RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, human

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
YBX3-210	ENST00000540975	UBE2C	O00762	179 aa		4.98	□□□□□ -1.61
YBX3-210	ENST00000540975	DIAPH2	O60879	1101 aa		4.98	□□□□□ -1.61
YBX3-210	ENST00000540975	ACADS	P16219	412 aa		4.98	□□□□□ -1.61
YBX3-210	ENST00000540975	MS4A2	Q01362	244 aa		4.98	□□□□□ -1.61
YBX3-210	ENST00000540975	ILF2	Q12905	390 aa	Known RBP	4.98	□□□□□ -1.61
YBX3-210	ENST00000540975	TOMM20	Q15388	145 aa		4.98	□□□□□ -1.61
YBX3-210	ENST00000540975	KYNU	Q16719	465 aa		4.98	□□□□□ -1.61
YBX3-210	ENST00000540975	GPRIN3	Q6ZVF9	776 aa		4.98	□□□□□ -1.61
YBX3-210	ENST00000540975	FCRLA	Q7L513	359 aa		4.98	□□□□□ -1.61
YBX3-210	ENST00000540975	RCOR2	Q8IZ40	523 aa		4.98	□□□□□ -1.61
YBX3-210	ENST00000540975	C9orf43	Q8TAL5	461 aa	Predicted RBP	4.98	□□□□□ -1.61
YBX3-210	ENST00000540975	C11orf45	Q8TAV5	145 aa		4.98	□□□□□ -1.61
YBX3-210	ENST00000540975	ZNF558	Q96NG5	402 aa		4.98	□□□□□ -1.61
YBX3-210	ENST00000540975	TDRD1	Q9BXT4	1180 aa	Known RBP	4.98	□□□□□ -1.61
YBX3-210	ENST00000540975	EGLN3	Q9H6Z9	239 aa		4.98	□□□□□ -1.61
YBX3-210	ENST00000540975	NDE1	Q9NXR1	346 aa		4.98	□□□□□ -1.61
YBX3-210	ENST00000540975	ELF5	Q9UKW6	265 aa	Predicted RBP	4.98	□□□□□ -1.61
YBX3-210	ENST00000540975	KRTAP9-6	A8MVA2	160 aa		4.97	□□□□□ -1.61
YBX3-210	ENST00000540975	HSD17B3	P37058	310 aa		4.97	□□□□□ -1.61
YBX3-210	ENST00000540975	CETN2	P41208	172 aa		4.97	□□□□□ -1.61
YBX3-210	ENST00000540975	DLK1	P80370	383 aa		4.97	□□□□□ -1.61
YBX3-210	ENST00000540975	TRA2A	Q13595	282 aa	Known RBP eCLIP	4.97	□□□□□ -1.61
YBX3-210	ENST00000540975	LACTB2	Q53H82	288 aa	Predicted RBP	4.97	□□□□□ -1.61
YBX3-210	ENST00000540975	TCTEX1D4	Q5JR98	221 aa		4.97	□□□□□ -1.61
YBX3-210	ENST00000540975	SPINK14	Q6IE38	97 aa		4.97	□□□□□ -1.61
YBX3-210	ENST00000540975	CHMP1B	Q7LBR1	199 aa		4.97	□□□□□ -1.61
YBX3-210	ENST00000540975	GPC2	Q8N158	579 aa		4.97	□□□□□ -1.61
YBX3-210	ENST00000540975	AQP11	Q8NBQ7	271 aa		4.97	□□□□□ -1.61
YBX3-210	ENST00000540975	KLHL5	Q96PQ7	755 aa		4.97	□□□□□ -1.61
YBX3-210	ENST00000540975	OVOL2	Q9BRP0	275 aa		4.97	□□□□□ -1.61
YBX3-210	ENST00000540975	CENPO	Q9BU64	300 aa		4.97	□□□□□ -1.61
YBX3-210	ENST00000540975	TXLNGY	Q9BZA5	131 aa		4.97	□□□□□ -1.61
YBX3-210	ENST00000540975	SDCBP2	Q9H190	292 aa		4.97	□□□□□ -1.61
YBX3-210	ENST00000540975	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	4.97	□□□□□ -1.61
YBX3-210	ENST00000540975	TTLL3	Q9Y4R7	772 aa		4.97	□□□□□ -1.61
YBX3-210	ENST00000540975	CSAG2	Q9Y5P2	127 aa		4.97	□□□□□ -1.61
YBX3-210	ENST00000540975		A0A1W2PPR1	153 aa		4.96	□□□□□ -1.62
YBX3-210	ENST00000540975	NPIPB9	F8W1W9	429 aa		4.96	□□□□□ -1.62
YBX3-210	ENST00000540975	BAG3	O95817	575 aa		4.96	□□□□□ -1.62
YBX3-210	ENST00000540975	SERPING1	P05155	500 aa		4.96	□□□□□ -1.62
YBX3-210	ENST00000540975	PAX8	Q06710	450 aa		4.96	□□□□□ -1.62
YBX3-210	ENST00000540975	PTGIS	Q16647	500 aa		4.96	□□□□□ -1.62
YBX3-210	ENST00000540975		Q8N377	158 aa		4.96	□□□□□ -1.62
YBX3-210	ENST00000540975	AMER3	Q8N944	861 aa		4.96	□□□□□ -1.62
YBX3-210	ENST00000540975	EXT2	Q93063	718 aa		4.96	□□□□□ -1.62
YBX3-210	ENST00000540975	TSACC	Q96A04	125 aa	Predicted RBP	4.96	□□□□□ -1.62
YBX3-210	ENST00000540975	CNRIP1	Q96F85	164 aa	Predicted RBP	4.96	□□□□□ -1.62
YBX3-210	ENST00000540975	PANK3	Q9H999	370 aa		4.96	□□□□□ -1.62
YBX3-210	ENST00000540975	XAB2	Q9HCS7	855 aa	Known RBP	4.96	□□□□□ -1.62
YBX3-210	ENST00000540975	C5AR2	Q9P296	337 aa		4.96	□□□□□ -1.62
YBX3-210	ENST00000540975	WIPI2	Q9Y4P8	454 aa		4.96	□□□□□ -1.62
YBX3-210	ENST00000540975	SELENOK	Q9Y6D0	94 aa		4.96	□□□□□ -1.62
YBX3-210	ENST00000540975	IL16	Q14005	1332 aa		4.96	□□□□□ -1.62
YBX3-210	ENST00000540975	SPATA31D1	Q6ZQQ2	1576 aa		4.95	□□□□□ -1.62
YBX3-210	ENST00000540975	ASB14	A6NK59	587 aa		4.95	□□□□□ -1.62
YBX3-210	ENST00000540975	TBX10	O75333	385 aa		4.95	□□□□□ -1.62
YBX3-210	ENST00000540975	GGPS1	O95749	300 aa		4.95	□□□□□ -1.62
YBX3-210	ENST00000540975	PDHA2	P29803	388 aa		4.95	□□□□□ -1.62
YBX3-210	ENST00000540975	IRX4	P78413	519 aa		4.95	□□□□□ -1.62
YBX3-210	ENST00000540975	SRSF9	Q13242	221 aa	Known RBP eCLIP	4.95	□□□□□ -1.62
YBX3-210	ENST00000540975	RASA2	Q15283	850 aa		4.95	□□□□□ -1.62
YBX3-210	ENST00000540975	RPUSD3	Q6P087	351 aa	Known RBP	4.95	□□□□□ -1.62
YBX3-210	ENST00000540975	P2RY8	Q86VZ1	359 aa		4.95	□□□□□ -1.62
YBX3-210	ENST00000540975	LMNTD2	Q8IXW0	634 aa		4.95	□□□□□ -1.62
YBX3-210	ENST00000540975	LSMEM1	Q8N8F7	131 aa		4.95	□□□□□ -1.62
YBX3-210	ENST00000540975	ATP8B4	Q8TF62	1192 aa		4.95	□□□□□ -1.62
YBX3-210	ENST00000540975	RMDN1	Q96DB5	314 aa		4.95	□□□□□ -1.62
YBX3-210	ENST00000540975	PGM2	Q96G03	612 aa		4.95	□□□□□ -1.62
YBX3-210	ENST00000540975	ATXN7L3B	Q96GX2	97 aa		4.95	□□□□□ -1.62
YBX3-210	ENST00000540975	NDN	Q99608	321 aa		4.95	□□□□□ -1.62
YBX3-210	ENST00000540975	SOST	Q9BQB4	213 aa		4.95	□□□□□ -1.62
YBX3-210	ENST00000540975	ANKRD2	Q9GZV1	360 aa		4.95	□□□□□ -1.62
YBX3-210	ENST00000540975	MTHFD2L	Q9H903	347 aa	Predicted RBP	4.95	□□□□□ -1.62
YBX3-210	ENST00000540975	ZHX2	Q9Y6X8	837 aa		4.95	□□□□□ -1.62
YBX3-210	ENST00000540975	MTMR11	A4FU01	709 aa		4.94	□□□□□ -1.62
YBX3-210	ENST00000540975	ERCC2	P18074	760 aa		4.94	□□□□□ -1.62
YBX3-210	ENST00000540975	DCDC1	P59894	354 aa		4.94	□□□□□ -1.62
YBX3-210	ENST00000540975	KRTAP10-3	P60369	221 aa		4.94	□□□□□ -1.62
YBX3-210	ENST00000540975	TCP11X2	Q5H9J9	407 aa		4.94	□□□□□ -1.62
YBX3-210	ENST00000540975	CYB5D1	Q6P9G0	228 aa		4.94	□□□□□ -1.62
YBX3-210	ENST00000540975	CLEC4G	Q6UXB4	293 aa		4.94	□□□□□ -1.62
YBX3-210	ENST00000540975	SLC24A5	Q71RS6	500 aa		4.94	□□□□□ -1.62
YBX3-210	ENST00000540975	ANKRD33	Q7Z3H0	272 aa		4.94	□□□□□ -1.62
YBX3-210	ENST00000540975	METTL4	Q8N3J2	472 aa		4.94	□□□□□ -1.62
YBX3-210	ENST00000540975	GBP7	Q8N8V2	638 aa	Predicted RBP	4.94	□□□□□ -1.62
YBX3-210	ENST00000540975	LRTM2	Q8N967	370 aa		4.94	□□□□□ -1.62
YBX3-210	ENST00000540975	CAMKV	Q8NCB2	501 aa		4.94	□□□□□ -1.62
YBX3-210	ENST00000540975	OR6J1	Q8NGC5	347 aa		4.94	□□□□□ -1.62
YBX3-210	ENST00000540975	MIPOL1	Q8TD10	442 aa		4.94	□□□□□ -1.62
YBX3-210	ENST00000540975	RASL10A	Q92737	203 aa		4.94	□□□□□ -1.62
YBX3-210	ENST00000540975	SLC45A3	Q96JT2	553 aa		4.94	□□□□□ -1.62
YBX3-210	ENST00000540975	BTBD9	Q96Q07	612 aa		4.94	□□□□□ -1.62
YBX3-210	ENST00000540975	PI4K2A	Q9BTU6	479 aa		4.94	□□□□□ -1.62
YBX3-210	ENST00000540975	TRIM6	Q9C030	488 aa	Predicted RBP	4.94	□□□□□ -1.62
YBX3-210	ENST00000540975	CHMP4B	Q9H444	224 aa	Known RBP	4.94	□□□□□ -1.62
YBX3-210	ENST00000540975	FZD8	Q9H461	694 aa		4.94	□□□□□ -1.62
YBX3-210	ENST00000540975	POLL	Q9UGP5	575 aa		4.94	□□□□□ -1.62
YBX3-210	ENST00000540975		A8MXE2	369 aa		4.93	□□□□□ -1.62
YBX3-210	ENST00000540975	F3	P13726	295 aa		4.93	□□□□□ -1.62
YBX3-210	ENST00000540975	MYL6B	P14649	208 aa		4.93	□□□□□ -1.62

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