RNA–Protein interactions for RNA: ENST00000537296.5

LDHA-215, Transcript of lactate dehydrogenase A, human

TSL 2

Gene LDHA, Length 1,511 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-215	ENST00000537296	ZKSCAN8	Q15776	578 aa	Predicted RBP	10.34	□□□□□ -0.75
LDHA-215	ENST00000537296	TUSC1	Q2TAM9	212 aa		10.34	□□□□□ -0.75
LDHA-215	ENST00000537296	PRTG	Q2VWP7	1150 aa		10.34	□□□□□ -0.75
LDHA-215	ENST00000537296	FBXO48	Q5FWF7	155 aa		10.34	□□□□□ -0.75
LDHA-215	ENST00000537296	TCTE1	Q5JU00	501 aa		10.34	□□□□□ -0.75
LDHA-215	ENST00000537296	MRPL14	Q6P1L8	145 aa	Known RBP	10.34	□□□□□ -0.75
LDHA-215	ENST00000537296	SHISA6	Q6ZSJ9	500 aa		10.34	□□□□□ -0.75
LDHA-215	ENST00000537296	ARHGEF39	Q8N4T4	335 aa		10.34	□□□□□ -0.75
LDHA-215	ENST00000537296	NKAP	Q8N5F7	415 aa	Known RBP	10.34	□□□□□ -0.75
LDHA-215	ENST00000537296	OR56A3	Q8NH54	315 aa		10.34	□□□□□ -0.75
LDHA-215	ENST00000537296	APOBEC4	Q8WW27	367 aa	Known RBP	10.34	□□□□□ -0.75
LDHA-215	ENST00000537296	FBXL8	Q96CD0	374 aa		10.34	□□□□□ -0.75
LDHA-215	ENST00000537296	HIST1H2AH	Q96KK5	128 aa		10.34	□□□□□ -0.75
LDHA-215	ENST00000537296	HIST1H2AJ	Q99878	128 aa		10.34	□□□□□ -0.75
LDHA-215	ENST00000537296	DPH2	Q9BQC3	489 aa	Predicted RBP	10.34	□□□□□ -0.75
LDHA-215	ENST00000537296	MESP1	Q9BRJ9	268 aa		10.34	□□□□□ -0.75
LDHA-215	ENST00000537296	H2AFJ	Q9BTM1	129 aa		10.34	□□□□□ -0.75
LDHA-215	ENST00000537296	SPNS1	Q9H2V7	528 aa		10.34	□□□□□ -0.75
LDHA-215	ENST00000537296	POPDC3	Q9HBV1	291 aa		10.34	□□□□□ -0.75
LDHA-215	ENST00000537296	IFT80	Q9P2H3	777 aa	Predicted RBP	10.34	□□□□□ -0.75
LDHA-215	ENST00000537296	TXNDC16	Q9P2K2	825 aa		10.34	□□□□□ -0.75
LDHA-215	ENST00000537296	ANKMY1	Q9P2S6	941 aa		10.34	□□□□□ -0.75
LDHA-215	ENST00000537296	CTSF	Q9UBX1	484 aa		10.34	□□□□□ -0.75
LDHA-215	ENST00000537296	ZNF462	Q96JM2	2506 aa		10.34	□□□□□ -0.75
LDHA-215	ENST00000537296	ARGFX	A6NJG6	315 aa		10.33	□□□□□ -0.76
LDHA-215	ENST00000537296		C9J4A7	227 aa		10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	LCMT2	O60294	686 aa	Known RBP	10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	CCNDBP1	O95273	360 aa		10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	UMOD	P07911	640 aa		10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	CCDC166	P0CW27	439 aa		10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	EZR	P15311	586 aa	Known RBP	10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	STX2	P32856	288 aa		10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	BCL6	P41182	706 aa		10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	ARSF	P54793	590 aa		10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	SLC12A2	P55011	1212 aa		10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	AP1S2	P56377	157 aa		10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	DLG1	Q12959	904 aa		10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	NFATC3	Q12968	1075 aa		10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	SLMAP	Q14BN4	828 aa		10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	OR4D1	Q15615	310 aa		10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	COLEC12	Q5KU26	742 aa		10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	CATSPERE	Q5SY80	951 aa		10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	VN1R4	Q7Z5H5	301 aa		10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	CSNK1A1L	Q8N752	337 aa		10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	TTC29	Q8NA56	475 aa	Predicted RBP	10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	ZNF740	Q8NDX6	193 aa		10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	PTER	Q96BW5	349 aa		10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	ABHD17A	Q96GS6	310 aa		10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	TSNARE1	Q96NA8	513 aa		10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	CDC42EP4	Q9H3Q1	356 aa	Known RBP	10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	ZNF71	Q9NQZ8	489 aa	Predicted RBP	10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	GEMIN8	Q9NWZ8	242 aa	Known RBP	10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	CTNNAL1	Q9UBT7	734 aa		10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	POLH	Q9Y253	713 aa		10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	MAN2B2	Q9Y2E5	1009 aa		10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	PTRH2	Q9Y3E5	179 aa	Known RBP	10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	NCF1B	A6NI72	391 aa	Predicted RBP	10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	NCF1C	A8MVU1	366 aa	Predicted RBP	10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	ACSL3	O95573	720 aa		10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	RECK	O95980	971 aa		10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	PDGFA	P04085	211 aa		10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	ENO2	P09104	434 aa	Predicted RBP	10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	RHOXF2B	P0C7M4	288 aa		10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	SLC35E2B	P0CK96	405 aa		10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	NCF1	P14598	390 aa	Predicted RBP	10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	CD1D	P15813	335 aa		10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	H2AFX	P16104	143 aa	Predicted RBP	10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	STMN1	P16949	149 aa		10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	OTX2	P32243	289 aa		10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	GDF5	P43026	501 aa		10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	KCNC1	P48547	511 aa		10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	RAB10	P61026	200 aa		10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	ATP1A4	Q13733	1029 aa		10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	GRTP1	Q5TC63	336 aa		10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	CAPN13	Q6MZZ7	669 aa	Predicted RBP	10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	LCTL	Q6UWM7	567 aa		10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	PRSS41	Q7RTY9	318 aa		10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	C17orf64	Q86WR6	236 aa		10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	UHMK1	Q8TAS1	419 aa	Known RBP	10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	NEIL2	Q969S2	332 aa		10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	ESAM	Q96AP7	390 aa		10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	CABS1	Q96KC9	395 aa		10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	FMO2	Q99518	471 aa		10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	RHOXF2	Q9BQY4	288 aa		10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	TRIM54	Q9BYV2	358 aa		10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	DERL2	Q9GZP9	239 aa		10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	TMEM184C	Q9NVA4	438 aa		10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	GPN3	Q9UHW5	284 aa	Predicted RBP	10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	NFU1	Q9UMS0	254 aa		10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	NOVA2	Q9UNW9	492 aa	Known RBP	10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	OARD1	Q9Y530	152 aa		10.33	□□□□□ -0.76
LDHA-215	ENST00000537296	SCN2A	Q99250	2005 aa		10.32	□□□□□ -0.76
LDHA-215	ENST00000537296	FASN	P49327	2511 aa	Known RBP	10.32	□□□□□ -0.76
LDHA-215	ENST00000537296	ATP8B1	O43520	1251 aa		10.32	□□□□□ -0.76
LDHA-215	ENST00000537296	FOXS1	O43638	330 aa		10.32	□□□□□ -0.76
LDHA-215	ENST00000537296	ONECUT2	O95948	504 aa		10.32	□□□□□ -0.76
LDHA-215	ENST00000537296	SPR	P35270	261 aa	Predicted RBP	10.32	□□□□□ -0.76
LDHA-215	ENST00000537296	FOLR3	P41439	243 aa		10.32	□□□□□ -0.76
LDHA-215	ENST00000537296	PMS2	P54278	862 aa		10.32	□□□□□ -0.76
LDHA-215	ENST00000537296	IRF9	Q00978	393 aa		10.32	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms