RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 SPTY2D1-AS1A0A0U1RR47 76 aa16.27■□□□□ 0.19
COPS3-212ENST00000539941 A0A1W2PP18 115 aa16.27■□□□□ 0.19
COPS3-212ENST00000539941 FOXE1O00358 373 aaPredicted RBP16.27■□□□□ 0.19
COPS3-212ENST00000539941 RASGRP1O95267 797 aa16.27■□□□□ 0.19
COPS3-212ENST00000539941 CD27P26842 260 aa16.27■□□□□ 0.19
COPS3-212ENST00000539941 POLR2JP52435 117 aaKnown RBP16.27■□□□□ 0.19
COPS3-212ENST00000539941 ILF3Q12906 894 aaKnown RBP eCLIP16.27■□□□□ 0.19
COPS3-212ENST00000539941 SLBPQ14493 270 aaKnown RBP eCLIP16.27■□□□□ 0.19
COPS3-212ENST00000539941 TRMT5Q32P41 509 aaKnown RBP16.27■□□□□ 0.19
COPS3-212ENST00000539941 CATSPEREQ5SY80 951 aa16.27■□□□□ 0.19
COPS3-212ENST00000539941 BNC2Q6ZN30 1099 aaPredicted RBP16.27■□□□□ 0.19
COPS3-212ENST00000539941 HID1Q8IV36 788 aa16.27■□□□□ 0.19
COPS3-212ENST00000539941 SLC22A18ASQ8N1D0 253 aa16.27■□□□□ 0.19
COPS3-212ENST00000539941 RLN3Q8WXF3 142 aa16.27■□□□□ 0.19
COPS3-212ENST00000539941 SH3KBP1Q96B97 665 aa16.27■□□□□ 0.19
COPS3-212ENST00000539941 TMEM168Q9H0V1 697 aa16.27■□□□□ 0.19
COPS3-212ENST00000539941 PTTG2Q9NZH5 202 aa16.27■□□□□ 0.19
COPS3-212ENST00000539941 VPS29Q9UBQ0 182 aa16.27■□□□□ 0.19
COPS3-212ENST00000539941 TBC1D29Q9UFV1 150 aa16.27■□□□□ 0.19
COPS3-212ENST00000539941 SLC7A8Q9UHI5 535 aa16.27■□□□□ 0.19
COPS3-212ENST00000539941 PPT2Q9UMR5 302 aa16.27■□□□□ 0.19
COPS3-212ENST00000539941 SH2B3Q9UQQ2 575 aa16.27■□□□□ 0.19
COPS3-212ENST00000539941 PLXND1Q9Y4D7 1925 aa16.26■□□□□ 0.19
COPS3-212ENST00000539941 PCM1Q15154 2024 aa16.26■□□□□ 0.19
COPS3-212ENST00000539941 A0A1W2PPV9 198 aa16.26■□□□□ 0.19
COPS3-212ENST00000539941 PIPSLA2A3N6 862 aa16.26■□□□□ 0.19
COPS3-212ENST00000539941 METTL12A8MUP2 240 aa16.26■□□□□ 0.19
COPS3-212ENST00000539941 H0Y3Z8 333 aa16.26■□□□□ 0.19
COPS3-212ENST00000539941 STK25O00506 426 aa16.26■□□□□ 0.19
COPS3-212ENST00000539941 THEGLP0DJG4 465 aa16.26■□□□□ 0.19
COPS3-212ENST00000539941 CAPN3P20807 821 aa16.26■□□□□ 0.19
COPS3-212ENST00000539941 CXCR2P25025 360 aa16.26■□□□□ 0.19
COPS3-212ENST00000539941 ACTR1BP42025 376 aa16.26■□□□□ 0.19
COPS3-212ENST00000539941 ZFP36L2P47974 494 aaKnown RBP16.26■□□□□ 0.19
COPS3-212ENST00000539941 MTTPP55157 894 aa16.26■□□□□ 0.19
COPS3-212ENST00000539941 ACTR1AP61163 376 aa16.26■□□□□ 0.19
COPS3-212ENST00000539941 PHEXP78562 749 aa16.26■□□□□ 0.19
COPS3-212ENST00000539941 KRT78Q8N1N4 520 aa16.26■□□□□ 0.19
COPS3-212ENST00000539941 FBXW8Q8N3Y1 598 aa16.26■□□□□ 0.19
COPS3-212ENST00000539941 FAM160A2Q8N612 972 aaPredicted RBP16.26■□□□□ 0.19
COPS3-212ENST00000539941 ABHD11Q8NFV4 315 aa16.26■□□□□ 0.19
COPS3-212ENST00000539941 SNX19Q92543 992 aa16.26■□□□□ 0.19
COPS3-212ENST00000539941 ZBTB18Q99592 522 aa16.26■□□□□ 0.19
COPS3-212ENST00000539941 ACTL8Q9H568 366 aa16.26■□□□□ 0.19
COPS3-212ENST00000539941 TIMMDC1Q9NPL8 285 aa16.26■□□□□ 0.19
COPS3-212ENST00000539941 TAC3Q9UHF0 121 aa16.26■□□□□ 0.19
COPS3-212ENST00000539941 ADGRE2Q9UHX3 823 aa16.26■□□□□ 0.19
COPS3-212ENST00000539941 PNMA8BQ9ULN7 279 aaPredicted RBP16.26■□□□□ 0.19
COPS3-212ENST00000539941 PAIP2BQ9ULR5 123 aaKnown RBP16.26■□□□□ 0.19
COPS3-212ENST00000539941 SIT1Q9Y3P8 196 aa16.26■□□□□ 0.19
COPS3-212ENST00000539941 A6NCN8 305 aa16.25■□□□□ 0.19
COPS3-212ENST00000539941 OR52A4PA6NMU1 304 aa16.25■□□□□ 0.19
COPS3-212ENST00000539941 ATP6V1G1O75348 118 aa16.25■□□□□ 0.19
COPS3-212ENST00000539941 EEDO75530 441 aaKnown RBP16.25■□□□□ 0.19
COPS3-212ENST00000539941 BCKDHAP12694 445 aa16.25■□□□□ 0.19
COPS3-212ENST00000539941 CDH1P12830 882 aa16.25■□□□□ 0.19
COPS3-212ENST00000539941 F3P13726 295 aa16.25■□□□□ 0.19
COPS3-212ENST00000539941 AMD1P17707 334 aa16.25■□□□□ 0.19
COPS3-212ENST00000539941 AK4P27144 223 aaPredicted RBP16.25■□□□□ 0.19
COPS3-212ENST00000539941 PIK3CBP42338 1070 aa16.25■□□□□ 0.19
COPS3-212ENST00000539941 BLKP51451 505 aa16.25■□□□□ 0.19
COPS3-212ENST00000539941 MTAPQ13126 283 aa16.25■□□□□ 0.19
COPS3-212ENST00000539941 VPS26BQ4G0F5 336 aa16.25■□□□□ 0.19
COPS3-212ENST00000539941 USP39Q53GS9 565 aaKnown RBP16.25■□□□□ 0.19
COPS3-212ENST00000539941 PRMT9Q6P2P2 845 aa16.25■□□□□ 0.19
COPS3-212ENST00000539941 IQCHQ86VS3 1027 aa16.25■□□□□ 0.19
COPS3-212ENST00000539941 FAM129CQ86XR2 697 aa16.25■□□□□ 0.19
COPS3-212ENST00000539941 LIX1Q8N485 282 aa16.25■□□□□ 0.19
COPS3-212ENST00000539941 FRMD1Q8N878 549 aa16.25■□□□□ 0.19
COPS3-212ENST00000539941 LINC01555Q8NAE3 123 aa16.25■□□□□ 0.19
COPS3-212ENST00000539941 OR52E1Q8NGJ3 308 aa16.25■□□□□ 0.19
COPS3-212ENST00000539941 HUS1BQ8NHY5 278 aa16.25■□□□□ 0.19
COPS3-212ENST00000539941 GPBAR1Q8TDU6 330 aa16.25■□□□□ 0.19
COPS3-212ENST00000539941 KLHDC7BQ96G42 594 aa16.25■□□□□ 0.19
COPS3-212ENST00000539941 CLPTM1LQ96KA5 538 aa16.25■□□□□ 0.19
COPS3-212ENST00000539941 SPACA7Q96KW9 195 aa16.25■□□□□ 0.19
COPS3-212ENST00000539941 TEX37Q96LM6 180 aa16.25■□□□□ 0.19
COPS3-212ENST00000539941 MTERF1Q99551 399 aaKnown RBP16.25■□□□□ 0.19
COPS3-212ENST00000539941 GSDMCQ9BYG8 508 aa16.25■□□□□ 0.19
COPS3-212ENST00000539941 TBCCD1Q9NVR7 557 aa16.25■□□□□ 0.19
COPS3-212ENST00000539941 GID8Q9NWU2 228 aa16.25■□□□□ 0.19
COPS3-212ENST00000539941 SCHIP1Q9P0W5 487 aaPredicted RBP16.25■□□□□ 0.19
COPS3-212ENST00000539941 LEF1Q9UJU2 399 aaPredicted RBP16.25■□□□□ 0.19
COPS3-212ENST00000539941 CROTQ9UKG9 612 aa16.25■□□□□ 0.19
COPS3-212ENST00000539941 ZNF232Q9UNY5 417 aa16.25■□□□□ 0.19
COPS3-212ENST00000539941 ZNF318Q5VUA4 2279 aa16.25■□□□□ 0.19
COPS3-212ENST00000539941 CCDC154A6NI56 674 aa16.24■□□□□ 0.19
COPS3-212ENST00000539941 ENTPD5O75356 428 aa16.24■□□□□ 0.19
COPS3-212ENST00000539941 PDGFBP01127 241 aaPredicted RBP16.24■□□□□ 0.19
COPS3-212ENST00000539941 PCNAP12004 261 aa16.24■□□□□ 0.19
COPS3-212ENST00000539941 SERPINB1P30740 379 aa16.24■□□□□ 0.19
COPS3-212ENST00000539941 PLA2G5P39877 138 aa16.24■□□□□ 0.19
COPS3-212ENST00000539941 CXCL12P48061 93 aa16.24■□□□□ 0.19
COPS3-212ENST00000539941 CCR8P51685 355 aa16.24■□□□□ 0.19
COPS3-212ENST00000539941 PSME3P61289 254 aa16.24■□□□□ 0.19
COPS3-212ENST00000539941 FOXM1Q08050 763 aa16.24■□□□□ 0.19
COPS3-212ENST00000539941 EIF2B5Q13144 721 aaKnown RBP16.24■□□□□ 0.19
COPS3-212ENST00000539941 FZD2Q14332 565 aa16.24■□□□□ 0.19
COPS3-212ENST00000539941 C8orf82Q6P1X6 216 aaPredicted RBP16.24■□□□□ 0.19
COPS3-212ENST00000539941 SLC36A4Q6YBV0 504 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms