RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 CCDC126Q96EE4 140 aa14.83□□□□□ -0.04
DDB1-218ENST00000540784 APOPT1Q96IL0 206 aa14.83□□□□□ -0.04
DDB1-218ENST00000540784 ZNF285Q96NJ3 590 aa14.83□□□□□ -0.04
DDB1-218ENST00000540784 SPRY4Q9C004 299 aa14.83□□□□□ -0.04
DDB1-218ENST00000540784 STARD5Q9NSY2 213 aa14.83□□□□□ -0.04
DDB1-218ENST00000540784 MKS1Q9NXB0 559 aa14.83□□□□□ -0.04
DDB1-218ENST00000540784 ACSL6Q9UKU0 697 aa14.83□□□□□ -0.04
DDB1-218ENST00000540784 PLLPQ9Y342 182 aa14.83□□□□□ -0.04
DDB1-218ENST00000540784 TMEM184BQ9Y519 407 aaPredicted RBP14.83□□□□□ -0.04
DDB1-218ENST00000540784 PCDHB3Q9Y5E6 796 aa14.83□□□□□ -0.04
DDB1-218ENST00000540784 TRBC2A0A5B9 178 aa14.82□□□□□ -0.04
DDB1-218ENST00000540784 TMEM8BA6NDV4 472 aa14.82□□□□□ -0.04
DDB1-218ENST00000540784 A8MT66 165 aa14.82□□□□□ -0.04
DDB1-218ENST00000540784 H3BMH7 237 aa14.82□□□□□ -0.04
DDB1-218ENST00000540784 TXNDC9O14530 226 aa14.82□□□□□ -0.04
DDB1-218ENST00000540784 ZSCAN9O15535 394 aaPredicted RBP14.82□□□□□ -0.04
DDB1-218ENST00000540784 PLIN3O60664 434 aa14.82□□□□□ -0.04
DDB1-218ENST00000540784 KATNA1O75449 491 aa14.82□□□□□ -0.04
DDB1-218ENST00000540784 CCNYL3P0C7X3 344 aa14.82□□□□□ -0.04
DDB1-218ENST00000540784 MYL2P10916 166 aa14.82□□□□□ -0.04
DDB1-218ENST00000540784 CPA3P15088 417 aa14.82□□□□□ -0.04
DDB1-218ENST00000540784 IMPDH1P20839 514 aa14.82□□□□□ -0.04
DDB1-218ENST00000540784 VARSP26640 1264 aaKnown RBP14.82□□□□□ -0.04
DDB1-218ENST00000540784 PRKAA2P54646 552 aa14.82□□□□□ -0.04
DDB1-218ENST00000540784 PCBP4P57723 403 aaKnown RBP14.82□□□□□ -0.04
DDB1-218ENST00000540784 LAPTM5Q13571 262 aa14.82□□□□□ -0.04
DDB1-218ENST00000540784 DOC2AQ14183 400 aa14.82□□□□□ -0.04
DDB1-218ENST00000540784 GRM7Q14831 915 aa14.82□□□□□ -0.04
DDB1-218ENST00000540784 RBBP5Q15291 538 aaKnown RBP14.82□□□□□ -0.04
DDB1-218ENST00000540784 HIST2H2ACQ16777 129 aaPredicted RBP14.82□□□□□ -0.04
DDB1-218ENST00000540784 FAM214AQ32MH5 1076 aa14.82□□□□□ -0.04
DDB1-218ENST00000540784 PRAMEF17Q5VTA0 474 aa14.82□□□□□ -0.04
DDB1-218ENST00000540784 HIST2H2AA3Q6FI13 130 aa14.82□□□□□ -0.04
DDB1-218ENST00000540784 C6orf15Q6UXA7 325 aaPredicted RBP14.82□□□□□ -0.04
DDB1-218ENST00000540784 ZYG11AQ6WRX3 759 aa14.82□□□□□ -0.04
DDB1-218ENST00000540784 EXOC3L1Q86VI1 746 aa14.82□□□□□ -0.04
DDB1-218ENST00000540784 KRT78Q8N1N4 520 aa14.82□□□□□ -0.04
DDB1-218ENST00000540784 TTC29Q8NA56 475 aaPredicted RBP14.82□□□□□ -0.04
DDB1-218ENST00000540784 MFSD9Q8NBP5 474 aa14.82□□□□□ -0.04
DDB1-218ENST00000540784 RDH11Q8TC12 318 aa14.82□□□□□ -0.04
DDB1-218ENST00000540784 PPP4R1Q8TF05 950 aa14.82□□□□□ -0.04
DDB1-218ENST00000540784 ATP6V1E2Q96A05 226 aa14.82□□□□□ -0.04
DDB1-218ENST00000540784 RNF31Q96EP0 1072 aa14.82□□□□□ -0.04
DDB1-218ENST00000540784 NDC1Q9BTX1 674 aa14.82□□□□□ -0.04
DDB1-218ENST00000540784 NLNQ9BYT8 704 aa14.82□□□□□ -0.04
DDB1-218ENST00000540784 C12orf65Q9H3J6 166 aaKnown RBP14.82□□□□□ -0.04
DDB1-218ENST00000540784 EHD1Q9H4M9 534 aa14.82□□□□□ -0.04
DDB1-218ENST00000540784 IPPKQ9H8X2 491 aa14.82□□□□□ -0.04
DDB1-218ENST00000540784 ACTR5Q9H9F9 607 aaPredicted RBP14.82□□□□□ -0.04
DDB1-218ENST00000540784 HYKKA2RU49 373 aa14.81□□□□□ -0.04
DDB1-218ENST00000540784 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.81□□□□□ -0.04
DDB1-218ENST00000540784 G3V2L1 256 aa14.81□□□□□ -0.04
DDB1-218ENST00000540784 E2F3O00716 465 aa14.81□□□□□ -0.04
DDB1-218ENST00000540784 TLX3O43711 291 aaPredicted RBP14.81□□□□□ -0.04
DDB1-218ENST00000540784 CPNE3O75131 537 aaKnown RBP14.81□□□□□ -0.04
DDB1-218ENST00000540784 KLK3P07288 261 aaPredicted RBP14.81□□□□□ -0.04
DDB1-218ENST00000540784 CREB1P16220 341 aa14.81□□□□□ -0.04
DDB1-218ENST00000540784 EPORP19235 508 aa14.81□□□□□ -0.04
DDB1-218ENST00000540784 ALAS2P22557 587 aa14.81□□□□□ -0.04
DDB1-218ENST00000540784 BCL6P41182 706 aa14.81□□□□□ -0.04
DDB1-218ENST00000540784 CASP2P42575 452 aa14.81□□□□□ -0.04
DDB1-218ENST00000540784 ARSFP54793 590 aa14.81□□□□□ -0.04
DDB1-218ENST00000540784 HERVK_113P63132 956 aa14.81□□□□□ -0.04
DDB1-218ENST00000540784 NFKB2Q00653 900 aa14.81□□□□□ -0.04
DDB1-218ENST00000540784 CHIT1Q13231 466 aa14.81□□□□□ -0.04
DDB1-218ENST00000540784 TBCCQ15814 346 aa14.81□□□□□ -0.04
DDB1-218ENST00000540784 TNFAIP8L3Q5GJ75 292 aa14.81□□□□□ -0.04
DDB1-218ENST00000540784 PAGE2BQ5JRK9 111 aa14.81□□□□□ -0.04
DDB1-218ENST00000540784 YOD1Q5VVQ6 348 aaPredicted RBP14.81□□□□□ -0.04
DDB1-218ENST00000540784 GOLGA7Q7Z5G4 137 aa14.81□□□□□ -0.04
DDB1-218ENST00000540784 NLGN4XQ8N0W4 816 aa14.81□□□□□ -0.04
DDB1-218ENST00000540784 CSNK1A1LQ8N752 337 aa14.81□□□□□ -0.04
DDB1-218ENST00000540784 GALNT6Q8NCL4 622 aa14.81□□□□□ -0.04
DDB1-218ENST00000540784 ZNF248Q8NDW4 579 aa14.81□□□□□ -0.04
DDB1-218ENST00000540784 ZNF740Q8NDX6 193 aa14.81□□□□□ -0.04
DDB1-218ENST00000540784 NLGN4YQ8NFZ3 816 aaPredicted RBP14.81□□□□□ -0.04
DDB1-218ENST00000540784 TCP10LQ8TDR4 215 aa14.81□□□□□ -0.04
DDB1-218ENST00000540784 WDR34Q96EX3 536 aa14.81□□□□□ -0.04
DDB1-218ENST00000540784 PTCD3Q96EY7 689 aaKnown RBP14.81□□□□□ -0.04
DDB1-218ENST00000540784 SARGQ9BW04 601 aa14.81□□□□□ -0.04
DDB1-218ENST00000540784 ERVK-6Q9BXR3 956 aa14.81□□□□□ -0.04
DDB1-218ENST00000540784 PITHD1Q9GZP4 211 aaPredicted RBP14.81□□□□□ -0.04
DDB1-218ENST00000540784 NT5DC2Q9H857 520 aa14.81□□□□□ -0.04
DDB1-218ENST00000540784 NOL11Q9H8H0 719 aaKnown RBP14.81□□□□□ -0.04
DDB1-218ENST00000540784 TMBIM4Q9HC24 238 aa14.81□□□□□ -0.04
DDB1-218ENST00000540784 ENAMQ9NRM1 1142 aa14.81□□□□□ -0.04
DDB1-218ENST00000540784 GEMIN8Q9NWZ8 242 aaKnown RBP14.81□□□□□ -0.04
DDB1-218ENST00000540784 MID2Q9UJV3 735 aa14.81□□□□□ -0.04
DDB1-218ENST00000540784 PADI1Q9ULC6 663 aa14.81□□□□□ -0.04
DDB1-218ENST00000540784 PCDHGA4Q9Y5G9 962 aa14.81□□□□□ -0.04
DDB1-218ENST00000540784 FITM1A5D6W6 292 aa14.8□□□□□ -0.04
DDB1-218ENST00000540784 RAD1O60671 282 aa14.8□□□□□ -0.04
DDB1-218ENST00000540784 PRAMEF4O60810 478 aa14.8□□□□□ -0.04
DDB1-218ENST00000540784 WFS1O76024 890 aa14.8□□□□□ -0.04
DDB1-218ENST00000540784 SUPT7LO94864 414 aa14.8□□□□□ -0.04
DDB1-218ENST00000540784 LIPCP11150 499 aa14.8□□□□□ -0.04
DDB1-218ENST00000540784 AHRP35869 848 aa14.8□□□□□ -0.04
DDB1-218ENST00000540784 SCTRP47872 440 aa14.8□□□□□ -0.04
DDB1-218ENST00000540784 REEP5Q00765 189 aa14.8□□□□□ -0.04
DDB1-218ENST00000540784 PCDH1Q08174 1060 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms