RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 CDH1P12830 882 aa13.71□□□□□ -0.21
CYB561A3-216ENST00000540755 ACPPP15309 386 aa13.71□□□□□ -0.21
CYB561A3-216ENST00000540755 PCSK2P16519 638 aa13.71□□□□□ -0.21
CYB561A3-216ENST00000540755 CXCR2P25025 360 aa13.71□□□□□ -0.21
CYB561A3-216ENST00000540755 NEK2P51955 445 aa13.71□□□□□ -0.21
CYB561A3-216ENST00000540755 RPL38P63173 70 aaKnown RBP13.71□□□□□ -0.21
CYB561A3-216ENST00000540755 UBE2IP63279 158 aaKnown RBP13.71□□□□□ -0.21
CYB561A3-216ENST00000540755 PRDX1Q06830 199 aaKnown RBP13.71□□□□□ -0.21
CYB561A3-216ENST00000540755 RIPK1Q13546 671 aa13.71□□□□□ -0.21
CYB561A3-216ENST00000540755 RPS6KA2Q15349 733 aa13.71□□□□□ -0.21
CYB561A3-216ENST00000540755 ELOCQ15369 112 aa13.71□□□□□ -0.21
CYB561A3-216ENST00000540755 AASDHQ4L235 1098 aaPredicted RBP13.71□□□□□ -0.21
CYB561A3-216ENST00000540755 RFTN2Q52LD8 501 aaPredicted RBP13.71□□□□□ -0.21
CYB561A3-216ENST00000540755 AGKQ53H12 422 aa13.71□□□□□ -0.21
CYB561A3-216ENST00000540755 PRRT3Q5FWE3 981 aa13.71□□□□□ -0.21
CYB561A3-216ENST00000540755 ICE2Q659A1 982 aa13.71□□□□□ -0.21
CYB561A3-216ENST00000540755 PAOXQ6QHF9 649 aa13.71□□□□□ -0.21
CYB561A3-216ENST00000540755 RINLQ6ZS11 566 aa13.71□□□□□ -0.21
CYB561A3-216ENST00000540755 AMIGO1Q86WK6 493 aa13.71□□□□□ -0.21
CYB561A3-216ENST00000540755 SNX32Q86XE0 403 aa13.71□□□□□ -0.21
CYB561A3-216ENST00000540755 TRIM48Q8IWZ4 208 aa13.71□□□□□ -0.21
CYB561A3-216ENST00000540755 KRT78Q8N1N4 520 aa13.71□□□□□ -0.21
CYB561A3-216ENST00000540755 LCN9Q8WX39 176 aa13.71□□□□□ -0.21
CYB561A3-216ENST00000540755 METTL2AQ96IZ6 378 aaKnown RBP13.71□□□□□ -0.21
CYB561A3-216ENST00000540755 C1orf50Q9BV19 199 aa13.71□□□□□ -0.21
CYB561A3-216ENST00000540755 TWSG1Q9GZX9 223 aa13.71□□□□□ -0.21
CYB561A3-216ENST00000540755 NT5DC2Q9H857 520 aa13.71□□□□□ -0.21
CYB561A3-216ENST00000540755 SLC40A1Q9NP59 571 aa13.71□□□□□ -0.21
CYB561A3-216ENST00000540755 ZIM2Q9NZV7 527 aa13.71□□□□□ -0.21
CYB561A3-216ENST00000540755 TMED5Q9Y3A6 229 aa13.71□□□□□ -0.21
CYB561A3-216ENST00000540755 FOXE1O00358 373 aaPredicted RBP13.7□□□□□ -0.22
CYB561A3-216ENST00000540755 GYG2O15488 501 aa13.7□□□□□ -0.22
CYB561A3-216ENST00000540755 CCNDBP1O95273 360 aa13.7□□□□□ -0.22
CYB561A3-216ENST00000540755 VIPP01282 170 aa13.7□□□□□ -0.22
CYB561A3-216ENST00000540755 CD1EP15812 388 aa13.7□□□□□ -0.22
CYB561A3-216ENST00000540755 PSMB5P28074 263 aa13.7□□□□□ -0.22
CYB561A3-216ENST00000540755 CCR8P51685 355 aa13.7□□□□□ -0.22
CYB561A3-216ENST00000540755 AFF3P51826 1226 aaKnown RBP13.7□□□□□ -0.22
CYB561A3-216ENST00000540755 ABATP80404 500 aa13.7□□□□□ -0.22
CYB561A3-216ENST00000540755 KIAA0040Q15053 153 aa13.7□□□□□ -0.22
CYB561A3-216ENST00000540755 DNAL1Q4LDG9 190 aa13.7□□□□□ -0.22
CYB561A3-216ENST00000540755 IL23RQ5VWK5 629 aa13.7□□□□□ -0.22
CYB561A3-216ENST00000540755 PMS2CLQ68D20 193 aa13.7□□□□□ -0.22
CYB561A3-216ENST00000540755 GK5Q6ZS86 529 aa13.7□□□□□ -0.22
CYB561A3-216ENST00000540755 ARMCX6Q7L4S7 300 aa13.7□□□□□ -0.22
CYB561A3-216ENST00000540755 GKN2Q86XP6 184 aa13.7□□□□□ -0.22
CYB561A3-216ENST00000540755 NAGSQ8N159 534 aa13.7□□□□□ -0.22
CYB561A3-216ENST00000540755 SDR16C5Q8N3Y7 309 aa13.7□□□□□ -0.22
CYB561A3-216ENST00000540755 KIF2BQ8N4N8 673 aa13.7□□□□□ -0.22
CYB561A3-216ENST00000540755 RBM15BQ8NDT2 890 aaKnown RBP13.7□□□□□ -0.22
CYB561A3-216ENST00000540755 OR4K1Q8NGD4 311 aa13.7□□□□□ -0.22
CYB561A3-216ENST00000540755 OR2A1Q8NGT9 310 aa13.7□□□□□ -0.22
CYB561A3-216ENST00000540755 HUS1BQ8NHY5 278 aa13.7□□□□□ -0.22
CYB561A3-216ENST00000540755 AIF1LQ9BQI0 150 aa13.7□□□□□ -0.22
CYB561A3-216ENST00000540755 ACAT2Q9BWD1 397 aa13.7□□□□□ -0.22
CYB561A3-216ENST00000540755 CAAP1Q9H8G2 361 aa13.7□□□□□ -0.22
CYB561A3-216ENST00000540755 CCDC167Q9P0B6 97 aa13.7□□□□□ -0.22
CYB561A3-216ENST00000540755 CPNE7Q9UBL6 633 aa13.7□□□□□ -0.22
CYB561A3-216ENST00000540755 SPASTQ9UBP0 616 aa13.7□□□□□ -0.22
CYB561A3-216ENST00000540755 ADGRE2Q9UHX3 823 aa13.7□□□□□ -0.22
CYB561A3-216ENST00000540755 PPT2Q9UMR5 302 aa13.7□□□□□ -0.22
CYB561A3-216ENST00000540755 EIF3LQ9Y262 564 aaKnown RBP13.7□□□□□ -0.22
CYB561A3-216ENST00000540755 POLR3HQ9Y535 204 aaPredicted RBP13.7□□□□□ -0.22
CYB561A3-216ENST00000540755 TRBV23OR9-2A0A075B6M9 112 aa13.69□□□□□ -0.22
CYB561A3-216ENST00000540755 FAM221BA6H8Z2 402 aa13.69□□□□□ -0.22
CYB561A3-216ENST00000540755 SEC22BO75396 215 aa13.69□□□□□ -0.22
CYB561A3-216ENST00000540755 SNRNP200O75643 2136 aaKnown RBP13.69□□□□□ -0.22
CYB561A3-216ENST00000540755 SNRPB2P08579 225 aaKnown RBP13.69□□□□□ -0.22
CYB561A3-216ENST00000540755 PCNAP12004 261 aa13.69□□□□□ -0.22
CYB561A3-216ENST00000540755 AMD1P17707 334 aa13.69□□□□□ -0.22
CYB561A3-216ENST00000540755 PEBP1P30086 187 aaKnown RBP13.69□□□□□ -0.22
CYB561A3-216ENST00000540755 CPOXP36551 454 aa13.69□□□□□ -0.22
CYB561A3-216ENST00000540755 PIK3CBP42338 1070 aa13.69□□□□□ -0.22
CYB561A3-216ENST00000540755 C21orf59P57076 290 aa13.69□□□□□ -0.22
CYB561A3-216ENST00000540755 KCNJ2P63252 427 aa13.69□□□□□ -0.22
CYB561A3-216ENST00000540755 PHEXP78562 749 aa13.69□□□□□ -0.22
CYB561A3-216ENST00000540755 MXRA7P84157 204 aa13.69□□□□□ -0.22
CYB561A3-216ENST00000540755 REEP5Q00765 189 aa13.69□□□□□ -0.22
CYB561A3-216ENST00000540755 STX5Q13190 355 aa13.69□□□□□ -0.22
CYB561A3-216ENST00000540755 C1orf61Q13536 156 aa13.69□□□□□ -0.22
CYB561A3-216ENST00000540755 ZNF423Q2M1K9 1284 aa13.69□□□□□ -0.22
CYB561A3-216ENST00000540755 STPG1Q5TH74 334 aa13.69□□□□□ -0.22
CYB561A3-216ENST00000540755 LYSMD4Q5XG99 296 aa13.69□□□□□ -0.22
CYB561A3-216ENST00000540755 TMIGD1Q6UXZ0 262 aa13.69□□□□□ -0.22
CYB561A3-216ENST00000540755 SLC9B2Q86UD5 537 aa13.69□□□□□ -0.22
CYB561A3-216ENST00000540755 FUNDC1Q8IVP5 155 aa13.69□□□□□ -0.22
CYB561A3-216ENST00000540755 RBM12BQ8IXT5 1001 aaKnown RBP13.69□□□□□ -0.22
CYB561A3-216ENST00000540755 AVL9Q8NBF6 648 aa13.69□□□□□ -0.22
CYB561A3-216ENST00000540755 OR9I1Q8NGQ6 314 aa13.69□□□□□ -0.22
CYB561A3-216ENST00000540755 ZDHHC1Q8WTX9 485 aa13.69□□□□□ -0.22
CYB561A3-216ENST00000540755 TSPEARQ8WU66 669 aa13.69□□□□□ -0.22
CYB561A3-216ENST00000540755 FCRL1Q96LA6 429 aa13.69□□□□□ -0.22
CYB561A3-216ENST00000540755 MTERF1Q99551 399 aaKnown RBP13.69□□□□□ -0.22
CYB561A3-216ENST00000540755 SLC25A23Q9BV35 468 aa13.69□□□□□ -0.22
CYB561A3-216ENST00000540755 TBC1D10AQ9BXI6 508 aa13.69□□□□□ -0.22
CYB561A3-216ENST00000540755 SPNS1Q9H2V7 528 aa13.69□□□□□ -0.22
CYB561A3-216ENST00000540755 SRMSQ9H3Y6 488 aa13.69□□□□□ -0.22
CYB561A3-216ENST00000540755 CUEDC1Q9NWM3 386 aaPredicted RBP13.69□□□□□ -0.22
CYB561A3-216ENST00000540755 VPS29Q9UBQ0 182 aa13.69□□□□□ -0.22
CYB561A3-216ENST00000540755 GON4LQ3T8J9 2241 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms