RNA–Protein interactions for RNA: ENST00000539241.1

CCND1-204, Transcript of cyclin D1, humanhuman

TSL 2

Gene CCND1, Length 920 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-204ENST00000539241 ZFATQ9P243 1243 aa13.35□□□□□ -0.27
CCND1-204ENST00000539241 NOVA2Q9UNW9 492 aaKnown RBP13.35□□□□□ -0.27
CCND1-204ENST00000539241 SLC5A6Q9Y289 635 aa13.35□□□□□ -0.27
CCND1-204ENST00000539241 NTNG1Q9Y2I2 539 aa13.35□□□□□ -0.27
CCND1-204ENST00000539241 LOC105369274A0A096LPK9 316 aa13.34□□□□□ -0.27
CCND1-204ENST00000539241 LOC102723532A0A0G2JNH3 316 aa13.34□□□□□ -0.27
CCND1-204ENST00000539241 OR2A25A4D2G3 310 aa13.34□□□□□ -0.27
CCND1-204ENST00000539241 WIPF3A6NGB9 483 aa13.34□□□□□ -0.27
CCND1-204ENST00000539241 NIPSNAP2O75323 286 aa13.34□□□□□ -0.27
CCND1-204ENST00000539241 ESR1P03372 595 aa13.34□□□□□ -0.27
CCND1-204ENST00000539241 EIF2S1P05198 315 aaKnown RBP13.34□□□□□ -0.27
CCND1-204ENST00000539241 TUBBP07437 444 aa13.34□□□□□ -0.27
CCND1-204ENST00000539241 FAM153BP0C7A2 387 aa13.34□□□□□ -0.27
CCND1-204ENST00000539241 ATP5DP30049 168 aa13.34□□□□□ -0.27
CCND1-204ENST00000539241 CMPK1P30085 196 aa13.34□□□□□ -0.27
CCND1-204ENST00000539241 PHBP35232 272 aa13.34□□□□□ -0.27
CCND1-204ENST00000539241 VSNL1P62760 191 aa13.34□□□□□ -0.27
CCND1-204ENST00000539241 MPP1Q00013 466 aa13.34□□□□□ -0.27
CCND1-204ENST00000539241 OCA2Q04671 838 aa13.34□□□□□ -0.27
CCND1-204ENST00000539241 KLC1Q07866 573 aa13.34□□□□□ -0.27
CCND1-204ENST00000539241 GBX1Q14549 363 aa13.34□□□□□ -0.27
CCND1-204ENST00000539241 NAA25Q14CX7 972 aa13.34□□□□□ -0.27
CCND1-204ENST00000539241 MUM1Q2TAK8 710 aa13.34□□□□□ -0.27
CCND1-204ENST00000539241 FAM153CQ494X1 144 aa13.34□□□□□ -0.27
CCND1-204ENST00000539241 PRMT9Q6P2P2 845 aa13.34□□□□□ -0.27
CCND1-204ENST00000539241 TRMT10CQ7L0Y3 403 aaKnown RBP13.34□□□□□ -0.27
CCND1-204ENST00000539241 MAMDC2Q7Z304 686 aaPredicted RBP13.34□□□□□ -0.27
CCND1-204ENST00000539241 PRSS58Q8IYP2 241 aa13.34□□□□□ -0.27
CCND1-204ENST00000539241 OR4N4Q8N0Y3 316 aa13.34□□□□□ -0.27
CCND1-204ENST00000539241 OR9A1PQ8NGU1 263 aa13.34□□□□□ -0.27
CCND1-204ENST00000539241 DNAJB14Q8TBM8 379 aa13.34□□□□□ -0.27
CCND1-204ENST00000539241 STT3BQ8TCJ2 826 aa13.34□□□□□ -0.27
CCND1-204ENST00000539241 FAM136AQ96C01 138 aa13.34□□□□□ -0.27
CCND1-204ENST00000539241 MIEF2Q96C03 454 aa13.34□□□□□ -0.27
CCND1-204ENST00000539241 CNDP1Q96KN2 507 aa13.34□□□□□ -0.27
CCND1-204ENST00000539241 C10orf90Q96M02 699 aa13.34□□□□□ -0.27
CCND1-204ENST00000539241 C5orf34Q96MH7 638 aa13.34□□□□□ -0.27
CCND1-204ENST00000539241 ZFYVE21Q9BQ24 234 aa13.34□□□□□ -0.27
CCND1-204ENST00000539241 ACAT2Q9BWD1 397 aa13.34□□□□□ -0.27
CCND1-204ENST00000539241 TXLNGYQ9BZA5 131 aa13.34□□□□□ -0.27
CCND1-204ENST00000539241 EPS8L2Q9H6S3 715 aa13.34□□□□□ -0.27
CCND1-204ENST00000539241 FBXO6Q9NRD1 293 aaPredicted RBP13.34□□□□□ -0.27
CCND1-204ENST00000539241 NSMCE4AQ9NXX6 385 aa13.34□□□□□ -0.27
CCND1-204ENST00000539241 STOX2Q9P2F5 926 aaPredicted RBP13.34□□□□□ -0.27
CCND1-204ENST00000539241 FAM159BA6NKW6 160 aa13.33□□□□□ -0.28
CCND1-204ENST00000539241 ARHGEF33A8MVX0 844 aa13.33□□□□□ -0.28
CCND1-204ENST00000539241 MATN4O95460 622 aa13.33□□□□□ -0.28
CCND1-204ENST00000539241 ACSL3O95573 720 aa13.33□□□□□ -0.28
CCND1-204ENST00000539241 CLDN1O95832 211 aa13.33□□□□□ -0.28
CCND1-204ENST00000539241 C1QAP02745 245 aa13.33□□□□□ -0.28
CCND1-204ENST00000539241 ZGLP1P0C6A0 271 aa13.33□□□□□ -0.28
CCND1-204ENST00000539241 ERGP11308 486 aa13.33□□□□□ -0.28
CCND1-204ENST00000539241 CHRM3P20309 590 aa13.33□□□□□ -0.28
CCND1-204ENST00000539241 YBX1P67809 324 aaKnown RBP13.33□□□□□ -0.28
CCND1-204ENST00000539241 NAB1Q13506 487 aa13.33□□□□□ -0.28
CCND1-204ENST00000539241 PRTGQ2VWP7 1150 aa13.33□□□□□ -0.28
CCND1-204ENST00000539241 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.33□□□□□ -0.28
CCND1-204ENST00000539241 FBXO42Q6P3S6 717 aa13.33□□□□□ -0.28
CCND1-204ENST00000539241 SLC26A11Q86WA9 606 aa13.33□□□□□ -0.28
CCND1-204ENST00000539241 ST6GALNAC3Q8NDV1 305 aa13.33□□□□□ -0.28
CCND1-204ENST00000539241 FBF1Q8TES7 1133 aa13.33□□□□□ -0.28
CCND1-204ENST00000539241 THOC3Q96J01 351 aaKnown RBP13.33□□□□□ -0.28
CCND1-204ENST00000539241 MESP1Q9BRJ9 268 aa13.33□□□□□ -0.28
CCND1-204ENST00000539241 DPH7Q9BTV6 452 aa13.33□□□□□ -0.28
CCND1-204ENST00000539241 FUT8Q9BYC5 575 aa13.33□□□□□ -0.28
CCND1-204ENST00000539241 MRPS30Q9NP92 439 aaKnown RBP13.33□□□□□ -0.28
CCND1-204ENST00000539241 SLC17A6Q9P2U8 582 aa13.33□□□□□ -0.28
CCND1-204ENST00000539241 ZNF282Q9UDV7 671 aaPredicted RBP13.33□□□□□ -0.28
CCND1-204ENST00000539241 C3orf18Q9UK00 162 aa13.33□□□□□ -0.28
CCND1-204ENST00000539241 CRYL1Q9Y2S2 319 aa13.33□□□□□ -0.28
CCND1-204ENST00000539241 COMMD10Q9Y6G5 202 aa13.33□□□□□ -0.28
CCND1-204ENST00000539241 ANKRD12Q6UB98 2062 aa13.33□□□□□ -0.28
CCND1-204ENST00000539241 CCDC88CQ9P219 2028 aa13.32□□□□□ -0.28
CCND1-204ENST00000539241 POLEQ07864 2286 aa13.32□□□□□ -0.28
CCND1-204ENST00000539241 H0YGG7 62 aa13.32□□□□□ -0.28
CCND1-204ENST00000539241 MAP2K7O14733 419 aa13.32□□□□□ -0.28
CCND1-204ENST00000539241 VPS26AO75436 327 aa13.32□□□□□ -0.28
CCND1-204ENST00000539241 HPP00738 406 aa13.32□□□□□ -0.28
CCND1-204ENST00000539241 ABHD2P08910 425 aa13.32□□□□□ -0.28
CCND1-204ENST00000539241 PKMP14618 531 aaKnown RBP13.32□□□□□ -0.28
CCND1-204ENST00000539241 ACPPP15309 386 aa13.32□□□□□ -0.28
CCND1-204ENST00000539241 FBLP22087 321 aaKnown RBP13.32□□□□□ -0.28
CCND1-204ENST00000539241 GABRB3P28472 473 aa13.32□□□□□ -0.28
CCND1-204ENST00000539241 RPA3P35244 121 aaPredicted RBP13.32□□□□□ -0.28
CCND1-204ENST00000539241 TSFMP43897 325 aaKnown RBP13.32□□□□□ -0.28
CCND1-204ENST00000539241 ARF3P61204 181 aaPredicted RBP13.32□□□□□ -0.28
CCND1-204ENST00000539241 Q0VFX4 171 aa13.32□□□□□ -0.28
CCND1-204ENST00000539241 ILF2Q12905 390 aaKnown RBP13.32□□□□□ -0.28
CCND1-204ENST00000539241 ZNF169Q14929 603 aaPredicted RBP13.32□□□□□ -0.28
CCND1-204ENST00000539241 ACSBG2Q5FVE4 666 aa13.32□□□□□ -0.28
CCND1-204ENST00000539241 SUSD1Q6UWL2 747 aa13.32□□□□□ -0.28
CCND1-204ENST00000539241 SMPDL3AQ92484 453 aa13.32□□□□□ -0.28
CCND1-204ENST00000539241 C8orf44Q96CB5 159 aa13.32□□□□□ -0.28
CCND1-204ENST00000539241 CABS1Q96KC9 395 aa13.32□□□□□ -0.28
CCND1-204ENST00000539241 PLCD4Q9BRC7 762 aa13.32□□□□□ -0.28
CCND1-204ENST00000539241 PARD6BQ9BYG5 372 aa13.32□□□□□ -0.28
CCND1-204ENST00000539241 CCDC68Q9H2F9 335 aa13.32□□□□□ -0.28
CCND1-204ENST00000539241 ACSS3Q9H6R3 686 aa13.32□□□□□ -0.28
CCND1-204ENST00000539241 ZNF160Q9HCG1 818 aa13.32□□□□□ -0.28
CCND1-204ENST00000539241 SMYD2Q9NRG4 433 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms