RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 AASDHPPTQ9NRN7 309 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 ABCB8Q9NUT2 735 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 ARL15Q9NXU5 204 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 GPRC5BQ9NZH0 403 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 SRRDQ9UH36 339 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 INTS6Q9UL03 887 aaKnown RBP5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 TMPRSS11EQ9UL52 423 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 NDRG4Q9ULP0 352 aaKnown RBP5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 ABCG2Q9UNQ0 655 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 ORC6Q9Y5N6 252 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 KCNMB2Q9Y691 235 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 AP1M2Q9Y6Q5 423 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 CLDN25C9JDP6 229 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 RFXANKO14593 260 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 SLC22A1O15245 554 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 XPNPEP2O43895 674 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 UGDHO60701 494 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 XYLBO75191 536 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 SERPINB7O75635 380 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 ANGPTL1O95841 491 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 IGSF6O95976 241 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 C1QCP02747 245 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 CXCL10P02778 98 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 SOD2P04179 222 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 JUPP14923 745 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 EFNA1P20827 205 aaPredicted RBP5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 PRPS1L1P21108 318 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 FPR1P21462 350 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 LHCGRP22888 699 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 SERPINA4P29622 427 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 HOXA9P31269 272 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 KDELR2P33947 212 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 KIR3DL1P43629 444 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 MASP1P48740 699 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 NEK2P51955 445 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 PTSQ03393 145 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 MVKQ03426 396 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 SRSF11Q05519 484 aaKnown RBP5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 LMAN2Q12907 356 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 PPP1R8Q12972 351 aaKnown RBP5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 CSTF3Q12996 717 aaKnown RBP5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 RAB33AQ14088 237 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 VEZF1Q14119 521 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 VEPH1Q14D04 833 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 OXA1LQ15070 435 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 NPTX1Q15818 432 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 UGT8Q16880 541 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 RGS21Q2M5E4 152 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 PTCHD3Q3KNS1 767 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 ATP13A5Q4VNC0 1218 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 PLEKHS1Q5SXH7 462 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 ZDHHC20Q5W0Z9 365 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 FRG2Q64ET8 278 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 OR4F3Q6IEY1 312 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 NOXRED1Q6NXP6 359 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 FAHD1Q6P587 224 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 DOK6Q6PKX4 331 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 NEK10Q6ZWH5 1172 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 HTR3DQ70Z44 454 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 UBE2R2Q712K3 238 aaPredicted RBP5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 CBLL1Q75N03 491 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 EIF3MQ7L2H7 374 aaKnown RBP5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 PRSS48Q7RTY5 328 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 TSPYL5Q86VY4 417 aaPredicted RBP5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 ANKRD46Q86W74 232 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 KLHDC8AQ8IYD2 350 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 TCEAL8Q8IYN2 117 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 MFSD4AQ8N468 514 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 ZBTB8BQ8NAP8 495 aaPredicted RBP5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 OR2AP1Q8NGE2 309 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 OR8J2Q8NGG1 315 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 FIBINQ8TAL6 211 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 CNIH3Q8TBE1 160 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 MCOLN3Q8TDD5 553 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 CSGALNACT1Q8TDX6 532 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 NELL1Q92832 810 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 MTFMTQ96DP5 389 aaKnown RBP5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 METTL2AQ96IZ6 378 aaKnown RBP5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 EGLN2Q96KS0 407 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 SPACA7Q96KW9 195 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 ZNF641Q96N77 438 aaPredicted RBP5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 TSSK3Q96PN8 268 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 FRG2BQ96QU4 278 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 ZNF300Q96RE9 604 aaPredicted RBP5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 COPS8Q99627 209 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 FAM83CQ9BQN1 747 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 NEURL2Q9BR09 285 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 SPATA9Q9BWV2 254 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 BTBD2Q9BX70 525 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 DGCR6LQ9BY27 220 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 MROQ9BYG7 248 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 CHST8Q9H2A9 424 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 CHRDQ9H2X0 955 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 ELOVL6Q9H5J4 265 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 ZFAND3Q9H8U3 227 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 ZNF334Q9HCZ1 680 aaPredicted RBP5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 FBXO8Q9NRD0 319 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 EXD2Q9NVH0 621 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 DNAJC11Q9NVH1 559 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 SPATA6Q9NWH7 488 aaPredicted RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms