RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 ZNF160Q9HCG1 818 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 FAM60AQ9NP50 221 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 GCM1Q9NP62 436 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 IL26Q9NPH9 171 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 PARVAQ9NVD7 372 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 SIRT5Q9NXA8 310 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 STMN3Q9NZ72 180 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 IL1RAPL1Q9NZN1 696 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 PTGFRNQ9P2B2 879 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 SHOC2Q9UQ13 582 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 ZNF711Q9Y462 761 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 TTLL3Q9Y4R7 772 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 TLN2Q9Y4G6 2542 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 HIVEP2P31629 2446 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 NSG1A0A0A6YYJ2 146 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 A0A1B0GX78 115 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 A0A1W2PQ72 361 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 ASPDHA6ND91 283 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 OR5H15A6NDH6 313 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 OR2AG2A6NM03 316 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 ETV2O00321 342 aaPredicted RBP4.38□□□□□ -1.71
SNHG1-214ENST00000540865 MAP2K7O14733 419 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 PROM1O43490 865 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 HCRTR1O43613 425 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 CTAG2O75638 210 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 TOXO94900 526 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 SLCO2B1O94956 709 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 TSPAN12O95859 305 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 MT-CYBP00156 380 aaPredicted RBP4.38□□□□□ -1.71
SNHG1-214ENST00000540865 SLC4A1P02730 911 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 KRT1P04264 644 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 HLA-DQB2P05538 268 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 PBLDP30039 288 aaPredicted RBP4.38□□□□□ -1.71
SNHG1-214ENST00000540865 CHRNB4P30926 498 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 MC3RP41968 323 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 CD86P42081 329 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 NSG1P42857 185 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 RAB28P51157 221 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 POLR2FP61218 127 aaKnown RBP4.38□□□□□ -1.71
SNHG1-214ENST00000540865 AP2B1P63010 937 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 TMPRSS15P98073 1019 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 ALDH6A1Q02252 535 aaKnown RBP4.38□□□□□ -1.71
SNHG1-214ENST00000540865 MYBPHQ13203 477 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 OLIG2Q13516 323 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 BECN1Q14457 450 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 ZIC1Q15915 447 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 TPD52L1Q16890 204 aaPredicted RBP4.38□□□□□ -1.71
SNHG1-214ENST00000540865 DEFB110Q30KQ9 67 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 BCL7AQ4VC05 210 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 ZNF766Q5HY98 468 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 FNBP1LQ5T0N5 605 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 MROH9Q5TGP6 573 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 STEAP3Q658P3 488 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 ATG9BQ674R7 924 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 TMEM211Q6ICI0 200 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 ACAD10Q6JQN1 1059 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 HIBCHQ6NVY1 386 aaPredicted RBP4.38□□□□□ -1.71
SNHG1-214ENST00000540865 ABHD17CQ6PCB6 329 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 TTLL10Q6ZVT0 673 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 NCCRP1Q6ZVX7 275 aaPredicted RBP4.38□□□□□ -1.71
SNHG1-214ENST00000540865 Q71RC1 249 aaPredicted RBP4.38□□□□□ -1.71
SNHG1-214ENST00000540865 COX15Q7KZN9 410 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 NDUFAF7Q7L592 441 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 HSCBQ8IWL3 235 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 ZC3H7AQ8IWR0 971 aaKnown RBP4.38□□□□□ -1.71
SNHG1-214ENST00000540865 ADGRF3Q8IZF5 1079 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 GHDCQ8N2G8 530 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 DNAJC22Q8N4W6 341 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 LILRB4Q8NHJ6 448 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 ZNF653Q96CK0 615 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 PEX11GQ96HA9 241 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 RMDN2Q96LZ7 410 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 AGPAT1Q99943 283 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 SMR3AQ99954 134 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 SYT3Q9BQG1 590 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 CRB3Q9BUF7 120 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 DEF6Q9H4E7 631 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 MVB12BQ9H7P6 319 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 PCDH18Q9HCL0 1135 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 KCNJ16Q9NPI9 418 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.38□□□□□ -1.71
SNHG1-214ENST00000540865 IRAK4Q9NWZ3 460 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 EURLQ9NYK6 297 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 PLCL2Q9UPR0 1127 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 CACNA1CQ13936 2221 aa4.38□□□□□ -1.71
SNHG1-214ENST00000540865 NCOA6Q14686 2063 aaPredicted RBP4.37□□□□□ -1.71
SNHG1-214ENST00000540865 A0A0J9YY10 115 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 TCRBV16S1A1N1A0A5B0 115 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 FAM47E-STBD1D6RA91 191 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 NPIPA5E9PKD4 350 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 FAM227AF5H4B4 570 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 IFRD1O00458 451 aaPredicted RBP4.37□□□□□ -1.71
SNHG1-214ENST00000540865 PES1O00541 588 aaKnown RBP4.37□□□□□ -1.71
SNHG1-214ENST00000540865 DSCR3O14972 297 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 TTI1O43156 1089 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 ASNA1O43681 348 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 KLK8O60259 260 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 UGT1A9O60656 530 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 DNAJC8O75937 253 aaPredicted RBP4.37□□□□□ -1.71
SNHG1-214ENST00000540865 F10P00742 488 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms