RNA–Protein interactions for RNA: ENST00000542663.1

CLSTN3-214, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-214ENST00000542663 NAP1L1P55209 391 aaKnown RBP16.83■□□□□ 0.28
CLSTN3-214ENST00000542663 EIF3BP55884 814 aaKnown RBP16.83■□□□□ 0.28
CLSTN3-214ENST00000542663 TLE4Q04727 773 aa16.83■□□□□ 0.28
CLSTN3-214ENST00000542663 FAM53BQ14153 422 aa16.83■□□□□ 0.28
CLSTN3-214ENST00000542663 ICE2Q659A1 982 aa16.83■□□□□ 0.28
CLSTN3-214ENST00000542663 CPEB2Q7Z5Q1 589 aaKnown RBP16.83■□□□□ 0.28
CLSTN3-214ENST00000542663 PRUNE1Q86TP1 453 aa16.83■□□□□ 0.28
CLSTN3-214ENST00000542663 CRLF3Q8IUI8 442 aa16.83■□□□□ 0.28
CLSTN3-214ENST00000542663 SIAH3Q8IW03 269 aa16.83■□□□□ 0.28
CLSTN3-214ENST00000542663 SMPDL3AQ92484 453 aa16.83■□□□□ 0.28
CLSTN3-214ENST00000542663 PHF3Q92576 2039 aaKnown RBP16.83■□□□□ 0.28
CLSTN3-214ENST00000542663 ZNF354BQ96LW1 612 aa16.83■□□□□ 0.28
CLSTN3-214ENST00000542663 CYTH2Q99418 400 aa16.83■□□□□ 0.28
CLSTN3-214ENST00000542663 TREX2Q9BQ50 279 aaPredicted RBP16.83■□□□□ 0.28
CLSTN3-214ENST00000542663 MCCC2Q9HCC0 563 aa16.83■□□□□ 0.28
CLSTN3-214ENST00000542663 GPAMQ9HCL2 828 aa16.83■□□□□ 0.28
CLSTN3-214ENST00000542663 TREX1Q9NSU2 369 aa16.83■□□□□ 0.28
CLSTN3-214ENST00000542663 ANKRD10Q9NXR5 420 aa16.83■□□□□ 0.28
CLSTN3-214ENST00000542663 TAC3Q9UHF0 121 aa16.83■□□□□ 0.28
CLSTN3-214ENST00000542663 PCYOX1Q9UHG3 505 aa16.83■□□□□ 0.28
CLSTN3-214ENST00000542663 INTS1Q8N201 2190 aaKnown RBP16.82■□□□□ 0.28
CLSTN3-214ENST00000542663 OR2W5A6NFC9 320 aa16.82■□□□□ 0.28
CLSTN3-214ENST00000542663 NPIPA5E9PKD4 350 aa16.82■□□□□ 0.28
CLSTN3-214ENST00000542663 MYO1CO00159 1063 aa16.82■□□□□ 0.28
CLSTN3-214ENST00000542663 NIPSNAP2O75323 286 aa16.82■□□□□ 0.28
CLSTN3-214ENST00000542663 RPA3P35244 121 aaPredicted RBP16.82■□□□□ 0.28
CLSTN3-214ENST00000542663 FDFT1P37268 417 aa16.82■□□□□ 0.28
CLSTN3-214ENST00000542663 ALDH6A1Q02252 535 aaKnown RBP16.82■□□□□ 0.28
CLSTN3-214ENST00000542663 PRDX1Q06830 199 aaKnown RBP16.82■□□□□ 0.28
CLSTN3-214ENST00000542663 OR1C1Q15619 314 aa16.82■□□□□ 0.28
CLSTN3-214ENST00000542663 OASLQ15646 514 aaKnown RBP16.82■□□□□ 0.28
CLSTN3-214ENST00000542663 ANKRD20A4Q4UJ75 823 aa16.82■□□□□ 0.28
CLSTN3-214ENST00000542663 SPINK14Q6IE38 97 aa16.82■□□□□ 0.28
CLSTN3-214ENST00000542663 PRSS41Q7RTY9 318 aa16.82■□□□□ 0.28
CLSTN3-214ENST00000542663 LRRC6Q86X45 466 aa16.82■□□□□ 0.28
CLSTN3-214ENST00000542663 PPHLN1Q8NEY8 458 aaKnown RBP16.82■□□□□ 0.28
CLSTN3-214ENST00000542663 OR9A4Q8NGU2 314 aa16.82■□□□□ 0.28
CLSTN3-214ENST00000542663 METTL21AQ8WXB1 218 aa16.82■□□□□ 0.28
CLSTN3-214ENST00000542663 RERGQ96A58 199 aaPredicted RBP16.82■□□□□ 0.28
CLSTN3-214ENST00000542663 TRIM51Q9BSJ1 452 aa16.82■□□□□ 0.28
CLSTN3-214ENST00000542663 GALPQ9UBC7 116 aa16.82■□□□□ 0.28
CLSTN3-214ENST00000542663 NPIPA1Q9UND3 350 aa16.82■□□□□ 0.28
CLSTN3-214ENST00000542663 EPN1Q9Y6I3 576 aaPredicted RBP16.82■□□□□ 0.28
CLSTN3-214ENST00000542663 SOWAHDA6NJG2 315 aa16.81■□□□□ 0.28
CLSTN3-214ENST00000542663 TXNDC9O14530 226 aa16.81■□□□□ 0.28
CLSTN3-214ENST00000542663 ADAM10O14672 748 aa16.81■□□□□ 0.28
CLSTN3-214ENST00000542663 HAT1O14929 419 aa16.81■□□□□ 0.28
CLSTN3-214ENST00000542663 PSIP1O75475 530 aaKnown RBP16.81■□□□□ 0.28
CLSTN3-214ENST00000542663 NDUFS3O75489 264 aa16.81■□□□□ 0.28
CLSTN3-214ENST00000542663 STATHP02808 62 aa16.81■□□□□ 0.28
CLSTN3-214ENST00000542663 PKMP14618 531 aaKnown RBP16.81■□□□□ 0.28
CLSTN3-214ENST00000542663 ETS1P14921 441 aa16.81■□□□□ 0.28
CLSTN3-214ENST00000542663 EEF1DP29692 281 aaKnown RBP16.81■□□□□ 0.28
CLSTN3-214ENST00000542663 ATP5DP30049 168 aa16.81■□□□□ 0.28
CLSTN3-214ENST00000542663 STIP1P31948 543 aaKnown RBP16.81■□□□□ 0.28
CLSTN3-214ENST00000542663 CSNK1G2P78368 415 aa16.81■□□□□ 0.28
CLSTN3-214ENST00000542663 CRADDP78560 199 aa16.81■□□□□ 0.28
CLSTN3-214ENST00000542663 HSF1Q00613 529 aa16.81■□□□□ 0.28
CLSTN3-214ENST00000542663 RELAQ04206 551 aa16.81■□□□□ 0.28
CLSTN3-214ENST00000542663 TSTA3Q13630 321 aaPredicted RBP16.81■□□□□ 0.28
CLSTN3-214ENST00000542663 ANKRD37Q7Z713 158 aa16.81■□□□□ 0.28
CLSTN3-214ENST00000542663 PLD3Q8IV08 490 aa16.81■□□□□ 0.28
CLSTN3-214ENST00000542663 MPP5Q8N3R9 675 aa16.81■□□□□ 0.28
CLSTN3-214ENST00000542663 PPFIBP2Q8ND30 876 aa16.81■□□□□ 0.28
CLSTN3-214ENST00000542663 AGAP11Q8TF27 550 aa16.81■□□□□ 0.28
CLSTN3-214ENST00000542663 PHF10Q8WUB8 498 aaKnown RBP16.81■□□□□ 0.28
CLSTN3-214ENST00000542663 FAM136AQ96C01 138 aa16.81■□□□□ 0.28
CLSTN3-214ENST00000542663 DMRTA2Q96SC8 542 aa16.81■□□□□ 0.28
CLSTN3-214ENST00000542663 KCNK13Q9HB14 408 aa16.81■□□□□ 0.28
CLSTN3-214ENST00000542663 AMFRQ9UKV5 643 aa16.81■□□□□ 0.28
CLSTN3-214ENST00000542663 E7EVH7 732 aa16.8■□□□□ 0.28
CLSTN3-214ENST00000542663 ASNA1O43681 348 aa16.8■□□□□ 0.28
CLSTN3-214ENST00000542663 CYC1P08574 325 aa16.8■□□□□ 0.28
CLSTN3-214ENST00000542663 ARNTP27540 789 aa16.8■□□□□ 0.28
CLSTN3-214ENST00000542663 NMBRP28336 390 aa16.8■□□□□ 0.28
CLSTN3-214ENST00000542663 FMO4P31512 558 aa16.8■□□□□ 0.28
CLSTN3-214ENST00000542663 AVPR1BP47901 424 aa16.8■□□□□ 0.28
CLSTN3-214ENST00000542663 PNLIPRP1P54315 467 aa16.8■□□□□ 0.28
CLSTN3-214ENST00000542663 ARHGAP19Q14CB8 494 aa16.8■□□□□ 0.28
CLSTN3-214ENST00000542663 MEP1AQ16819 746 aa16.8■□□□□ 0.28
CLSTN3-214ENST00000542663 MINDY4Q4G0A6 757 aa16.8■□□□□ 0.28
CLSTN3-214ENST00000542663 PCID2Q5JVF3 399 aa16.8■□□□□ 0.28
CLSTN3-214ENST00000542663 C3P1Q6ZMU1 363 aa16.8■□□□□ 0.28
CLSTN3-214ENST00000542663 PEX26Q7Z412 305 aa16.8■□□□□ 0.28
CLSTN3-214ENST00000542663 GALNTL5Q7Z4T8 443 aa16.8■□□□□ 0.28
CLSTN3-214ENST00000542663 FGD2Q7Z6J4 655 aa16.8■□□□□ 0.28
CLSTN3-214ENST00000542663 DOLPP1Q86YN1 238 aa16.8■□□□□ 0.28
CLSTN3-214ENST00000542663 CHTF18Q8WVB6 975 aa16.8■□□□□ 0.28
CLSTN3-214ENST00000542663 LPGAT1Q92604 370 aa16.8■□□□□ 0.28
CLSTN3-214ENST00000542663 POM121Q96HA1 1249 aa16.8■□□□□ 0.28
CLSTN3-214ENST00000542663 PKP4Q99569 1192 aa16.8■□□□□ 0.28
CLSTN3-214ENST00000542663 UTP23Q9BRU9 249 aaKnown RBP16.8■□□□□ 0.28
CLSTN3-214ENST00000542663 RAB6BQ9NRW1 208 aa16.8■□□□□ 0.28
CLSTN3-214ENST00000542663 NEU2Q9Y3R4 380 aa16.8■□□□□ 0.28
CLSTN3-214ENST00000542663 ZNF469Q96JG9 3925 aaPredicted RBP16.8■□□□□ 0.28
CLSTN3-214ENST00000542663 E7ENX8 843 aa16.79■□□□□ 0.28
CLSTN3-214ENST00000542663 H0YIG0 161 aa16.79■□□□□ 0.28
CLSTN3-214ENST00000542663 LIASO43766 372 aa16.79■□□□□ 0.28
CLSTN3-214ENST00000542663 NEURL1O76050 574 aa16.79■□□□□ 0.28
CLSTN3-214ENST00000542663 NSA2O95478 260 aaKnown RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms