RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 DCAKDQ8WVC6 231 aa9.28□□□□□ -0.92
YBX3-212ENST00000542002 SLC44A1Q8WWI5 657 aa9.28□□□□□ -0.92
YBX3-212ENST00000542002 NEIL2Q969S2 332 aa9.28□□□□□ -0.92
YBX3-212ENST00000542002 KIAA1191Q96A73 305 aa9.28□□□□□ -0.92
YBX3-212ENST00000542002 MOCOSQ96EN8 888 aa9.28□□□□□ -0.92
YBX3-212ENST00000542002 TSPAN17Q96FV3 270 aa9.28□□□□□ -0.92
YBX3-212ENST00000542002 WBP1Q96G27 269 aa9.28□□□□□ -0.92
YBX3-212ENST00000542002 TSNARE1Q96NA8 513 aa9.28□□□□□ -0.92
YBX3-212ENST00000542002 DPH2Q9BQC3 489 aaPredicted RBP9.28□□□□□ -0.92
YBX3-212ENST00000542002 MESP1Q9BRJ9 268 aa9.28□□□□□ -0.92
YBX3-212ENST00000542002 TRIM54Q9BYV2 358 aa9.28□□□□□ -0.92
YBX3-212ENST00000542002 PCBD2Q9H0N5 130 aa9.28□□□□□ -0.92
YBX3-212ENST00000542002 TSPYL1Q9H0U9 437 aa9.28□□□□□ -0.92
YBX3-212ENST00000542002 IFT80Q9P2H3 777 aaPredicted RBP9.28□□□□□ -0.92
YBX3-212ENST00000542002 NDOR1Q9UHB4 597 aa9.28□□□□□ -0.92
YBX3-212ENST00000542002 SRPK3Q9UPE1 567 aa9.28□□□□□ -0.92
YBX3-212ENST00000542002 KCNMB2Q9Y691 235 aa9.28□□□□□ -0.92
YBX3-212ENST00000542002 SPENQ96T58 3664 aaKnown RBP9.28□□□□□ -0.92
YBX3-212ENST00000542002 SNRNP200O75643 2136 aaKnown RBP9.28□□□□□ -0.92
YBX3-212ENST00000542002 PCSK5Q92824 1860 aa9.28□□□□□ -0.92
YBX3-212ENST00000542002 BOD1L1Q8NFC6 3051 aa9.27□□□□□ -0.93
YBX3-212ENST00000542002 POC1B-GALNT4F8VUJ3 575 aa9.27□□□□□ -0.93
YBX3-212ENST00000542002 K7EM74 188 aa9.27□□□□□ -0.93
YBX3-212ENST00000542002 MASP2O00187 686 aa9.27□□□□□ -0.93
YBX3-212ENST00000542002 FFAR3O14843 346 aa9.27□□□□□ -0.93
YBX3-212ENST00000542002 GPR42O15529 346 aa9.27□□□□□ -0.93
YBX3-212ENST00000542002 ZNF500O60304 480 aaPredicted RBP9.27□□□□□ -0.93
YBX3-212ENST00000542002 DNAJB6O75190 326 aa9.27□□□□□ -0.93
YBX3-212ENST00000542002 ANXA5P08758 320 aa9.27□□□□□ -0.93
YBX3-212ENST00000542002 MTHFD2P13995 350 aa9.27□□□□□ -0.93
YBX3-212ENST00000542002 CCND1P24385 295 aa9.27□□□□□ -0.93
YBX3-212ENST00000542002 HRH2P25021 359 aa9.27□□□□□ -0.93
YBX3-212ENST00000542002 VARSP26640 1264 aaKnown RBP9.27□□□□□ -0.93
YBX3-212ENST00000542002 CRABP2P29373 138 aa9.27□□□□□ -0.93
YBX3-212ENST00000542002 PHBP35232 272 aa9.27□□□□□ -0.93
YBX3-212ENST00000542002 GGT5P36269 586 aa9.27□□□□□ -0.93
YBX3-212ENST00000542002 POLE2P56282 527 aa9.27□□□□□ -0.93
YBX3-212ENST00000542002 ATP6V0D1P61421 351 aa9.27□□□□□ -0.93
YBX3-212ENST00000542002 MC1RQ01726 317 aa9.27□□□□□ -0.93
YBX3-212ENST00000542002 ILF2Q12905 390 aaKnown RBP9.27□□□□□ -0.93
YBX3-212ENST00000542002 NKG7Q16617 165 aa9.27□□□□□ -0.93
YBX3-212ENST00000542002 FAM214AQ32MH5 1076 aa9.27□□□□□ -0.93
YBX3-212ENST00000542002 YOD1Q5VVQ6 348 aaPredicted RBP9.27□□□□□ -0.93
YBX3-212ENST00000542002 SHISA6Q6ZSJ9 500 aa9.27□□□□□ -0.93
YBX3-212ENST00000542002 RAPH1Q70E73 1250 aa9.27□□□□□ -0.93
YBX3-212ENST00000542002 OVCH1Q7RTY7 1134 aa9.27□□□□□ -0.93
YBX3-212ENST00000542002 PRSS41Q7RTY9 318 aa9.27□□□□□ -0.93
YBX3-212ENST00000542002 ADAMTSL2Q86TH1 951 aa9.27□□□□□ -0.93
YBX3-212ENST00000542002 SYVN1Q86TM6 617 aa9.27□□□□□ -0.93
YBX3-212ENST00000542002 LAPTM4BQ86VI4 370 aa9.27□□□□□ -0.93
YBX3-212ENST00000542002 GPSM1Q86YR5 675 aa9.27□□□□□ -0.93
YBX3-212ENST00000542002 KLHDC8AQ8IYD2 350 aa9.27□□□□□ -0.93
YBX3-212ENST00000542002 PLD6Q8N2A8 252 aaKnown RBP9.27□□□□□ -0.93
YBX3-212ENST00000542002 KCT2Q8NC54 265 aa9.27□□□□□ -0.93
YBX3-212ENST00000542002 LSM14AQ8ND56 463 aaKnown RBP9.27□□□□□ -0.93
YBX3-212ENST00000542002 KCTD4Q8WVF5 259 aa9.27□□□□□ -0.93
YBX3-212ENST00000542002 ATL1Q8WXF7 558 aa9.27□□□□□ -0.93
YBX3-212ENST00000542002 ATOH8Q96SQ7 321 aa9.27□□□□□ -0.93
YBX3-212ENST00000542002 EGFL8Q99944 293 aa9.27□□□□□ -0.93
YBX3-212ENST00000542002 TMEM79Q9BSE2 394 aa9.27□□□□□ -0.93
YBX3-212ENST00000542002 HAUS8Q9BT25 410 aa9.27□□□□□ -0.93
YBX3-212ENST00000542002 DHRS4Q9BTZ2 278 aa9.27□□□□□ -0.93
YBX3-212ENST00000542002 TRIM55Q9BYV6 548 aa9.27□□□□□ -0.93
YBX3-212ENST00000542002 ALG9Q9H6U8 611 aa9.27□□□□□ -0.93
YBX3-212ENST00000542002 ANKZF1Q9H8Y5 726 aa9.27□□□□□ -0.93
YBX3-212ENST00000542002 SNX15Q9NRS6 342 aa9.27□□□□□ -0.93
YBX3-212ENST00000542002 TXLNGQ9NUQ3 528 aa9.27□□□□□ -0.93
YBX3-212ENST00000542002 ZNF358Q9NW07 568 aa9.27□□□□□ -0.93
YBX3-212ENST00000542002 CTSFQ9UBX1 484 aa9.27□□□□□ -0.93
YBX3-212ENST00000542002 PTBP2Q9UKA9 531 aaKnown RBP9.27□□□□□ -0.93
YBX3-212ENST00000542002 KALRNO60229 2985 aa9.27□□□□□ -0.93
YBX3-212ENST00000542002 A0A096LPK6 155 aa9.26□□□□□ -0.93
YBX3-212ENST00000542002 VSTM2BA6NLU5 285 aa9.26□□□□□ -0.93
YBX3-212ENST00000542002 TK2O00142 265 aa9.26□□□□□ -0.93
YBX3-212ENST00000542002 RIPK2O43353 540 aa9.26□□□□□ -0.93
YBX3-212ENST00000542002 DNAJB5O75953 348 aa9.26□□□□□ -0.93
YBX3-212ENST00000542002 LTA4HP09960 611 aaKnown RBP9.26□□□□□ -0.93
YBX3-212ENST00000542002 EPORP19235 508 aa9.26□□□□□ -0.93
YBX3-212ENST00000542002 TFEBP19484 476 aa9.26□□□□□ -0.93
YBX3-212ENST00000542002 SLC26A3P40879 764 aa9.26□□□□□ -0.93
YBX3-212ENST00000542002 MAGEA12P43365 314 aa9.26□□□□□ -0.93
YBX3-212ENST00000542002 GLRBP48167 497 aa9.26□□□□□ -0.93
YBX3-212ENST00000542002 HSPA7P48741 367 aa9.26□□□□□ -0.93
YBX3-212ENST00000542002 AGTR2P50052 363 aa9.26□□□□□ -0.93
YBX3-212ENST00000542002 HNMTP50135 292 aa9.26□□□□□ -0.93
YBX3-212ENST00000542002 CCR8P51685 355 aa9.26□□□□□ -0.93
YBX3-212ENST00000542002 EFNA3P52797 238 aa9.26□□□□□ -0.93
YBX3-212ENST00000542002 PMS2P54278 862 aa9.26□□□□□ -0.93
YBX3-212ENST00000542002 EMP3P54852 163 aa9.26□□□□□ -0.93
YBX3-212ENST00000542002 CHAF1BQ13112 559 aa9.26□□□□□ -0.93
YBX3-212ENST00000542002 SLC29A2Q14542 456 aa9.26□□□□□ -0.93
YBX3-212ENST00000542002 NAA25Q14CX7 972 aa9.26□□□□□ -0.93
YBX3-212ENST00000542002 SYT16Q17RD7 645 aa9.26□□□□□ -0.93
YBX3-212ENST00000542002 CPZQ66K79 652 aa9.26□□□□□ -0.93
YBX3-212ENST00000542002 NXPE4Q6UWF7 544 aa9.26□□□□□ -0.93
YBX3-212ENST00000542002 SLCO4C1Q6ZQN7 724 aa9.26□□□□□ -0.93
YBX3-212ENST00000542002 CEP128Q6ZU80 1094 aa9.26□□□□□ -0.93
YBX3-212ENST00000542002 TRMT10CQ7L0Y3 403 aaKnown RBP9.26□□□□□ -0.93
YBX3-212ENST00000542002 PDSS2Q86YH6 399 aa9.26□□□□□ -0.93
YBX3-212ENST00000542002 ZNF843Q8N446 348 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms