RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 GPRC5BQ9NZH0 403 aa12.96□□□□□ -0.33
RPAIN-205ENST00000536255 XPR1Q9UBH6 696 aa12.96□□□□□ -0.33
RPAIN-205ENST00000536255 DCDC2Q9UHG0 476 aa12.96□□□□□ -0.33
RPAIN-205ENST00000536255 TNPO3Q9Y5L0 923 aaKnown RBP12.96□□□□□ -0.33
RPAIN-205ENST00000536255 PCM1Q15154 2024 aa12.96□□□□□ -0.34
RPAIN-205ENST00000536255 IGKV1-8A0A0C4DH67 115 aa12.95□□□□□ -0.34
RPAIN-205ENST00000536255 A0A0J9YVX5 310 aa12.95□□□□□ -0.34
RPAIN-205ENST00000536255 C21orf140B9A014 251 aa12.95□□□□□ -0.34
RPAIN-205ENST00000536255 GOLGA8RI6L899 631 aa12.95□□□□□ -0.34
RPAIN-205ENST00000536255 ZSCAN9O15535 394 aaPredicted RBP12.95□□□□□ -0.34
RPAIN-205ENST00000536255 HCRTR1O43613 425 aa12.95□□□□□ -0.34
RPAIN-205ENST00000536255 CTSVO60911 334 aa12.95□□□□□ -0.34
RPAIN-205ENST00000536255 GLRA3O75311 464 aa12.95□□□□□ -0.34
RPAIN-205ENST00000536255 CDH1P12830 882 aa12.95□□□□□ -0.34
RPAIN-205ENST00000536255 MTHFD2P13995 350 aa12.95□□□□□ -0.34
RPAIN-205ENST00000536255 GNAZP19086 355 aa12.95□□□□□ -0.34
RPAIN-205ENST00000536255 TAC1P20366 129 aa12.95□□□□□ -0.34
RPAIN-205ENST00000536255 F8A1P23610 371 aa12.95□□□□□ -0.34
RPAIN-205ENST00000536255 HSPA7P48741 367 aa12.95□□□□□ -0.34
RPAIN-205ENST00000536255 ALDH18A1P54886 795 aaKnown RBP12.95□□□□□ -0.34
RPAIN-205ENST00000536255 RPS15AP62244 130 aaKnown RBP12.95□□□□□ -0.34
RPAIN-205ENST00000536255 YBX1P67809 324 aaKnown RBP12.95□□□□□ -0.34
RPAIN-205ENST00000536255 CDC16Q13042 620 aa12.95□□□□□ -0.34
RPAIN-205ENST00000536255 GPS2Q13227 327 aa12.95□□□□□ -0.34
RPAIN-205ENST00000536255 ZXDCQ2QGD7 858 aaPredicted RBP12.95□□□□□ -0.34
RPAIN-205ENST00000536255 METTL2BQ6P1Q9 378 aaKnown RBP12.95□□□□□ -0.34
RPAIN-205ENST00000536255 TTC29Q8NA56 475 aaPredicted RBP12.95□□□□□ -0.34
RPAIN-205ENST00000536255 ABHD11Q8NFV4 315 aa12.95□□□□□ -0.34
RPAIN-205ENST00000536255 UBTD2Q8WUN7 234 aa12.95□□□□□ -0.34
RPAIN-205ENST00000536255 RERGQ96A58 199 aaPredicted RBP12.95□□□□□ -0.34
RPAIN-205ENST00000536255 CLIP3Q96DZ5 547 aa12.95□□□□□ -0.34
RPAIN-205ENST00000536255 THAP11Q96EK4 314 aa12.95□□□□□ -0.34
RPAIN-205ENST00000536255 LRFN5Q96NI6 719 aa12.95□□□□□ -0.34
RPAIN-205ENST00000536255 OR4K3Q96R72 315 aa12.95□□□□□ -0.34
RPAIN-205ENST00000536255 TMEM79Q9BSE2 394 aa12.95□□□□□ -0.34
RPAIN-205ENST00000536255 CD244Q9BZW8 370 aa12.95□□□□□ -0.34
RPAIN-205ENST00000536255 ACTR5Q9H9F9 607 aaPredicted RBP12.95□□□□□ -0.34
RPAIN-205ENST00000536255 AKIRIN1Q9H9L7 192 aaPredicted RBP12.95□□□□□ -0.34
RPAIN-205ENST00000536255 PELI2Q9HAT8 420 aa12.95□□□□□ -0.34
RPAIN-205ENST00000536255 ZNF358Q9NW07 568 aa12.95□□□□□ -0.34
RPAIN-205ENST00000536255 CUEDC1Q9NWM3 386 aaPredicted RBP12.95□□□□□ -0.34
RPAIN-205ENST00000536255 CPSF2Q9P2I0 782 aaKnown RBP12.95□□□□□ -0.34
RPAIN-205ENST00000536255 LGALS13Q9UHV8 139 aa12.95□□□□□ -0.34
RPAIN-205ENST00000536255 KCND3Q9UK17 655 aa12.95□□□□□ -0.34
RPAIN-205ENST00000536255 SRPK3Q9UPE1 567 aa12.95□□□□□ -0.34
RPAIN-205ENST00000536255 PCDHGA6Q9Y5G7 932 aa12.95□□□□□ -0.34
RPAIN-205ENST00000536255 ATMQ13315 3056 aa12.95□□□□□ -0.34
RPAIN-205ENST00000536255 A0A1W2PPM1 405 aa12.94□□□□□ -0.34
RPAIN-205ENST00000536255 H3BMH7 237 aa12.94□□□□□ -0.34
RPAIN-205ENST00000536255 TK2O00142 265 aa12.94□□□□□ -0.34
RPAIN-205ENST00000536255 MEN1O00255 615 aa12.94□□□□□ -0.34
RPAIN-205ENST00000536255 TXNDC9O14530 226 aa12.94□□□□□ -0.34
RPAIN-205ENST00000536255 CLGNO14967 610 aa12.94□□□□□ -0.34
RPAIN-205ENST00000536255 TAPBPO15533 448 aa12.94□□□□□ -0.34
RPAIN-205ENST00000536255 CTIFO43310 598 aaKnown RBP12.94□□□□□ -0.34
RPAIN-205ENST00000536255 ZNF749O43361 778 aa12.94□□□□□ -0.34
RPAIN-205ENST00000536255 KLK8O60259 260 aa12.94□□□□□ -0.34
RPAIN-205ENST00000536255 CCNT2O60583 730 aaKnown RBP12.94□□□□□ -0.34
RPAIN-205ENST00000536255 KLK3P07288 261 aaPredicted RBP12.94□□□□□ -0.34
RPAIN-205ENST00000536255 TCN2P20062 427 aa12.94□□□□□ -0.34
RPAIN-205ENST00000536255 CXCR2P25025 360 aa12.94□□□□□ -0.34
RPAIN-205ENST00000536255 RORAP35398 523 aa12.94□□□□□ -0.34
RPAIN-205ENST00000536255 GDF5P43026 501 aa12.94□□□□□ -0.34
RPAIN-205ENST00000536255 ARSFP54793 590 aa12.94□□□□□ -0.34
RPAIN-205ENST00000536255 MC1RQ01726 317 aa12.94□□□□□ -0.34
RPAIN-205ENST00000536255 DNASE1L3Q13609 305 aa12.94□□□□□ -0.34
RPAIN-205ENST00000536255 GRM7Q14831 915 aa12.94□□□□□ -0.34
RPAIN-205ENST00000536255 SETDB1Q15047 1291 aa12.94□□□□□ -0.34
RPAIN-205ENST00000536255 PDK4Q16654 411 aa12.94□□□□□ -0.34
RPAIN-205ENST00000536255 PFKFB4Q16877 469 aa12.94□□□□□ -0.34
RPAIN-205ENST00000536255 KRT71Q3SY84 523 aa12.94□□□□□ -0.34
RPAIN-205ENST00000536255 YOD1Q5VVQ6 348 aaPredicted RBP12.94□□□□□ -0.34
RPAIN-205ENST00000536255 FBXO42Q6P3S6 717 aa12.94□□□□□ -0.34
RPAIN-205ENST00000536255 FAM199XQ6PEV8 388 aaPredicted RBP12.94□□□□□ -0.34
RPAIN-205ENST00000536255 ZNF517Q6ZMY9 492 aaPredicted RBP12.94□□□□□ -0.34
RPAIN-205ENST00000536255 TMPRSS11BQ86T26 416 aa12.94□□□□□ -0.34
RPAIN-205ENST00000536255 CYP4X1Q8N118 509 aa12.94□□□□□ -0.34
RPAIN-205ENST00000536255 ZNF655Q8N720 491 aaPredicted RBP12.94□□□□□ -0.34
RPAIN-205ENST00000536255 SNX31Q8N9S9 440 aa12.94□□□□□ -0.34
RPAIN-205ENST00000536255 SLC39A7Q92504 469 aa12.94□□□□□ -0.34
RPAIN-205ENST00000536255 NEIL2Q969S2 332 aa12.94□□□□□ -0.34
RPAIN-205ENST00000536255 AIF1LQ9BQI0 150 aa12.94□□□□□ -0.34
RPAIN-205ENST00000536255 NDC1Q9BTX1 674 aa12.94□□□□□ -0.34
RPAIN-205ENST00000536255 NLNQ9BYT8 704 aa12.94□□□□□ -0.34
RPAIN-205ENST00000536255 ENAMQ9NRM1 1142 aa12.94□□□□□ -0.34
RPAIN-205ENST00000536255 ARGLU1Q9NWB6 273 aaPredicted RBP12.94□□□□□ -0.34
RPAIN-205ENST00000536255 OPTCQ9UBM4 332 aa12.94□□□□□ -0.34
RPAIN-205ENST00000536255 MRPS18BQ9Y676 258 aaKnown RBP12.94□□□□□ -0.34
RPAIN-205ENST00000536255 CACNA1GO43497 2377 aa12.94□□□□□ -0.34
RPAIN-205ENST00000536255 SMG1Q96Q15 3661 aaKnown RBP12.94□□□□□ -0.34
RPAIN-205ENST00000536255 KCNE1BA0A087WTH5 132 aa12.93□□□□□ -0.34
RPAIN-205ENST00000536255 STX16-NPEPL1H3BU86 382 aa12.93□□□□□ -0.34
RPAIN-205ENST00000536255 K7EPI3 171 aa12.93□□□□□ -0.34
RPAIN-205ENST00000536255 COPEO14579 308 aa12.93□□□□□ -0.34
RPAIN-205ENST00000536255 STX16O14662 325 aa12.93□□□□□ -0.34
RPAIN-205ENST00000536255 HAT1O14929 419 aa12.93□□□□□ -0.34
RPAIN-205ENST00000536255 NKX2-8O15522 239 aa12.93□□□□□ -0.34
RPAIN-205ENST00000536255 H2AFYO75367 372 aaKnown RBP12.93□□□□□ -0.34
RPAIN-205ENST00000536255 KATNA1O75449 491 aa12.93□□□□□ -0.34
RPAIN-205ENST00000536255 SNRNP200O75643 2136 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms