RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 MED11Q9P086 117 aa18.82■□□□□ 0.6
SUDS3-204ENST00000543473 SLC22A14Q9Y267 594 aa18.82■□□□□ 0.6
SUDS3-204ENST00000543473 PLOD2O00469 737 aa18.82■□□□□ 0.6
SUDS3-204ENST00000543473 ATE1O95260 518 aa18.82■□□□□ 0.6
SUDS3-204ENST00000543473 ADAM15Q13444 863 aa18.82■□□□□ 0.6
SUDS3-204ENST00000543473 LDLRAD1Q5T700 205 aa18.82■□□□□ 0.6
SUDS3-204ENST00000543473 HLA-DQA1Q5Y7H0 255 aa18.82■□□□□ 0.6
SUDS3-204ENST00000543473 FAM110BQ8TC76 370 aa18.82■□□□□ 0.6
SUDS3-204ENST00000543473 SMG7Q92540 1137 aaKnown RBP18.82■□□□□ 0.6
SUDS3-204ENST00000543473 SLC9A6Q92581 669 aa18.82■□□□□ 0.6
SUDS3-204ENST00000543473 HTATIP2Q9BUP3 242 aa18.82■□□□□ 0.6
SUDS3-204ENST00000543473 FAM120CQ9NX05 1096 aaKnown RBP18.82■□□□□ 0.6
SUDS3-204ENST00000543473 IKZF2Q9UKS7 526 aa18.82■□□□□ 0.6
SUDS3-204ENST00000543473 HCN4Q9Y3Q4 1203 aa18.82■□□□□ 0.6
SUDS3-204ENST00000543473 GRIP1Q9Y3R0 1128 aa18.82■□□□□ 0.6
SUDS3-204ENST00000543473 IRS2Q9Y4H2 1338 aa18.82■□□□□ 0.6
SUDS3-204ENST00000543473 TLX2O43763 284 aaPredicted RBP18.82■□□□□ 0.6
SUDS3-204ENST00000543473 KDM4BO94953 1096 aa18.82■□□□□ 0.6
SUDS3-204ENST00000543473 GSTT2P0CG29 244 aa18.82■□□□□ 0.6
SUDS3-204ENST00000543473 GSTT2BP0CG30 244 aa18.82■□□□□ 0.6
SUDS3-204ENST00000543473 XKRXQ6PP77 449 aa18.82■□□□□ 0.6
SUDS3-204ENST00000543473 LINGO2Q7L985 606 aa18.82■□□□□ 0.6
SUDS3-204ENST00000543473 SLC30A8Q8IWU4 369 aa18.82■□□□□ 0.6
SUDS3-204ENST00000543473 S100A13Q99584 98 aa18.82■□□□□ 0.6
SUDS3-204ENST00000543473 MLXQ9UH92 298 aa18.82■□□□□ 0.6
SUDS3-204ENST00000543473 UBR2Q8IWV8 1755 aa18.81■□□□□ 0.6
SUDS3-204ENST00000543473 OR10H2O60403 315 aa18.81■□□□□ 0.6
SUDS3-204ENST00000543473 HLA-DPB1P04440 258 aa18.81■□□□□ 0.6
SUDS3-204ENST00000543473 SH3BP2P78314 561 aa18.81■□□□□ 0.6
SUDS3-204ENST00000543473 RTL4Q6ZR62 310 aa18.81■□□□□ 0.6
SUDS3-204ENST00000543473 CFAP206Q8IYR0 622 aa18.81■□□□□ 0.6
SUDS3-204ENST00000543473 ALPK1Q96QP1 1244 aa18.81■□□□□ 0.6
SUDS3-204ENST00000543473 C1QTNF1Q9BXJ1 281 aa18.81■□□□□ 0.6
SUDS3-204ENST00000543473 DPAGT1Q9H3H5 408 aa18.81■□□□□ 0.6
SUDS3-204ENST00000543473 DNAJC27Q9NZQ0 273 aa18.81■□□□□ 0.6
SUDS3-204ENST00000543473 OR14I1A6ND48 311 aa18.81■□□□□ 0.6
SUDS3-204ENST00000543473 INMT-MINDY4F8WBC2 141 aa18.81■□□□□ 0.6
SUDS3-204ENST00000543473 CNTN5O94779 1100 aa18.81■□□□□ 0.6
SUDS3-204ENST00000543473 MATN1P21941 496 aa18.81■□□□□ 0.6
SUDS3-204ENST00000543473 DSTNP60981 165 aa18.81■□□□□ 0.6
SUDS3-204ENST00000543473 TLE2Q04725 743 aa18.81■□□□□ 0.6
SUDS3-204ENST00000543473 ALDH16A1Q8IZ83 802 aa18.81■□□□□ 0.6
SUDS3-204ENST00000543473 TMEM80Q96HE8 168 aa18.81■□□□□ 0.6
SUDS3-204ENST00000543473 VILLO15195 856 aa18.81■□□□□ 0.6
SUDS3-204ENST00000543473 SOX14O95416 240 aa18.81■□□□□ 0.6
SUDS3-204ENST00000543473 FAM163BP0C2L3 166 aa18.81■□□□□ 0.6
SUDS3-204ENST00000543473 HNMTP50135 292 aa18.81■□□□□ 0.6
SUDS3-204ENST00000543473 CLEC12AQ5QGZ9 265 aa18.81■□□□□ 0.6
SUDS3-204ENST00000543473 C10orf62Q5T681 223 aaPredicted RBP18.81■□□□□ 0.6
SUDS3-204ENST00000543473 SLC7A5P1Q8MH63 180 aa18.81■□□□□ 0.6
SUDS3-204ENST00000543473 KCNJ9Q92806 393 aa18.81■□□□□ 0.6
SUDS3-204ENST00000543473 SMOC2Q9H3U7 446 aa18.81■□□□□ 0.6
SUDS3-204ENST00000543473 CCDC88AQ3V6T2 1871 aa18.81■□□□□ 0.6
SUDS3-204ENST00000543473 COL2A1P02458 1487 aaPredicted RBP18.81■□□□□ 0.6
SUDS3-204ENST00000543473 SAP18O00422 153 aaKnown RBP18.8■□□□□ 0.6
SUDS3-204ENST00000543473 STOMP27105 288 aa18.8■□□□□ 0.6
SUDS3-204ENST00000543473 SEMG2Q02383 582 aa18.8■□□□□ 0.6
SUDS3-204ENST00000543473 HNRNPA0Q13151 305 aaKnown RBP18.8■□□□□ 0.6
SUDS3-204ENST00000543473 LRRC70Q7Z2Q7 622 aa18.8■□□□□ 0.6
SUDS3-204ENST00000543473 LYSMD3Q7Z3D4 306 aa18.8■□□□□ 0.6
SUDS3-204ENST00000543473 AMIGO1Q86WK6 493 aa18.8■□□□□ 0.6
SUDS3-204ENST00000543473 GHDCQ8N2G8 530 aa18.8■□□□□ 0.6
SUDS3-204ENST00000543473 KCNH6Q9H252 994 aa18.8■□□□□ 0.6
SUDS3-204ENST00000543473 ERVK13-1Q9NX77 482 aa18.8■□□□□ 0.6
SUDS3-204ENST00000543473 TMEM181Q9P2C4 612 aa18.8■□□□□ 0.6
SUDS3-204ENST00000543473 ANKRD66B4E2M5 251 aa18.8■□□□□ 0.6
SUDS3-204ENST00000543473 PTTG1O95997 202 aa18.8■□□□□ 0.6
SUDS3-204ENST00000543473 IL7P13232 177 aa18.8■□□□□ 0.6
SUDS3-204ENST00000543473 EIF2B5Q13144 721 aaKnown RBP18.8■□□□□ 0.6
SUDS3-204ENST00000543473 ATP13A5Q4VNC0 1218 aa18.8■□□□□ 0.6
SUDS3-204ENST00000543473 PRSS55Q6UWB4 352 aaPredicted RBP18.8■□□□□ 0.6
SUDS3-204ENST00000543473 TAF8Q7Z7C8 310 aa18.8■□□□□ 0.6
SUDS3-204ENST00000543473 TP53INP2Q8IXH6 220 aa18.8■□□□□ 0.6
SUDS3-204ENST00000543473 ARFGAP1Q8N6T3 406 aa18.8■□□□□ 0.6
SUDS3-204ENST00000543473 FAM46DQ8NEK8 389 aa18.8■□□□□ 0.6
SUDS3-204ENST00000543473 SLC35G5Q96KT7 338 aa18.8■□□□□ 0.6
SUDS3-204ENST00000543473 FERD3LQ96RJ6 166 aa18.8■□□□□ 0.6
SUDS3-204ENST00000543473 MGLLQ99685 303 aa18.8■□□□□ 0.6
SUDS3-204ENST00000543473 TMEM27Q9HBJ8 222 aa18.8■□□□□ 0.6
SUDS3-204ENST00000543473 S1PR4O95977 384 aa18.8■□□□□ 0.6
SUDS3-204ENST00000543473 DNTTP04053 509 aa18.8■□□□□ 0.6
SUDS3-204ENST00000543473 SKP1P63208 163 aa18.8■□□□□ 0.6
SUDS3-204ENST00000543473 ZNF267Q14586 743 aaPredicted RBP18.8■□□□□ 0.6
SUDS3-204ENST00000543473 MFSD2AQ8NA29 543 aa18.8■□□□□ 0.6
SUDS3-204ENST00000543473 ZBED6CLQ96FA7 236 aaPredicted RBP18.8■□□□□ 0.6
SUDS3-204ENST00000543473 MRGPRX2Q96LB1 330 aa18.8■□□□□ 0.6
SUDS3-204ENST00000543473 TBX5Q99593 518 aa18.8■□□□□ 0.6
SUDS3-204ENST00000543473 CFAP97Q9P2B7 532 aa18.8■□□□□ 0.6
SUDS3-204ENST00000543473 ANKRD12Q6UB98 2062 aa18.8■□□□□ 0.6
SUDS3-204ENST00000543473 NHSL1Q5SYE7 1610 aa18.8■□□□□ 0.6
SUDS3-204ENST00000543473 PDPK1O15530 556 aa18.8■□□□□ 0.6
SUDS3-204ENST00000543473 RPL6Q02878 288 aaKnown RBP18.8■□□□□ 0.6
SUDS3-204ENST00000543473 RGS1Q08116 209 aa18.8■□□□□ 0.6
SUDS3-204ENST00000543473 FRRS1Q6ZNA5 592 aa18.8■□□□□ 0.6
SUDS3-204ENST00000543473 ZNF367Q7RTV3 350 aa18.8■□□□□ 0.6
SUDS3-204ENST00000543473 NFKBIDQ8NI38 313 aa18.8■□□□□ 0.6
SUDS3-204ENST00000543473 SH3YL1Q96HL8 342 aaPredicted RBP18.8■□□□□ 0.6
SUDS3-204ENST00000543473 FUBP3Q96I24 572 aaKnown RBP eCLIP18.8■□□□□ 0.6
SUDS3-204ENST00000543473 HEMK1Q9Y5R4 338 aaPredicted RBP18.8■□□□□ 0.6
SUDS3-204ENST00000543473 A0A0U1RQF3 1178 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms