RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 SPASTQ9UBP0 616 aa3.27□□□□□ -1.89
LEMD3-204ENST00000542032 DNAJB4Q9UDY4 337 aa3.27□□□□□ -1.89
LEMD3-204ENST00000542032 SUN2Q9UH99 717 aa3.27□□□□□ -1.89
LEMD3-204ENST00000542032 FAM153AQ9UHL3 310 aa3.27□□□□□ -1.89
LEMD3-204ENST00000542032 LEF1Q9UJU2 399 aaPredicted RBP3.27□□□□□ -1.89
LEMD3-204ENST00000542032 TEX264Q9Y6I9 313 aa3.27□□□□□ -1.89
LEMD3-204ENST00000542032 ZNF644Q9H582 1327 aaPredicted RBP3.26□□□□□ -1.89
LEMD3-204ENST00000542032 A0A1B0GU03 582 aa3.26□□□□□ -1.89
LEMD3-204ENST00000542032 FEZF1A0PJY2 475 aa3.26□□□□□ -1.89
LEMD3-204ENST00000542032 KPNA7A9QM74 516 aa3.26□□□□□ -1.89
LEMD3-204ENST00000542032 H0YIN7 160 aa3.26□□□□□ -1.89
LEMD3-204ENST00000542032 TRIM77I1YAP6 450 aa3.26□□□□□ -1.89
LEMD3-204ENST00000542032 M0QX08 132 aa3.26□□□□□ -1.89
LEMD3-204ENST00000542032 O00370 1275 aa3.26□□□□□ -1.89
LEMD3-204ENST00000542032 MAP2K7O14733 419 aa3.26□□□□□ -1.89
LEMD3-204ENST00000542032 MAGEB3O15480 346 aa3.26□□□□□ -1.89
LEMD3-204ENST00000542032 GMFGO60234 142 aa3.26□□□□□ -1.89
LEMD3-204ENST00000542032 NEMFO60524 1076 aa3.26□□□□□ -1.89
LEMD3-204ENST00000542032 GPC4O75487 556 aa3.26□□□□□ -1.89
LEMD3-204ENST00000542032 KCNK5O95279 499 aa3.26□□□□□ -1.89
LEMD3-204ENST00000542032 DIRAS3O95661 229 aa3.26□□□□□ -1.89
LEMD3-204ENST00000542032 TFAP2AP05549 437 aa3.26□□□□□ -1.89
LEMD3-204ENST00000542032 CCDC192P0DO97 292 aa3.26□□□□□ -1.89
LEMD3-204ENST00000542032 ETS1P14921 441 aa3.26□□□□□ -1.89
LEMD3-204ENST00000542032 EPORP19235 508 aa3.26□□□□□ -1.89
LEMD3-204ENST00000542032 PITPNBP48739 271 aa3.26□□□□□ -1.89
LEMD3-204ENST00000542032 GPR143P51810 404 aa3.26□□□□□ -1.89
LEMD3-204ENST00000542032 CTSCP53634 463 aa3.26□□□□□ -1.89
LEMD3-204ENST00000542032 PPP2R2BQ00005 443 aa3.26□□□□□ -1.89
LEMD3-204ENST00000542032 MBTD1Q05BQ5 628 aa3.26□□□□□ -1.89
LEMD3-204ENST00000542032 GFPT1Q06210 699 aaPredicted RBP3.26□□□□□ -1.89
LEMD3-204ENST00000542032 SGCBQ16585 318 aa3.26□□□□□ -1.89
LEMD3-204ENST00000542032 TEX35Q5T0J7 233 aa3.26□□□□□ -1.89
LEMD3-204ENST00000542032 TPGS2Q68CL5 300 aa3.26□□□□□ -1.89
LEMD3-204ENST00000542032 MFSD7Q6UXD7 560 aa3.26□□□□□ -1.89
LEMD3-204ENST00000542032 ZYG11AQ6WRX3 759 aa3.26□□□□□ -1.89
LEMD3-204ENST00000542032 RBM43Q6ZSC3 357 aaKnown RBP3.26□□□□□ -1.89
LEMD3-204ENST00000542032 HACE1Q8IYU2 909 aa3.26□□□□□ -1.89
LEMD3-204ENST00000542032 RASGEF1CQ8N431 466 aa3.26□□□□□ -1.89
LEMD3-204ENST00000542032 FBXO39Q8N4B4 442 aa3.26□□□□□ -1.89
LEMD3-204ENST00000542032 EMC1Q8N766 993 aa3.26□□□□□ -1.89
LEMD3-204ENST00000542032 BANPQ8N9N5 519 aa3.26□□□□□ -1.89
LEMD3-204ENST00000542032 ADAD2Q8NCV1 583 aaKnown RBP3.26□□□□□ -1.89
LEMD3-204ENST00000542032 OR6C4Q8NGE1 309 aa3.26□□□□□ -1.89
LEMD3-204ENST00000542032 THRSPQ92748 146 aa3.26□□□□□ -1.89
LEMD3-204ENST00000542032 BCL2L2Q92843 193 aaPredicted RBP3.26□□□□□ -1.89
LEMD3-204ENST00000542032 EXT2Q93063 718 aa3.26□□□□□ -1.89
LEMD3-204ENST00000542032 ST6GALNAC6Q969X2 333 aa3.26□□□□□ -1.89
LEMD3-204ENST00000542032 DTNBP1Q96EV8 351 aa3.26□□□□□ -1.89
LEMD3-204ENST00000542032 ERP44Q9BS26 406 aa3.26□□□□□ -1.89
LEMD3-204ENST00000542032 THUMPD2Q9BTF0 503 aaKnown RBP3.26□□□□□ -1.89
LEMD3-204ENST00000542032 RTN4RQ9BZR6 473 aa3.26□□□□□ -1.89
LEMD3-204ENST00000542032 SPATC1LQ9H0A9 340 aa3.26□□□□□ -1.89
LEMD3-204ENST00000542032 P2RY12Q9H244 342 aa3.26□□□□□ -1.89
LEMD3-204ENST00000542032 KCNK15Q9H427 330 aa3.26□□□□□ -1.89
LEMD3-204ENST00000542032 SYTL2Q9HCH5 934 aa3.26□□□□□ -1.89
LEMD3-204ENST00000542032 EPB41L5Q9HCM4 733 aa3.26□□□□□ -1.89
LEMD3-204ENST00000542032 SLC52A3Q9NQ40 469 aa3.26□□□□□ -1.89
LEMD3-204ENST00000542032 SOHLH2Q9NX45 425 aa3.26□□□□□ -1.89
LEMD3-204ENST00000542032 UTP6Q9NYH9 597 aaKnown RBP3.26□□□□□ -1.89
LEMD3-204ENST00000542032 ITM2BQ9Y287 266 aa3.26□□□□□ -1.89
LEMD3-204ENST00000542032 ASB3Q9Y575 518 aa3.26□□□□□ -1.89
LEMD3-204ENST00000542032 NSD2O96028 1365 aa3.25□□□□□ -1.89
LEMD3-204ENST00000542032 FAM205AQ6ZU69 1335 aa3.25□□□□□ -1.89
LEMD3-204ENST00000542032 TTC21BQ7Z4L5 1316 aa3.25□□□□□ -1.89
LEMD3-204ENST00000542032 A0A087X002 238 aa3.25□□□□□ -1.89
LEMD3-204ENST00000542032 C5orf51A6NDU8 294 aa3.25□□□□□ -1.89
LEMD3-204ENST00000542032 OOEPA6NGQ2 149 aa3.25□□□□□ -1.89
LEMD3-204ENST00000542032 C5orf52A6NGY3 159 aa3.25□□□□□ -1.89
LEMD3-204ENST00000542032 NR5A2O00482 541 aa3.25□□□□□ -1.89
LEMD3-204ENST00000542032 RASGRF2O14827 1237 aa3.25□□□□□ -1.89
LEMD3-204ENST00000542032 SLC30A4O14863 429 aa3.25□□□□□ -1.89
LEMD3-204ENST00000542032 IFIT3O14879 490 aaKnown RBP3.25□□□□□ -1.89
LEMD3-204ENST00000542032 SELENOFO60613 162 aa3.25□□□□□ -1.89
LEMD3-204ENST00000542032 PRAMEF12O95522 483 aa3.25□□□□□ -1.89
LEMD3-204ENST00000542032 PTBP3O95758 552 aaKnown RBP3.25□□□□□ -1.89
LEMD3-204ENST00000542032 PDGFBP01127 241 aaPredicted RBP3.25□□□□□ -1.89
LEMD3-204ENST00000542032 TGFAP01135 160 aa3.25□□□□□ -1.89
LEMD3-204ENST00000542032 CD48P09326 243 aa3.25□□□□□ -1.89
LEMD3-204ENST00000542032 IGHV4-38-2P0DP08 117 aa3.25□□□□□ -1.89
LEMD3-204ENST00000542032 PFKFB1P16118 471 aa3.25□□□□□ -1.89
LEMD3-204ENST00000542032 LBPP18428 481 aa3.25□□□□□ -1.89
LEMD3-204ENST00000542032 AHCYP23526 432 aa3.25□□□□□ -1.89
LEMD3-204ENST00000542032 CHRNB4P30926 498 aa3.25□□□□□ -1.89
LEMD3-204ENST00000542032 CHRNA3P32297 505 aa3.25□□□□□ -1.89
LEMD3-204ENST00000542032 CTNNB1P35222 781 aa3.25□□□□□ -1.89
LEMD3-204ENST00000542032 SOAT1P35610 550 aa3.25□□□□□ -1.89
LEMD3-204ENST00000542032 NAGLUP54802 743 aa3.25□□□□□ -1.89
LEMD3-204ENST00000542032 ST8SIA6P61647 398 aa3.25□□□□□ -1.89
LEMD3-204ENST00000542032 GABPB1Q06547 395 aaPredicted RBP3.25□□□□□ -1.89
LEMD3-204ENST00000542032 CHIT1Q13231 466 aa3.25□□□□□ -1.89
LEMD3-204ENST00000542032 MVPQ14764 893 aaKnown RBP3.25□□□□□ -1.89
LEMD3-204ENST00000542032 LBHQ53QV2 105 aaPredicted RBP3.25□□□□□ -1.89
LEMD3-204ENST00000542032 RIPPLY2Q5TAB7 128 aa3.25□□□□□ -1.89
LEMD3-204ENST00000542032 CYP4A22Q5TCH4 519 aa3.25□□□□□ -1.89
LEMD3-204ENST00000542032 KRT39Q6A163 491 aa3.25□□□□□ -1.89
LEMD3-204ENST00000542032 PACS1Q6VY07 963 aa3.25□□□□□ -1.89
LEMD3-204ENST00000542032 TMEM182Q6ZP80 229 aaPredicted RBP3.25□□□□□ -1.89
LEMD3-204ENST00000542032 C1orf186Q6ZWK4 172 aa3.25□□□□□ -1.89
LEMD3-204ENST00000542032 INTS8Q75QN2 995 aaKnown RBP3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms