RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 Q0VFX4 171 aa14.85□□□□□ -0.03
VPS33A-206ENST00000542310 ZNF169Q14929 603 aaPredicted RBP14.85□□□□□ -0.03
VPS33A-206ENST00000542310 TLR1Q15399 786 aa14.85□□□□□ -0.03
VPS33A-206ENST00000542310 VWA2Q5GFL6 755 aa14.85□□□□□ -0.03
VPS33A-206ENST00000542310 RIPOR1Q6ZS17 1223 aa14.85□□□□□ -0.03
VPS33A-206ENST00000542310 NDUFAF7Q7L592 441 aa14.85□□□□□ -0.03
VPS33A-206ENST00000542310 PARP9Q8IXQ6 854 aa14.85□□□□□ -0.03
VPS33A-206ENST00000542310 KBTBD2Q8IY47 623 aa14.85□□□□□ -0.03
VPS33A-206ENST00000542310 CISD2Q8N5K1 135 aaKnown RBP14.85□□□□□ -0.03
VPS33A-206ENST00000542310 MCOLN3Q8TDD5 553 aa14.85□□□□□ -0.03
VPS33A-206ENST00000542310 MMABQ96EY8 250 aaPredicted RBP14.85□□□□□ -0.03
VPS33A-206ENST00000542310 RUNDC3BQ96NL0 473 aa14.85□□□□□ -0.03
VPS33A-206ENST00000542310 LMF1Q96S06 567 aa14.85□□□□□ -0.03
VPS33A-206ENST00000542310 FAM129AQ9BZQ8 928 aa14.85□□□□□ -0.03
VPS33A-206ENST00000542310 ZNF160Q9HCG1 818 aa14.85□□□□□ -0.03
VPS33A-206ENST00000542310 RIC8BQ9NVN3 520 aa14.85□□□□□ -0.03
VPS33A-206ENST00000542310 DOPEY1Q5JWR5 2465 aa14.85□□□□□ -0.03
VPS33A-206ENST00000542310 POLEQ07864 2286 aa14.84□□□□□ -0.03
VPS33A-206ENST00000542310 IGHV1-45A0A0A0MS14 117 aa14.84□□□□□ -0.03
VPS33A-206ENST00000542310 H0YIG0 161 aa14.84□□□□□ -0.03
VPS33A-206ENST00000542310 NSA2O95478 260 aaKnown RBP14.84□□□□□ -0.03
VPS33A-206ENST00000542310 CXCR2P25025 360 aa14.84□□□□□ -0.03
VPS33A-206ENST00000542310 SOX11P35716 441 aa14.84□□□□□ -0.03
VPS33A-206ENST00000542310 EMP2P54851 167 aa14.84□□□□□ -0.03
VPS33A-206ENST00000542310 TIAL1Q01085 375 aaKnown RBP eCLIP14.84□□□□□ -0.03
VPS33A-206ENST00000542310 MORF4L2Q15014 288 aa14.84□□□□□ -0.03
VPS33A-206ENST00000542310 HIF1AQ16665 826 aa14.84□□□□□ -0.03
VPS33A-206ENST00000542310 SYDE1Q6ZW31 735 aaPredicted RBP14.84□□□□□ -0.03
VPS33A-206ENST00000542310 ZC3H7AQ8IWR0 971 aaKnown RBP14.84□□□□□ -0.03
VPS33A-206ENST00000542310 PALM2Q8IXS6 379 aa14.84□□□□□ -0.03
VPS33A-206ENST00000542310 PRSS58Q8IYP2 241 aa14.84□□□□□ -0.03
VPS33A-206ENST00000542310 MYO1HQ8N1T3 1032 aa14.84□□□□□ -0.03
VPS33A-206ENST00000542310 ST6GALNAC3Q8NDV1 305 aa14.84□□□□□ -0.03
VPS33A-206ENST00000542310 CERS2Q96G23 380 aa14.84□□□□□ -0.03
VPS33A-206ENST00000542310 DDX47Q9H0S4 455 aaKnown RBP14.84□□□□□ -0.03
VPS33A-206ENST00000542310 PARVBQ9HBI1 364 aa14.84□□□□□ -0.03
VPS33A-206ENST00000542310 PDE10AQ9Y233 779 aa14.84□□□□□ -0.03
VPS33A-206ENST00000542310 CSAG2Q9Y5P2 127 aa14.84□□□□□ -0.03
VPS33A-206ENST00000542310 SCN2AQ99250 2005 aa14.83□□□□□ -0.03
VPS33A-206ENST00000542310 A0A0A6YYC8 382 aaPredicted RBP14.83□□□□□ -0.04
VPS33A-206ENST00000542310 ANKUB1A6NFN9 424 aa14.83□□□□□ -0.04
VPS33A-206ENST00000542310 H7BY64 318 aa14.83□□□□□ -0.04
VPS33A-206ENST00000542310 I3L1I5 382 aaPredicted RBP14.83□□□□□ -0.04
VPS33A-206ENST00000542310 SERPINA7P05543 415 aa14.83□□□□□ -0.04
VPS33A-206ENST00000542310 HEXBP07686 556 aa14.83□□□□□ -0.04
VPS33A-206ENST00000542310 PRR35P0CG20 571 aa14.83□□□□□ -0.04
VPS33A-206ENST00000542310 AVPR1BP47901 424 aa14.83□□□□□ -0.04
VPS33A-206ENST00000542310 GLRBP48167 497 aa14.83□□□□□ -0.04
VPS33A-206ENST00000542310 ELOAQ14241 798 aaKnown RBP14.83□□□□□ -0.04
VPS33A-206ENST00000542310 INAQ16352 499 aa14.83□□□□□ -0.04
VPS33A-206ENST00000542310 EIF2S3LQ2VIR3 472 aaKnown RBP14.83□□□□□ -0.04
VPS33A-206ENST00000542310 RPUSD3Q6P087 351 aaKnown RBP14.83□□□□□ -0.04
VPS33A-206ENST00000542310 TMEM205Q6UW68 189 aa14.83□□□□□ -0.04
VPS33A-206ENST00000542310 LCTLQ6UWM7 567 aa14.83□□□□□ -0.04
VPS33A-206ENST00000542310 VN1R4Q7Z5H5 301 aa14.83□□□□□ -0.04
VPS33A-206ENST00000542310 LAPTM4BQ86VI4 370 aa14.83□□□□□ -0.04
VPS33A-206ENST00000542310 DNAJB14Q8TBM8 379 aa14.83□□□□□ -0.04
VPS33A-206ENST00000542310 C8orf44Q96CB5 159 aa14.83□□□□□ -0.04
VPS33A-206ENST00000542310 LRRC39Q96DD0 335 aa14.83□□□□□ -0.04
VPS33A-206ENST00000542310 PRAP1Q96NZ9 151 aa14.83□□□□□ -0.04
VPS33A-206ENST00000542310 NDNQ99608 321 aa14.83□□□□□ -0.04
VPS33A-206ENST00000542310 SGPP1Q9BX95 441 aa14.83□□□□□ -0.04
VPS33A-206ENST00000542310 ZNF700Q9H0M5 742 aa14.83□□□□□ -0.04
VPS33A-206ENST00000542310 PLEKHB1Q9UF11 243 aaPredicted RBP14.83□□□□□ -0.04
VPS33A-206ENST00000542310 NTNG1Q9Y2I2 539 aa14.83□□□□□ -0.04
VPS33A-206ENST00000542310 MRPS2Q9Y399 296 aaKnown RBP14.83□□□□□ -0.04
VPS33A-206ENST00000542310 BMP10O95393 424 aa14.82□□□□□ -0.04
VPS33A-206ENST00000542310 IVDP26440 423 aa14.82□□□□□ -0.04
VPS33A-206ENST00000542310 GABRB3P28472 473 aa14.82□□□□□ -0.04
VPS33A-206ENST00000542310 AP1S2P56377 157 aa14.82□□□□□ -0.04
VPS33A-206ENST00000542310 CSNK1G2P78368 415 aa14.82□□□□□ -0.04
VPS33A-206ENST00000542310 EEF1A2Q05639 463 aaKnown RBP14.82□□□□□ -0.04
VPS33A-206ENST00000542310 FRG1Q14331 258 aaKnown RBP14.82□□□□□ -0.04
VPS33A-206ENST00000542310 RBM20Q5T481 1227 aaKnown RBP14.82□□□□□ -0.04
VPS33A-206ENST00000542310 TMEM214Q6NUQ4 689 aaKnown RBP14.82□□□□□ -0.04
VPS33A-206ENST00000542310 AGTRAPQ6RW13 159 aa14.82□□□□□ -0.04
VPS33A-206ENST00000542310 PAQR3Q6TCH7 311 aa14.82□□□□□ -0.04
VPS33A-206ENST00000542310 C17orf64Q86WR6 236 aa14.82□□□□□ -0.04
VPS33A-206ENST00000542310 PLD3Q8IV08 490 aa14.82□□□□□ -0.04
VPS33A-206ENST00000542310 PDIK1LQ8N165 341 aa14.82□□□□□ -0.04
VPS33A-206ENST00000542310 CAMKVQ8NCB2 501 aa14.82□□□□□ -0.04
VPS33A-206ENST00000542310 PRR7Q8TB68 274 aa14.82□□□□□ -0.04
VPS33A-206ENST00000542310 EEF1AKMT1Q8WVE0 214 aa14.82□□□□□ -0.04
VPS33A-206ENST00000542310 LINGO1Q96FE5 620 aa14.82□□□□□ -0.04
VPS33A-206ENST00000542310 MESP1Q9BRJ9 268 aa14.82□□□□□ -0.04
VPS33A-206ENST00000542310 HAUS8Q9BT25 410 aa14.82□□□□□ -0.04
VPS33A-206ENST00000542310 SARGQ9BW04 601 aa14.82□□□□□ -0.04
VPS33A-206ENST00000542310 YIPF2Q9BWQ6 316 aa14.82□□□□□ -0.04
VPS33A-206ENST00000542310 GRPEL1Q9HAV7 217 aa14.82□□□□□ -0.04
VPS33A-206ENST00000542310 ABCF3Q9NUQ8 709 aa14.82□□□□□ -0.04
VPS33A-206ENST00000542310 ADAMTS6Q9UKP5 1117 aa14.82□□□□□ -0.04
VPS33A-206ENST00000542310 SLC5A6Q9Y289 635 aa14.82□□□□□ -0.04
VPS33A-206ENST00000542310 ZGRF1Q86YA3 2104 aa14.81□□□□□ -0.04
VPS33A-206ENST00000542310 DYTNA2CJ06 578 aa14.81□□□□□ -0.04
VPS33A-206ENST00000542310 PABPN1LA6NDY0 278 aaKnown RBP14.81□□□□□ -0.04
VPS33A-206ENST00000542310 WIPF3A6NGB9 483 aa14.81□□□□□ -0.04
VPS33A-206ENST00000542310 E2F3O00716 465 aa14.81□□□□□ -0.04
VPS33A-206ENST00000542310 TSPAN12O95859 305 aa14.81□□□□□ -0.04
VPS33A-206ENST00000542310 LDLRP01130 860 aa14.81□□□□□ -0.04
VPS33A-206ENST00000542310 AHSGP02765 367 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms