RNA–Protein interactions for RNA: ENST00000536445.5

POLE-209, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 3

Gene POLE, Length 2,334 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-209	ENST00000536445	SNX6	Q9UNH7	406 aa		13.61	□□□□□ -0.23
POLE-209	ENST00000536445	INVS	Q9Y283	1065 aa		13.61	□□□□□ -0.23
POLE-209	ENST00000536445	BPTF	Q12830	3046 aa		13.6	□□□□□ -0.23
POLE-209	ENST00000536445	LRRC14B	A6NHZ5	514 aa		13.6	□□□□□ -0.23
POLE-209	ENST00000536445	FADS2P1	A8MWK0	482 aa		13.6	□□□□□ -0.23
POLE-209	ENST00000536445	CXCR6	O00574	342 aa		13.6	□□□□□ -0.23
POLE-209	ENST00000536445	SSX4	O60224	188 aa		13.6	□□□□□ -0.23
POLE-209	ENST00000536445	RECQL5	O94762	991 aa	Predicted RBP	13.6	□□□□□ -0.23
POLE-209	ENST00000536445	MLYCD	O95822	493 aa		13.6	□□□□□ -0.23
POLE-209	ENST00000536445	S1PR4	O95977	384 aa		13.6	□□□□□ -0.23
POLE-209	ENST00000536445	IL7	P13232	177 aa		13.6	□□□□□ -0.23
POLE-209	ENST00000536445	PFKL	P17858	780 aa		13.6	□□□□□ -0.23
POLE-209	ENST00000536445	GADD45A	P24522	165 aa		13.6	□□□□□ -0.23
POLE-209	ENST00000536445	KRT20	P35900	424 aa		13.6	□□□□□ -0.23
POLE-209	ENST00000536445	HNF4A	P41235	474 aa		13.6	□□□□□ -0.23
POLE-209	ENST00000536445	CHRNA4	P43681	627 aa		13.6	□□□□□ -0.23
POLE-209	ENST00000536445	GPLD1	P80108	840 aa		13.6	□□□□□ -0.23
POLE-209	ENST00000536445	ITK	Q08881	620 aa		13.6	□□□□□ -0.23
POLE-209	ENST00000536445	TARDBP	Q13148	414 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
POLE-209	ENST00000536445	OR4D1	Q15615	310 aa		13.6	□□□□□ -0.23
POLE-209	ENST00000536445	PARP15	Q460N3	678 aa		13.6	□□□□□ -0.23
POLE-209	ENST00000536445	FBXO43	Q4G163	708 aa		13.6	□□□□□ -0.23
POLE-209	ENST00000536445	C6orf136	Q5SQH8	315 aa		13.6	□□□□□ -0.23
POLE-209	ENST00000536445	LAIR1	Q6GTX8	287 aa		13.6	□□□□□ -0.23
POLE-209	ENST00000536445	DET1	Q7L5Y6	550 aa		13.6	□□□□□ -0.23
POLE-209	ENST00000536445	NRARP	Q7Z6K4	114 aa		13.6	□□□□□ -0.23
POLE-209	ENST00000536445	SLC51B	Q86UW2	128 aa		13.6	□□□□□ -0.23
POLE-209	ENST00000536445	PIM3	Q86V86	326 aa		13.6	□□□□□ -0.23
POLE-209	ENST00000536445	RYBP	Q8N488	228 aa	Predicted RBP	13.6	□□□□□ -0.23
POLE-209	ENST00000536445	ZNF576	Q9H609	170 aa		13.6	□□□□□ -0.23
POLE-209	ENST00000536445	SEMA4B	Q9NPR2	832 aa	Predicted RBP	13.6	□□□□□ -0.23
POLE-209	ENST00000536445	ATP13A2	Q9NQ11	1180 aa		13.6	□□□□□ -0.23
POLE-209	ENST00000536445	SPEF1	Q9Y4P9	236 aa		13.6	□□□□□ -0.23
POLE-209	ENST00000536445		H3BQ06	376 aa	Predicted RBP	13.59	□□□□□ -0.23
POLE-209	ENST00000536445	CD3EAP	O15446	510 aa	Known RBP	13.59	□□□□□ -0.23
POLE-209	ENST00000536445	KERA	O60938	352 aa		13.59	□□□□□ -0.23
POLE-209	ENST00000536445	PMPCB	O75439	489 aa		13.59	□□□□□ -0.23
POLE-209	ENST00000536445	LATS1	O95835	1130 aa		13.59	□□□□□ -0.23
POLE-209	ENST00000536445	RPS17	P08708	135 aa	Known RBP	13.59	□□□□□ -0.23
POLE-209	ENST00000536445	ZNF37A	P17032	561 aa	Predicted RBP	13.59	□□□□□ -0.23
POLE-209	ENST00000536445	TIE1	P35590	1138 aa		13.59	□□□□□ -0.23
POLE-209	ENST00000536445	HTR2B	P41595	481 aa		13.59	□□□□□ -0.23
POLE-209	ENST00000536445	SUOX	P51687	545 aa		13.59	□□□□□ -0.23
POLE-209	ENST00000536445	YBEY	P58557	167 aa	Predicted RBP	13.59	□□□□□ -0.23
POLE-209	ENST00000536445	SLC10A7	Q0GE19	358 aa		13.59	□□□□□ -0.23
POLE-209	ENST00000536445	ELP6	Q0PNE2	266 aa		13.59	□□□□□ -0.23
POLE-209	ENST00000536445	HYAL1	Q12794	435 aa		13.59	□□□□□ -0.23
POLE-209	ENST00000536445	SERINC3	Q13530	473 aa		13.59	□□□□□ -0.23
POLE-209	ENST00000536445	TIGD6	Q17RP2	521 aa		13.59	□□□□□ -0.23
POLE-209	ENST00000536445	RNF219	Q5W0B1	726 aa	Predicted RBP	13.59	□□□□□ -0.23
POLE-209	ENST00000536445	CPZ	Q66K79	652 aa		13.59	□□□□□ -0.23
POLE-209	ENST00000536445	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	13.59	□□□□□ -0.23
POLE-209	ENST00000536445	AHSA2	Q719I0	299 aa		13.59	□□□□□ -0.23
POLE-209	ENST00000536445	GALNT5	Q7Z7M9	940 aa		13.59	□□□□□ -0.23
POLE-209	ENST00000536445	GPR149	Q86SP6	731 aa		13.59	□□□□□ -0.23
POLE-209	ENST00000536445	CYP4Z1	Q86W10	505 aa		13.59	□□□□□ -0.23
POLE-209	ENST00000536445	SPNS2	Q8IVW8	549 aa		13.59	□□□□□ -0.23
POLE-209	ENST00000536445	FBXO39	Q8N4B4	442 aa		13.59	□□□□□ -0.23
POLE-209	ENST00000536445	HJURP	Q8NCD3	748 aa	Predicted RBP	13.59	□□□□□ -0.23
POLE-209	ENST00000536445	ZNF419	Q96HQ0	510 aa	Predicted RBP	13.59	□□□□□ -0.23
POLE-209	ENST00000536445	ITCH	Q96J02	903 aa		13.59	□□□□□ -0.23
POLE-209	ENST00000536445	MRGPRX2	Q96LB1	330 aa		13.59	□□□□□ -0.23
POLE-209	ENST00000536445	OR2A14	Q96R47	310 aa		13.59	□□□□□ -0.23
POLE-209	ENST00000536445	MFSD1	Q9H3U5	465 aa		13.59	□□□□□ -0.23
POLE-209	ENST00000536445	ARNT2	Q9HBZ2	717 aa		13.59	□□□□□ -0.23
POLE-209	ENST00000536445	TOR4A	Q9NXH8	423 aa		13.59	□□□□□ -0.23
POLE-209	ENST00000536445	UTS2R	Q9UKP6	389 aa		13.59	□□□□□ -0.23
POLE-209	ENST00000536445	TBC1D24	Q9ULP9	559 aa		13.59	□□□□□ -0.23
POLE-209	ENST00000536445	ACTL7A	Q9Y615	435 aa		13.59	□□□□□ -0.23
POLE-209	ENST00000536445		U3KQV3	271 aa		13.59	□□□□□ -0.23
POLE-209	ENST00000536445	SHOX	O15266	292 aa		13.59	□□□□□ -0.23
POLE-209	ENST00000536445	MITF	O75030	526 aa	Predicted RBP	13.59	□□□□□ -0.23
POLE-209	ENST00000536445	SEC22B	O75396	215 aa		13.59	□□□□□ -0.23
POLE-209	ENST00000536445	POLR2C	P19387	275 aa	Predicted RBP	13.59	□□□□□ -0.23
POLE-209	ENST00000536445	PIK3CB	P42338	1070 aa		13.59	□□□□□ -0.23
POLE-209	ENST00000536445	PPP1R8	Q12972	351 aa	Known RBP	13.59	□□□□□ -0.23
POLE-209	ENST00000536445	CDH18	Q13634	790 aa		13.59	□□□□□ -0.23
POLE-209	ENST00000536445	KCNC3	Q14003	757 aa		13.59	□□□□□ -0.23
POLE-209	ENST00000536445	MARC1	Q5VT66	337 aa		13.59	□□□□□ -0.23
POLE-209	ENST00000536445	KDM4D	Q6B0I6	523 aa		13.59	□□□□□ -0.23
POLE-209	ENST00000536445	SLC46A3	Q7Z3Q1	461 aa		13.59	□□□□□ -0.23
POLE-209	ENST00000536445	CACTIN-AS1	Q8N1I8	211 aa		13.59	□□□□□ -0.23
POLE-209	ENST00000536445	NATD1	Q8N6N6	113 aa		13.59	□□□□□ -0.23
POLE-209	ENST00000536445	GALNT6	Q8NCL4	622 aa		13.59	□□□□□ -0.23
POLE-209	ENST00000536445	STAG3L4	Q8TBR4	150 aa		13.59	□□□□□ -0.23
POLE-209	ENST00000536445	CDCA3	Q99618	268 aa	Predicted RBP	13.59	□□□□□ -0.23
POLE-209	ENST00000536445	SLC30A2	Q9BRI3	323 aa		13.59	□□□□□ -0.23
POLE-209	ENST00000536445	RHNO1	Q9BSD3	238 aa		13.59	□□□□□ -0.23
POLE-209	ENST00000536445	THUMPD3	Q9BV44	507 aa	Known RBP	13.59	□□□□□ -0.23
POLE-209	ENST00000536445	C1QTNF3	Q9BXJ4	246 aa		13.59	□□□□□ -0.23
POLE-209	ENST00000536445	ZNF717	Q9BY31	904 aa	Predicted RBP	13.59	□□□□□ -0.23
POLE-209	ENST00000536445	LINC00597	Q9H2U6	94 aa		13.59	□□□□□ -0.23
POLE-209	ENST00000536445	NSUN3	Q9H649	340 aa	Known RBP	13.59	□□□□□ -0.23
POLE-209	ENST00000536445	ATP13A1	Q9HD20	1204 aa		13.59	□□□□□ -0.23
POLE-209	ENST00000536445	NT5M	Q9NPB1	228 aa		13.59	□□□□□ -0.23
POLE-209	ENST00000536445	EVL	Q9UI08	416 aa	Predicted RBP	13.59	□□□□□ -0.23
POLE-209	ENST00000536445	MOSPD1	Q9UJG1	213 aa		13.59	□□□□□ -0.23
POLE-209	ENST00000536445	CFL2	Q9Y281	166 aa		13.59	□□□□□ -0.23
POLE-209	ENST00000536445	NEUROG3	Q9Y4Z2	214 aa		13.59	□□□□□ -0.23
POLE-209	ENST00000536445	MTCL1	Q9Y4B5	1905 aa	Known RBP	13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms