RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 HP1BP3Q5SSJ5 553 aaPredicted RBP19.93■□□□□ 0.78
CHFR-217ENST00000540537 AGAP7PQ5VUJ5 663 aa19.93■□□□□ 0.78
CHFR-217ENST00000540537 ATG9BQ674R7 924 aa19.93■□□□□ 0.78
CHFR-217ENST00000540537 AGTRAPQ6RW13 159 aa19.93■□□□□ 0.78
CHFR-217ENST00000540537 MBOAT1Q6ZNC8 495 aa19.93■□□□□ 0.78
CHFR-217ENST00000540537 Q6ZS92 163 aa19.93■□□□□ 0.78
CHFR-217ENST00000540537 PLD3Q8IV08 490 aa19.93■□□□□ 0.78
CHFR-217ENST00000540537 AMER3Q8N944 861 aa19.93■□□□□ 0.78
CHFR-217ENST00000540537 THAP11Q96EK4 314 aa19.93■□□□□ 0.78
CHFR-217ENST00000540537 MMABQ96EY8 250 aaPredicted RBP19.93■□□□□ 0.78
CHFR-217ENST00000540537 PWWP2AQ96N64 755 aa19.93■□□□□ 0.78
CHFR-217ENST00000540537 AGAP4Q96P64 663 aa19.93■□□□□ 0.78
CHFR-217ENST00000540537 SLC29A3Q9BZD2 475 aa19.93■□□□□ 0.78
CHFR-217ENST00000540537 TGIF2Q9GZN2 237 aa19.93■□□□□ 0.78
CHFR-217ENST00000540537 LHPPQ9H008 270 aa19.93■□□□□ 0.78
CHFR-217ENST00000540537 MKKSQ9NPJ1 570 aaPredicted RBP19.93■□□□□ 0.78
CHFR-217ENST00000540537 USP9YO00507 2555 aaPredicted RBP19.92■□□□□ 0.78
CHFR-217ENST00000540537 KCNE1BA0A087WTH5 132 aa19.92■□□□□ 0.78
CHFR-217ENST00000540537 PCDH17O14917 1159 aa19.92■□□□□ 0.78
CHFR-217ENST00000540537 TTI1O43156 1089 aa19.92■□□□□ 0.78
CHFR-217ENST00000540537 PAFAH1B1P43034 410 aa19.92■□□□□ 0.78
CHFR-217ENST00000540537 IL2P60568 153 aa19.92■□□□□ 0.78
CHFR-217ENST00000540537 PDAP1Q13442 181 aaKnown RBP19.92■□□□□ 0.78
CHFR-217ENST00000540537 PHKG1Q16816 387 aa19.92■□□□□ 0.78
CHFR-217ENST00000540537 HECTD2Q5U5R9 776 aa19.92■□□□□ 0.78
CHFR-217ENST00000540537 FAM45BPQ6NSW5 357 aa19.92■□□□□ 0.78
CHFR-217ENST00000540537 TRMT10BQ6PF06 316 aaKnown RBP19.92■□□□□ 0.78
CHFR-217ENST00000540537 IGFL2Q6UWQ7 119 aa19.92■□□□□ 0.78
CHFR-217ENST00000540537 C17orf64Q86WR6 236 aa19.92■□□□□ 0.78
CHFR-217ENST00000540537 PARP9Q8IXQ6 854 aa19.92■□□□□ 0.78
CHFR-217ENST00000540537 GPATCH11Q8N954 259 aa19.92■□□□□ 0.78
CHFR-217ENST00000540537 FAM45AQ8TCE6 357 aa19.92■□□□□ 0.78
CHFR-217ENST00000540537 SNF8Q96H20 258 aa19.92■□□□□ 0.78
CHFR-217ENST00000540537 WDR77Q9BQA1 342 aaPredicted RBP19.92■□□□□ 0.78
CHFR-217ENST00000540537 SGPP1Q9BX95 441 aa19.92■□□□□ 0.78
CHFR-217ENST00000540537 ILKAPQ9H0C8 392 aaPredicted RBP19.92■□□□□ 0.78
CHFR-217ENST00000540537 ZBTB20Q9HC78 741 aaPredicted RBP19.92■□□□□ 0.78
CHFR-217ENST00000540537 RNF14Q9UBS8 474 aa19.92■□□□□ 0.78
CHFR-217ENST00000540537 SPTAN1Q13813 2472 aaKnown RBP19.92■□□□□ 0.78
CHFR-217ENST00000540537 A0A0A6YYC8 382 aaPredicted RBP19.91■□□□□ 0.78
CHFR-217ENST00000540537 A0A1W2PQ72 361 aa19.91■□□□□ 0.78
CHFR-217ENST00000540537 IDSB3KWA1 339 aa19.91■□□□□ 0.78
CHFR-217ENST00000540537 I3L1I5 382 aaPredicted RBP19.91■□□□□ 0.78
CHFR-217ENST00000540537 HIST1H2AGP0C0S8 130 aaPredicted RBP19.91■□□□□ 0.78
CHFR-217ENST00000540537 HIST1H2ADP20671 130 aa19.91■□□□□ 0.78
CHFR-217ENST00000540537 FDXRP22570 491 aa19.91■□□□□ 0.78
CHFR-217ENST00000540537 EMP2P54851 167 aa19.91■□□□□ 0.78
CHFR-217ENST00000540537 CSNK1G2P78368 415 aa19.91■□□□□ 0.78
CHFR-217ENST00000540537 Q0VFX4 171 aa19.91■□□□□ 0.78
CHFR-217ENST00000540537 NAE1Q13564 534 aa19.91■□□□□ 0.78
CHFR-217ENST00000540537 LCTLQ6UWM7 567 aa19.91■□□□□ 0.78
CHFR-217ENST00000540537 VN1R4Q7Z5H5 301 aa19.91■□□□□ 0.78
CHFR-217ENST00000540537 LAPTM4BQ86VI4 370 aa19.91■□□□□ 0.78
CHFR-217ENST00000540537 PPP4R1Q8TF05 950 aa19.91■□□□□ 0.78
CHFR-217ENST00000540537 HIST1H2AHQ96KK5 128 aa19.91■□□□□ 0.78
CHFR-217ENST00000540537 HIST1H2AJQ99878 128 aa19.91■□□□□ 0.78
CHFR-217ENST00000540537 MESP1Q9BRJ9 268 aa19.91■□□□□ 0.78
CHFR-217ENST00000540537 H2AFJQ9BTM1 129 aa19.91■□□□□ 0.78
CHFR-217ENST00000540537 YIPF2Q9BWQ6 316 aa19.91■□□□□ 0.78
CHFR-217ENST00000540537 ATG10Q9H0Y0 220 aa19.91■□□□□ 0.78
CHFR-217ENST00000540537 MAP10Q9P2G4 905 aa19.91■□□□□ 0.78
CHFR-217ENST00000540537 PYCARDQ9ULZ3 195 aa19.91■□□□□ 0.78
CHFR-217ENST00000540537 VWA7Q9Y334 891 aa19.91■□□□□ 0.78
CHFR-217ENST00000540537 SPTBN1Q01082 2364 aaKnown RBP19.91■□□□□ 0.78
CHFR-217ENST00000540537 FFAR3O14843 346 aa19.9■□□□□ 0.78
CHFR-217ENST00000540537 TP73O15350 636 aa19.9■□□□□ 0.78
CHFR-217ENST00000540537 GPR42O15529 346 aa19.9■□□□□ 0.78
CHFR-217ENST00000540537 AVPR1BP47901 424 aa19.9■□□□□ 0.78
CHFR-217ENST00000540537 AP1S2P56377 157 aa19.9■□□□□ 0.78
CHFR-217ENST00000540537 CAPN13Q6MZZ7 669 aaPredicted RBP19.9■□□□□ 0.78
CHFR-217ENST00000540537 NDUFAF7Q7L592 441 aa19.9■□□□□ 0.78
CHFR-217ENST00000540537 C8orf44Q96CB5 159 aa19.9■□□□□ 0.78
CHFR-217ENST00000540537 SNRNP40Q96DI7 357 aaKnown RBP19.9■□□□□ 0.78
CHFR-217ENST00000540537 THOC3Q96J01 351 aaKnown RBP19.9■□□□□ 0.78
CHFR-217ENST00000540537 HAUS8Q9BT25 410 aa19.9■□□□□ 0.78
CHFR-217ENST00000540537 EPS8L2Q9H6S3 715 aa19.9■□□□□ 0.78
CHFR-217ENST00000540537 ZNF160Q9HCG1 818 aa19.9■□□□□ 0.78
CHFR-217ENST00000540537 SH2B3Q9UQQ2 575 aa19.9■□□□□ 0.78
CHFR-217ENST00000540537 PCDHGA10Q9Y5H3 936 aa19.9■□□□□ 0.78
CHFR-217ENST00000540537 HIVEP3Q5T1R4 2406 aa19.9■□□□□ 0.78
CHFR-217ENST00000540537 NSG1A0A0A6YYJ2 146 aa19.89■□□□□ 0.77
CHFR-217ENST00000540537 PABPN1LA6NDY0 278 aaKnown RBP19.89■□□□□ 0.77
CHFR-217ENST00000540537 EFCAB8A8MWE9 144 aa19.89■□□□□ 0.77
CHFR-217ENST00000540537 TCP11X1B4DZS4 312 aa19.89■□□□□ 0.77
CHFR-217ENST00000540537 H0YIG0 161 aa19.89■□□□□ 0.77
CHFR-217ENST00000540537 NDC80O14777 642 aa19.89■□□□□ 0.77
CHFR-217ENST00000540537 NSA2O95478 260 aaKnown RBP19.89■□□□□ 0.77
CHFR-217ENST00000540537 HEXBP07686 556 aa19.89■□□□□ 0.77
CHFR-217ENST00000540537 COX6A1P12074 109 aa19.89■□□□□ 0.77
CHFR-217ENST00000540537 CXCR2P25025 360 aa19.89■□□□□ 0.77
CHFR-217ENST00000540537 MGAT5Q09328 741 aa19.89■□□□□ 0.77
CHFR-217ENST00000540537 CRB2Q5IJ48 1285 aa19.89■□□□□ 0.77
CHFR-217ENST00000540537 FHL5Q5TD97 284 aa19.89■□□□□ 0.77
CHFR-217ENST00000540537 DUPD1Q68J44 220 aa19.89■□□□□ 0.77
CHFR-217ENST00000540537 CUZD1Q86UP6 607 aa19.89■□□□□ 0.77
CHFR-217ENST00000540537 ZC3H7AQ8IWR0 971 aaKnown RBP19.89■□□□□ 0.77
CHFR-217ENST00000540537 CAMKVQ8NCB2 501 aa19.89■□□□□ 0.77
CHFR-217ENST00000540537 C19orf60Q96EN9 201 aa19.89■□□□□ 0.77
CHFR-217ENST00000540537 OLFM1Q99784 485 aa19.89■□□□□ 0.77
CHFR-217ENST00000540537 TRIM54Q9BYV2 358 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms