aa17.08■□□□□ 0.32
TSFM-208ENST00000543727 IRF9Q00978 393 aa17.08■□□□□ 0.32
TSFM-208ENST00000543727 CDC16Q13042 620 aa17.08■□□□□ 0.32
TSFM-208ENST00000543727 NDUFA9Q16795 377 aa17.08■□□□□ 0.32
TSFM-208ENST00000543727 SYVN1Q86TM6 617 aa17.08■□□□□ 0.32
TSFM-208ENST00000543727 OR4N4Q8N0Y3 316 aa17.08■□□□□ 0.32
TSFM-208ENST00000543727 CAMKVQ8NCB2 501 aa17.08■□□□□ 0.32
TSFM-208ENST00000543727 STARD8Q92502 1023 aa17.08■□□□□ 0.32
TSFM-208ENST00000543727 FKBP10Q96AY3 582 aa17.08■□□□□ 0.32
TSFM-208ENST00000543727 SEC16BQ96JE7 1060 aa17.08■□□□□ 0.32
TSFM-208ENST00000543727 GPR78Q96P69 363 aa17.08■□□□□ 0.32
TSFM-208ENST00000543727 AIF1LQ9BQI0 150 aa17.08■□□□□ 0.32
TSFM-208ENST00000543727 TMEM79Q9BSE2 394 aa17.08■□□□□ 0.32
TSFM-208ENST00000543727 CHST8Q9H2A9 424 aa17.08■□□□□ 0.32
TSFM-208ENST00000543727 DNAJC11Q9NVH1 559 aa17.08■□□□□ 0.32
TSFM-208ENST00000543727 RAB21Q9UL25 225 aa17.08■□□□□ 0.32
TSFM-208ENST00000543727 CDC14AQ9UNH5 594 aa17.08■□□□□ 0.32
TSFM-208ENST00000543727 NUP210LQ5VU65 1888 aa17.07■□□□□ 0.32
TSFM-208ENST00000543727 SUPT3HB4E1H0 165 aa17.07■□□□□ 0.32
TSFM-208ENST00000543727 KLK8O60259 260 aa17.07■□□□□ 0.32
TSFM-208ENST00000543727 NRP2O60462 931 aa17.07■□□□□ 0.32
TSFM-208ENST00000543727 CDH16O75309 829 aa17.07■□□□□ 0.32
TSFM-208ENST00000543727 SUPT3HO75486 399 aa17.07■□□□□ 0.32
TSFM-208ENST00000543727 ALBP02768 609 aa17.07■□□□□ 0.32
TSFM-208ENST00000543727 ITGB2P05107 769 aa17.07■□□□□ 0.32
TSFM-208ENST00000543727 NUDT17P0C025 328 aa17.07■□□□□ 0.32
TSFM-208ENST00000543727 SLC35G6P0C7Q6 338 aa17.07■□□□□ 0.32
TSFM-208ENST00000543727 AHRP35869 848 aa17.07■□□□□ 0.32
TSFM-208ENST00000543727 ALDH18A1P54886 795 aaKnown RBP17.07■□□□□ 0.32
TSFM-208ENST00000543727 RHDQ02161 417 aa17.07■□□□□ 0.32
TSFM-208ENST00000543727 FAM53BQ14153 422 aa17.07■□□□□ 0.32
TSFM-208ENST00000543727 NCF4Q15080 339 aa17.07■□□□□ 0.32
TSFM-208ENST00000543727 ERCC6LQ2NKX8 1250 aa17.07■□□□□ 0.32
TSFM-208ENST00000543727 NKAIN1Q4KMZ8 207 aa17.07■□□□□ 0.32
TSFM-208ENST00000543727 TECRLQ5HYJ1 363 aa17.07■□□□□ 0.32
TSFM-208ENST00000543727 ARHGAP40Q5TG30 622 aa17.07■□□□□ 0.32
TSFM-208ENST00000543727 C19orf48Q6RUI8 117 aa17.07■□□□□ 0.32
TSFM-208ENST00000543727 NXPE4Q6UWF7 544 aa17.07■□□□□ 0.32
TSFM-208ENST00000543727 FAM198BQ6UWH4 519 aa17.07■□□□□ 0.32
TSFM-208ENST00000543727 RIBC1Q8N443 379 aaPredicted RBP17.07■□□□□ 0.32
TSFM-208ENST00000543727 MFSD9Q8NBP5 474 aa17.07■□□□□ 0.32
TSFM-208ENST00000543727 TTLQ8NG68 377 aa17.07■□□□□ 0.32
TSFM-208ENST00000543727 CD244Q9BZW8 370 aa17.07■□□□□ 0.32
TSFM-208ENST00000543727 DHCR7Q9UBM7 475 aaKnown RBP17.07■□□□□ 0.32
TSFM-208ENST00000543727 LHX6Q9UPM6 363 aa17.07■□□□□ 0.32
TSFM-208ENST00000543727 SH2B3Q9UQQ2 575 aa17.07■□□□□ 0.32
TSFM-208ENST00000543727 FARSAQ9Y285 508 aaKnown RBP17.07■□□□□ 0.32
TSFM-208ENST00000543727 TNPO3Q9Y5L0 923 aaKnown RBP17.07■□□□□ 0.32
TSFM-208ENST00000543727 CLGNO14967 610 aa17.06■□□□□ 0.32
TSFM-208ENST00000543727 TAPBPO15533 448 aa17.06■□□□□ 0.32
TSFM-208ENST00000543727 RFPL1O75677 317 aa17.06■□□□□ 0.32
TSFM-208ENST00000543727 EIF2S1P05198 315 aaKnown RBP17.06■□□□□ 0.32
TSFM-208ENST00000543727 GSTA1P08263 222 aa17.06■□□□□ 0.32
TSFM-208ENST00000543727 MTHFD2P13995 350 aa17.06■□□□□ 0.32
TSFM-208ENST00000543727 HSD17B3P37058 310 aa17.06■□□□□ 0.32
TSFM-208ENST00000543727 KCNC1P48547 511 aa17.06■□□□□ 0.32
TSFM-208ENST00000543727 PIK3CGP48736 1102 aa17.06■□□□□ 0.32
TSFM-208ENST00000543727 REEP5Q00765 189 aa17.06■□□□□ 0.32
TSFM-208ENST00000543727 PCDH1Q08174 1060 aa17.06■□□□□ 0.32
TSFM-208ENST00000543727 PWP1Q13610 501 aa17.06■□□□□ 0.32
TSFM-208ENST00000543727 SETDB1Q15047 1291 aa17.06■□□□□ 0.32
TSFM-208ENST00000543727 PDK4Q16654 411 aa17.06■□□□□ 0.32
TSFM-208ENST00000543727 ATG9BQ674R7 924 aa17.06■□□□□ 0.32
TSFM-208ENST00000543727 NIPAL1Q6NVV3 410 aa17.06■□□□□ 0.32
TSFM-208ENST00000543727 TTLL10Q6ZVT0 673 aa17.06■□□□□ 0.32
TSFM-208ENST00000543727 TMPRSS11BQ86T26 416 aa17.06■□□□□ 0.32
TSFM-208ENST00000543727 MREGQ8N565 214 aa17.06■□□□□ 0.32
TSFM-208ENST00000543727 WDR34Q96EX3 536 aa17.06■□□□□ 0.32
TSFM-208ENST00000543727 MRPL57Q9BQC6 102 aaKnown RBP17.06■□□□□ 0.32
TSFM-208ENST00000543727 ACTL8Q9H568 366 aa17.06■□□□□ 0.32
TSFM-208ENST00000543727 WDR54Q9H977 334 aa17.06■□□□□ 0.32
TSFM-208ENST00000543727 COPG2Q9UBF2 871 aa17.06■□□□□ 0.32
TSFM-208ENST00000543727 NDOR1Q9UHB4 597 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms