RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 PCDHGB5Q9Y5G0 923 aa14.56□□□□□ -0.08
SMARCA4-207ENST00000541122 ATRNL1Q5VV63 1379 aa14.56□□□□□ -0.08
SMARCA4-207ENST00000541122 OR51F1A6NGY5 319 aa14.56□□□□□ -0.08
SMARCA4-207ENST00000541122 MANSC4A6NHS7 340 aaPredicted RBP14.56□□□□□ -0.08
SMARCA4-207ENST00000541122 A8MV72 311 aaPredicted RBP14.56□□□□□ -0.08
SMARCA4-207ENST00000541122 PRMT3O60678 531 aa14.56□□□□□ -0.08
SMARCA4-207ENST00000541122 CDK4P11802 303 aa14.56□□□□□ -0.08
SMARCA4-207ENST00000541122 EFNA1P20827 205 aaPredicted RBP14.56□□□□□ -0.08
SMARCA4-207ENST00000541122 GRK6P43250 576 aa14.56□□□□□ -0.08
SMARCA4-207ENST00000541122 MAGEA12P43365 314 aa14.56□□□□□ -0.08
SMARCA4-207ENST00000541122 MAP2K4P45985 399 aa14.56□□□□□ -0.08
SMARCA4-207ENST00000541122 C1orf189Q5VU69 101 aa14.56□□□□□ -0.08
SMARCA4-207ENST00000541122 CYP2S1Q96SQ9 504 aa14.56□□□□□ -0.08
SMARCA4-207ENST00000541122 MTERF1Q99551 399 aaKnown RBP14.56□□□□□ -0.08
SMARCA4-207ENST00000541122 PIGVQ9NUD9 493 aa14.56□□□□□ -0.08
SMARCA4-207ENST00000541122 MS4A12Q9NXJ0 267 aa14.56□□□□□ -0.08
SMARCA4-207ENST00000541122 ATPIF1Q9UII2 106 aa14.56□□□□□ -0.08
SMARCA4-207ENST00000541122 RBM7Q9Y580 266 aaKnown RBP14.56□□□□□ -0.08
SMARCA4-207ENST00000541122 TPST2O60704 377 aa14.56□□□□□ -0.08
SMARCA4-207ENST00000541122 MMP3P08254 477 aa14.56□□□□□ -0.08
SMARCA4-207ENST00000541122 CMPK1P30085 196 aa14.56□□□□□ -0.08
SMARCA4-207ENST00000541122 EPHX2P34913 555 aa14.56□□□□□ -0.08
SMARCA4-207ENST00000541122 STC1P52823 247 aa14.56□□□□□ -0.08
SMARCA4-207ENST00000541122 XKR4Q5GH76 650 aa14.56□□□□□ -0.08
SMARCA4-207ENST00000541122 LRRC66Q68CR7 880 aa14.56□□□□□ -0.08
SMARCA4-207ENST00000541122 ZNF598Q86UK7 904 aaKnown RBP14.56□□□□□ -0.08
SMARCA4-207ENST00000541122 RHEBL1Q8TAI7 183 aa14.56□□□□□ -0.08
SMARCA4-207ENST00000541122 SLC35F5Q8WV83 523 aa14.56□□□□□ -0.08
SMARCA4-207ENST00000541122 ZNF486Q96H40 463 aaPredicted RBP14.56□□□□□ -0.08
SMARCA4-207ENST00000541122 TTPALQ9BTX7 342 aa14.56□□□□□ -0.08
SMARCA4-207ENST00000541122 FBRSL1Q9HCM7 1045 aaKnown RBP14.56□□□□□ -0.08
SMARCA4-207ENST00000541122 NR2E3Q9Y5X4 410 aa14.56□□□□□ -0.08
SMARCA4-207ENST00000541122 SETD1AO15047 1707 aaKnown RBP14.55□□□□□ -0.08
SMARCA4-207ENST00000541122 PRSS51A0A1B0GVH4 220 aa14.55□□□□□ -0.08
SMARCA4-207ENST00000541122 CACNB4O00305 520 aaPredicted RBP14.55□□□□□ -0.08
SMARCA4-207ENST00000541122 WNT9AO14904 365 aa14.55□□□□□ -0.08
SMARCA4-207ENST00000541122 SCGNO76038 276 aa14.55□□□□□ -0.08
SMARCA4-207ENST00000541122 LMO2P25791 158 aa14.55□□□□□ -0.08
SMARCA4-207ENST00000541122 HTR2BP41595 481 aa14.55□□□□□ -0.08
SMARCA4-207ENST00000541122 KCNC4Q03721 635 aa14.55□□□□□ -0.08
SMARCA4-207ENST00000541122 TECRLQ5HYJ1 363 aa14.55□□□□□ -0.08
SMARCA4-207ENST00000541122 C10orf62Q5T681 223 aaPredicted RBP14.55□□□□□ -0.08
SMARCA4-207ENST00000541122 CLEC20AQ6ZU45 233 aa14.55□□□□□ -0.08
SMARCA4-207ENST00000541122 TTLQ8NG68 377 aa14.55□□□□□ -0.08
SMARCA4-207ENST00000541122 NRG4Q8WWG1 115 aa14.55□□□□□ -0.08
SMARCA4-207ENST00000541122 TCEAL4Q96EI5 215 aa14.55□□□□□ -0.08
SMARCA4-207ENST00000541122 KXD1Q9BQD3 176 aa14.55□□□□□ -0.08
SMARCA4-207ENST00000541122 ITM2CQ9NQX7 267 aa14.55□□□□□ -0.08
SMARCA4-207ENST00000541122 PHPT1Q9NRX4 125 aaPredicted RBP14.55□□□□□ -0.08
SMARCA4-207ENST00000541122 SRRDQ9UH36 339 aa14.55□□□□□ -0.08
SMARCA4-207ENST00000541122 SYN3O14994 580 aa14.55□□□□□ -0.08
SMARCA4-207ENST00000541122 FGF19O95750 216 aa14.55□□□□□ -0.08
SMARCA4-207ENST00000541122 NPR2P20594 1047 aa14.55□□□□□ -0.08
SMARCA4-207ENST00000541122 KELP23276 732 aa14.55□□□□□ -0.08
SMARCA4-207ENST00000541122 SEC23BQ15437 767 aa14.55□□□□□ -0.08
SMARCA4-207ENST00000541122 ANKRD26P1Q6NSI1 321 aa14.55□□□□□ -0.08
SMARCA4-207ENST00000541122 NPAS3Q8IXF0 933 aa14.55□□□□□ -0.08
SMARCA4-207ENST00000541122 NAT16Q8N8M0 369 aa14.55□□□□□ -0.08
SMARCA4-207ENST00000541122 PPP1R13LQ8WUF5 828 aa14.55□□□□□ -0.08
SMARCA4-207ENST00000541122 HEPHQ9BQS7 1158 aa14.55□□□□□ -0.08
SMARCA4-207ENST00000541122 GPR88Q9GZN0 384 aa14.55□□□□□ -0.08
SMARCA4-207ENST00000541122 AIG1Q9NVV5 245 aa14.55□□□□□ -0.08
SMARCA4-207ENST00000541122 LYARQ9NX58 379 aaKnown RBP14.55□□□□□ -0.08
SMARCA4-207ENST00000541122 TLX2O43763 284 aaPredicted RBP14.55□□□□□ -0.08
SMARCA4-207ENST00000541122 TRIM3O75382 744 aaPredicted RBP14.55□□□□□ -0.08
SMARCA4-207ENST00000541122 CTSEP14091 401 aa14.55□□□□□ -0.08
SMARCA4-207ENST00000541122 AMD1P17707 334 aa14.55□□□□□ -0.08
SMARCA4-207ENST00000541122 C6orf136Q5SQH8 315 aa14.55□□□□□ -0.08
SMARCA4-207ENST00000541122 DCDC5Q6ZRR9 648 aa14.55□□□□□ -0.08
SMARCA4-207ENST00000541122 NUDT13Q86X67 352 aa14.55□□□□□ -0.08
SMARCA4-207ENST00000541122 ZSWIM9Q86XI8 627 aa14.55□□□□□ -0.08
SMARCA4-207ENST00000541122 ATAD1Q8NBU5 361 aa14.55□□□□□ -0.08
SMARCA4-207ENST00000541122 PRR11Q96HE9 360 aaPredicted RBP14.55□□□□□ -0.08
SMARCA4-207ENST00000541122 AHCYL2Q96HN2 611 aaKnown RBP14.55□□□□□ -0.08
SMARCA4-207ENST00000541122 MKKSQ9NPJ1 570 aaPredicted RBP14.55□□□□□ -0.08
SMARCA4-207ENST00000541122 IMP3Q9NV31 184 aaKnown RBP14.55□□□□□ -0.08
SMARCA4-207ENST00000541122 ZDHHC3Q9NYG2 299 aa14.55□□□□□ -0.08
SMARCA4-207ENST00000541122 SLC2A6Q9UGQ3 507 aa14.55□□□□□ -0.08
SMARCA4-207ENST00000541122 NT5EP21589 574 aa14.55□□□□□ -0.08
SMARCA4-207ENST00000541122 ITPKBP27987 946 aa14.55□□□□□ -0.08
SMARCA4-207ENST00000541122 SF1Q15637 639 aaKnown RBP14.55□□□□□ -0.08
SMARCA4-207ENST00000541122 ZMIZ2Q8NF64 920 aa14.55□□□□□ -0.08
SMARCA4-207ENST00000541122 PEX13Q92968 403 aa14.55□□□□□ -0.08
SMARCA4-207ENST00000541122 FUBP3Q96I24 572 aaKnown RBP eCLIP14.55□□□□□ -0.08
SMARCA4-207ENST00000541122 MAELQ96JY0 434 aaKnown RBP14.55□□□□□ -0.08
SMARCA4-207ENST00000541122 TTYH2Q9BSA4 534 aa14.55□□□□□ -0.08
SMARCA4-207ENST00000541122 CCSER2Q9H7U1 834 aa14.55□□□□□ -0.08
SMARCA4-207ENST00000541122 TAS2R10Q9NYW0 307 aa14.55□□□□□ -0.08
SMARCA4-207ENST00000541122 GTF2IRD1Q9UHL9 959 aa14.55□□□□□ -0.08
SMARCA4-207ENST00000541122 PCDHAC2Q9Y5I4 1007 aa14.55□□□□□ -0.08
SMARCA4-207ENST00000541122 CHD2O14647 1828 aaKnown RBP14.55□□□□□ -0.08
SMARCA4-207ENST00000541122 MYBPHLA2RUH7 354 aa14.54□□□□□ -0.08
SMARCA4-207ENST00000541122 KRBA1A5PL33 1030 aa14.54□□□□□ -0.08
SMARCA4-207ENST00000541122 CDC7O00311 574 aa14.54□□□□□ -0.08
SMARCA4-207ENST00000541122 OPN1SWP03999 348 aa14.54□□□□□ -0.08
SMARCA4-207ENST00000541122 SLURP2P0DP57 97 aa14.54□□□□□ -0.08
SMARCA4-207ENST00000541122 DNASE1P24855 282 aa14.54□□□□□ -0.08
SMARCA4-207ENST00000541122 SYPL2Q5VXT5 272 aa14.54□□□□□ -0.08
SMARCA4-207ENST00000541122 PRSS48Q7RTY5 328 aa14.54□□□□□ -0.08
SMARCA4-207ENST00000541122 DEFB128Q7Z7B8 93 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms