RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 LSM1O15116 133 aaKnown RBP15.52■□□□□ 0.07
TRAF3-204ENST00000539721 NUDT21O43809 227 aaKnown RBP15.52■□□□□ 0.07
TRAF3-204ENST00000539721 HSD3B1P14060 373 aa15.52■□□□□ 0.07
TRAF3-204ENST00000539721 GLB1P16278 677 aa15.52■□□□□ 0.07
TRAF3-204ENST00000539721 HSD3B2P26439 372 aa15.52■□□□□ 0.07
TRAF3-204ENST00000539721 GRIA3P42263 894 aa15.52■□□□□ 0.07
TRAF3-204ENST00000539721 EPHA4P54764 986 aa15.52■□□□□ 0.07
TRAF3-204ENST00000539721 AP5B1Q2VPB7 878 aa15.52■□□□□ 0.07
TRAF3-204ENST00000539721 C6orf136Q5SQH8 315 aa15.52■□□□□ 0.07
TRAF3-204ENST00000539721 TCEAL6Q6IPX3 200 aa15.52■□□□□ 0.07
TRAF3-204ENST00000539721 FNDC5Q8NAU1 212 aa15.52■□□□□ 0.07
TRAF3-204ENST00000539721 TCEAL3Q969E4 200 aa15.52■□□□□ 0.07
TRAF3-204ENST00000539721 BRF2Q9HAW0 419 aa15.52■□□□□ 0.07
TRAF3-204ENST00000539721 PADI4Q9UM07 663 aa15.52■□□□□ 0.07
TRAF3-204ENST00000539721 RALGAPA1Q6GYQ0 2036 aa15.51■□□□□ 0.07
TRAF3-204ENST00000539721 A0A0J9YY10 115 aa15.51■□□□□ 0.07
TRAF3-204ENST00000539721 ANKDD1BA6NHY2 528 aa15.51■□□□□ 0.07
TRAF3-204ENST00000539721 MAGEB17A8MXT2 336 aa15.51■□□□□ 0.07
TRAF3-204ENST00000539721 HAT1O14929 419 aa15.51■□□□□ 0.07
TRAF3-204ENST00000539721 OR1F1O43749 312 aa15.51■□□□□ 0.07
TRAF3-204ENST00000539721 RSL1D1O76021 490 aaKnown RBP15.51■□□□□ 0.07
TRAF3-204ENST00000539721 FKBP9O95302 570 aa15.51■□□□□ 0.07
TRAF3-204ENST00000539721 MYF5P13349 255 aa15.51■□□□□ 0.07
TRAF3-204ENST00000539721 CAPZBP47756 277 aa15.51■□□□□ 0.07
TRAF3-204ENST00000539721 RPS13P62277 151 aaKnown RBP15.51■□□□□ 0.07
TRAF3-204ENST00000539721 ERVK-8P63133 956 aa15.51■□□□□ 0.07
TRAF3-204ENST00000539721 PLA2G2CQ5R387 149 aa15.51■□□□□ 0.07
TRAF3-204ENST00000539721 ZNF425Q6IV72 752 aa15.51■□□□□ 0.07
TRAF3-204ENST00000539721 OGFOD2Q6N063 350 aa15.51■□□□□ 0.07
TRAF3-204ENST00000539721 CHSY3Q70JA7 882 aa15.51■□□□□ 0.07
TRAF3-204ENST00000539721 SPATA19Q7Z5L4 167 aa15.51■□□□□ 0.07
TRAF3-204ENST00000539721 PLD3Q8IV08 490 aa15.51■□□□□ 0.07
TRAF3-204ENST00000539721 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.51■□□□□ 0.072e-6■■■■■ 81.2
TRAF3-204ENST00000539721 MINDY1Q8N5J2 469 aa15.51■□□□□ 0.07
TRAF3-204ENST00000539721 TBC1D19Q8N5T2 526 aa15.51■□□□□ 0.07
TRAF3-204ENST00000539721 LRFN3Q9BTN0 628 aa15.51■□□□□ 0.07
TRAF3-204ENST00000539721 LRTM1Q9HBL6 345 aa15.51■□□□□ 0.07
TRAF3-204ENST00000539721 POMT2Q9UKY4 750 aa15.51■□□□□ 0.07
TRAF3-204ENST00000539721 SLC12A4Q9UP95 1085 aa15.51■□□□□ 0.07
TRAF3-204ENST00000539721 TSC22D4Q9Y3Q8 395 aa15.51■□□□□ 0.07
TRAF3-204ENST00000539721 TRBC2A0A5B9 178 aa15.5■□□□□ 0.07
TRAF3-204ENST00000539721 FOXE1O00358 373 aaPredicted RBP15.5■□□□□ 0.07
TRAF3-204ENST00000539721 ZW10O43264 779 aa15.5■□□□□ 0.07
TRAF3-204ENST00000539721 SIGLEC6O43699 453 aa15.5■□□□□ 0.07
TRAF3-204ENST00000539721 NRP2O60462 931 aa15.5■□□□□ 0.07
TRAF3-204ENST00000539721 SEC22BO75396 215 aa15.5■□□□□ 0.07
TRAF3-204ENST00000539721 ALDOCP09972 364 aaKnown RBP15.5■□□□□ 0.07
TRAF3-204ENST00000539721 MAGP20916 626 aa15.5■□□□□ 0.07
TRAF3-204ENST00000539721 ALDH4A1P30038 563 aa15.5■□□□□ 0.07
TRAF3-204ENST00000539721 PIK3CBP42338 1070 aa15.5■□□□□ 0.07
TRAF3-204ENST00000539721 PPP1CAP62136 330 aa15.5■□□□□ 0.07
TRAF3-204ENST00000539721 RPL38P63173 70 aaKnown RBP15.5■□□□□ 0.07
TRAF3-204ENST00000539721 NAA25Q14CX7 972 aa15.5■□□□□ 0.07
TRAF3-204ENST00000539721 NR0B2Q15466 257 aa15.5■□□□□ 0.07
TRAF3-204ENST00000539721 ZNF438Q7Z4V0 828 aa15.5■□□□□ 0.07
TRAF3-204ENST00000539721 PAQR7Q86WK9 346 aa15.5■□□□□ 0.07
TRAF3-204ENST00000539721 EID2Q8N6I1 236 aa15.5■□□□□ 0.07
TRAF3-204ENST00000539721 APOLD1Q96LR9 279 aa15.5■□□□□ 0.07
TRAF3-204ENST00000539721 C1orf50Q9BV19 199 aa15.5■□□□□ 0.07
TRAF3-204ENST00000539721 RHBGQ9H310 441 aa15.5■□□□□ 0.07
TRAF3-204ENST00000539721 DMRT3Q9NQL9 472 aa15.5■□□□□ 0.07
TRAF3-204ENST00000539721 C1orf109Q9NX04 203 aa15.5■□□□□ 0.07
TRAF3-204ENST00000539721 ANKMY1Q9P2S6 941 aa15.5■□□□□ 0.07
TRAF3-204ENST00000539721 ADGRE2Q9UHX3 823 aa15.5■□□□□ 0.07
TRAF3-204ENST00000539721 COPG1Q9Y678 874 aaKnown RBP15.5■□□□□ 0.07
TRAF3-204ENST00000539721 ARID1BQ8NFD5 2236 aaPredicted RBP15.5■□□□□ 0.07
TRAF3-204ENST00000539721 PCDHGA12O60330 932 aa15.49■□□□□ 0.07
TRAF3-204ENST00000539721 SH3BGRLO75368 114 aa15.49■□□□□ 0.07
TRAF3-204ENST00000539721 UBOX5O94941 541 aa15.49■□□□□ 0.07
TRAF3-204ENST00000539721 PRPH2P23942 346 aa15.49■□□□□ 0.07
TRAF3-204ENST00000539721 SERPINB1P30740 379 aa15.49■□□□□ 0.07
TRAF3-204ENST00000539721 SCTRP47872 440 aa15.49■□□□□ 0.07
TRAF3-204ENST00000539721 OR1D5P58170 312 aa15.49■□□□□ 0.07
TRAF3-204ENST00000539721 STX1BP61266 288 aa15.49■□□□□ 0.07
TRAF3-204ENST00000539721 CYP4F2P78329 520 aa15.49■□□□□ 0.07
TRAF3-204ENST00000539721 IRGCQ6NXR0 463 aa15.49■□□□□ 0.07
TRAF3-204ENST00000539721 FIGLAQ6QHK4 219 aa15.49■□□□□ 0.07
TRAF3-204ENST00000539721 CCDC121Q6ZUS5 278 aa15.49■□□□□ 0.07
TRAF3-204ENST00000539721 ZFAND4Q86XD8 727 aa15.49■□□□□ 0.07
TRAF3-204ENST00000539721 CPSF7Q8N684 471 aaKnown RBP15.49■□□□□ 0.07
TRAF3-204ENST00000539721 ANKRD53Q8N9V6 530 aa15.49■□□□□ 0.07
TRAF3-204ENST00000539721 CMTM7Q96FZ5 175 aa15.49■□□□□ 0.07
TRAF3-204ENST00000539721 AHCYL2Q96HN2 611 aaKnown RBP15.49■□□□□ 0.07
TRAF3-204ENST00000539721 PPM1MQ96MI6 270 aa15.49■□□□□ 0.07
TRAF3-204ENST00000539721 PRRX2Q99811 253 aa15.49■□□□□ 0.07
TRAF3-204ENST00000539721 CCDC106Q9BWC9 280 aa15.49■□□□□ 0.07
TRAF3-204ENST00000539721 ABCG4Q9H172 646 aa15.49■□□□□ 0.07
TRAF3-204ENST00000539721 ZNF385DQ9H6B1 395 aa15.49■□□□□ 0.07
TRAF3-204ENST00000539721 VPS29Q9UBQ0 182 aa15.49■□□□□ 0.07
TRAF3-204ENST00000539721 TNFSF14O43557 240 aa15.49■□□□□ 0.07
TRAF3-204ENST00000539721 LCMT2O60294 686 aaKnown RBP15.49■□□□□ 0.07
TRAF3-204ENST00000539721 RETP07949 1114 aa15.49■□□□□ 0.07
TRAF3-204ENST00000539721 CDH3P22223 829 aa15.49■□□□□ 0.07
TRAF3-204ENST00000539721 BCL6P41182 706 aa15.49■□□□□ 0.07
TRAF3-204ENST00000539721 GPR3P46089 330 aa15.49■□□□□ 0.07
TRAF3-204ENST00000539721 LSSP48449 732 aa15.49■□□□□ 0.07
TRAF3-204ENST00000539721 EMX2Q04743 252 aa15.49■□□□□ 0.07
TRAF3-204ENST00000539721 MAD2L1Q13257 205 aaPredicted RBP15.49■□□□□ 0.07
TRAF3-204ENST00000539721 SQLEQ14534 574 aa15.49■□□□□ 0.07
TRAF3-204ENST00000539721 SMU1Q2TAY7 513 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms