RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 KIAA1191Q96A73 305 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 C18orf25Q96B23 403 aaPredicted RBP6.5□□□□□ -1.37
USP28-207ENST00000538475 SH3KBP1Q96B97 665 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 REPS1Q96D71 796 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 ERLEC1Q96DZ1 483 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 SPATA17Q96L03 361 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 PPP3R2Q96LZ3 170 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 GPR137Q96N19 417 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 SLC2A13Q96QE2 648 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 DCLRE1CQ96SD1 692 aaKnown RBP6.5□□□□□ -1.37
USP28-207ENST00000538475 EPYCQ99645 322 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 TTYH2Q9BSA4 534 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 MRPL9Q9BYD2 267 aaKnown RBP6.5□□□□□ -1.37
USP28-207ENST00000538475 DERL2Q9GZP9 239 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 SRRQ9GZT4 340 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 RAB6CQ9H0N0 254 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 MIR1-1HGQ9H1L0 117 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 SLC6A15Q9H2J7 730 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 SPNS1Q9H2V7 528 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 FOLH1BQ9HBA9 442 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 ZNF304Q9HCX3 659 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 RANGRFQ9HD47 186 aaPredicted RBP6.5□□□□□ -1.37
USP28-207ENST00000538475 TNFRSF12AQ9NP84 129 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 TIGARQ9NQ88 270 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 ZC4H2Q9NQZ6 224 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 SLC39A1Q9NY26 324 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 ATP6V1HQ9UI12 483 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 ING4Q9UNL4 249 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 SLC5A6Q9Y289 635 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 FIS1Q9Y3D6 152 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 PKP3Q9Y446 797 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 MFHAS1Q9Y4C4 1052 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 IPPQ9Y573 584 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 PCDHGB7Q9Y5F8 929 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 PATJQ8NI35 1801 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 A0A0X1KG70 313 aa6.49□□□□□ -1.37
USP28-207ENST00000538475 ORC5O43913 435 aa6.49□□□□□ -1.37
USP28-207ENST00000538475 NOBOXO60393 691 aa6.49□□□□□ -1.37
USP28-207ENST00000538475 WBP4O75554 376 aaKnown RBP6.49□□□□□ -1.37
USP28-207ENST00000538475 ATP6AP2O75787 350 aa6.49□□□□□ -1.37
USP28-207ENST00000538475 GRAP2O75791 330 aa6.49□□□□□ -1.37
USP28-207ENST00000538475 IL1AP01583 271 aa6.49□□□□□ -1.37
USP28-207ENST00000538475 EDN1P05305 212 aa6.49□□□□□ -1.37
USP28-207ENST00000538475 ADORA3P0DMS8 318 aa6.49□□□□□ -1.37
USP28-207ENST00000538475 CYP2A6P11509 494 aaPredicted RBP6.49□□□□□ -1.37
USP28-207ENST00000538475 TAL1P17542 331 aaPredicted RBP6.49□□□□□ -1.37
USP28-207ENST00000538475 PRKACAP17612 351 aa6.49□□□□□ -1.37
USP28-207ENST00000538475 OGNP20774 298 aaKnown RBP6.49□□□□□ -1.37
USP28-207ENST00000538475 BDNFP23560 247 aa6.49□□□□□ -1.37
USP28-207ENST00000538475 ALDH4A1P30038 563 aa6.49□□□□□ -1.37
USP28-207ENST00000538475 CHRNA5P30532 468 aa6.49□□□□□ -1.37
USP28-207ENST00000538475 FMO3P31513 532 aa6.49□□□□□ -1.37
USP28-207ENST00000538475 GGT2P36268 569 aa6.49□□□□□ -1.37
USP28-207ENST00000538475 CBX5P45973 191 aa6.49□□□□□ -1.37
USP28-207ENST00000538475 SULT1E1P49888 294 aa6.49□□□□□ -1.37
USP28-207ENST00000538475 AP1S2P56377 157 aa6.49□□□□□ -1.37
USP28-207ENST00000538475 TPI1P60174 286 aa6.49□□□□□ -1.37
USP28-207ENST00000538475 JAG1P78504 1218 aa6.49□□□□□ -1.37
USP28-207ENST00000538475 RHAGQ02094 409 aa6.49□□□□□ -1.37
USP28-207ENST00000538475 RING1Q06587 406 aa6.49□□□□□ -1.37
USP28-207ENST00000538475 PIGFQ07326 219 aa6.49□□□□□ -1.37
USP28-207ENST00000538475 LAMTOR4Q0VGL1 99 aa6.49□□□□□ -1.37
USP28-207ENST00000538475 NPRL3Q12980 569 aa6.49□□□□□ -1.37
USP28-207ENST00000538475 CTBP1Q13363 440 aa6.49□□□□□ -1.37
USP28-207ENST00000538475 PON2Q15165 354 aa6.49□□□□□ -1.37
USP28-207ENST00000538475 GPR19Q15760 415 aa6.49□□□□□ -1.37
USP28-207ENST00000538475 GRK1Q15835 563 aa6.49□□□□□ -1.37
USP28-207ENST00000538475 FUT11Q495W5 492 aa6.49□□□□□ -1.37
USP28-207ENST00000538475 GLYR1Q49A26 553 aaPredicted RBP6.49□□□□□ -1.37
USP28-207ENST00000538475 SEZ6Q53EL9 994 aa6.49□□□□□ -1.37
USP28-207ENST00000538475 RUNDC3AQ59EK9 446 aa6.49□□□□□ -1.37
USP28-207ENST00000538475 Q5BKY6 102 aa6.49□□□□□ -1.37
USP28-207ENST00000538475 C6orf136Q5SQH8 315 aa6.49□□□□□ -1.37
USP28-207ENST00000538475 DACT2Q5SW24 774 aa6.49□□□□□ -1.37
USP28-207ENST00000538475 LRIF1Q5T3J3 769 aa6.49□□□□□ -1.37
USP28-207ENST00000538475 C10orf62Q5T681 223 aaPredicted RBP6.49□□□□□ -1.37
USP28-207ENST00000538475 LCN1P1Q5VSP4 162 aa6.49□□□□□ -1.37
USP28-207ENST00000538475 PLET1Q6UQ28 207 aa6.49□□□□□ -1.37
USP28-207ENST00000538475 RANBP10Q6VN20 620 aa6.49□□□□□ -1.37
USP28-207ENST00000538475 CATSPERGQ6ZRH7 1159 aa6.49□□□□□ -1.37
USP28-207ENST00000538475 ARHGAP36Q6ZRI8 547 aa6.49□□□□□ -1.37
USP28-207ENST00000538475 FAM92BQ6ZTR7 304 aa6.49□□□□□ -1.37
USP28-207ENST00000538475 PRSS42Q7Z5A4 293 aa6.49□□□□□ -1.37
USP28-207ENST00000538475 LUZP2Q86TE4 346 aa6.49□□□□□ -1.37
USP28-207ENST00000538475 FAM83AQ86UY5 434 aa6.49□□□□□ -1.37
USP28-207ENST00000538475 RASAL3Q86YV0 1011 aa6.49□□□□□ -1.37
USP28-207ENST00000538475 YIPF7Q8N8F6 280 aa6.49□□□□□ -1.37
USP28-207ENST00000538475 PTGR2Q8N8N7 351 aaPredicted RBP6.49□□□□□ -1.37
USP28-207ENST00000538475 AGBL5Q8NDL9 886 aa6.49□□□□□ -1.37
USP28-207ENST00000538475 OR5T2Q8NGG2 359 aa6.49□□□□□ -1.37
USP28-207ENST00000538475 ZNF675Q8TD23 568 aa6.49□□□□□ -1.37
USP28-207ENST00000538475 FRS2Q8WU20 508 aa6.49□□□□□ -1.37
USP28-207ENST00000538475 AP3S1Q92572 193 aa6.49□□□□□ -1.37
USP28-207ENST00000538475 GAL3ST3Q96A11 431 aa6.49□□□□□ -1.37
USP28-207ENST00000538475 PHF21BQ96EK2 531 aa6.49□□□□□ -1.37
USP28-207ENST00000538475 TOE1Q96GM8 510 aaKnown RBP6.49□□□□□ -1.37
USP28-207ENST00000538475 PIWIL1Q96J94 861 aaKnown RBP6.49□□□□□ -1.37
USP28-207ENST00000538475 MSLNLQ96KJ4 702 aa6.49□□□□□ -1.37
USP28-207ENST00000538475 TMEM74Q96NL1 305 aa6.49□□□□□ -1.37
USP28-207ENST00000538475 ATOH8Q96SQ7 321 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms