RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 PEX16Q9Y5Y5 336 aa13.57□□□□□ -0.24
LIG1-203ENST00000536218 CCDC182A6NF36 153 aa13.56□□□□□ -0.24
LIG1-203ENST00000536218 PIP5K1BO14986 540 aa13.56□□□□□ -0.24
LIG1-203ENST00000536218 RHOBTB1O94844 696 aa13.56□□□□□ -0.24
LIG1-203ENST00000536218 EPOP01588 193 aa13.56□□□□□ -0.24
LIG1-203ENST00000536218 GABRR2P28476 465 aa13.56□□□□□ -0.24
LIG1-203ENST00000536218 GKP32189 559 aa13.56□□□□□ -0.24
LIG1-203ENST00000536218 TGFBR2P37173 567 aa13.56□□□□□ -0.24
LIG1-203ENST00000536218 MNX1P50219 401 aaPredicted RBP13.56□□□□□ -0.24
LIG1-203ENST00000536218 MTPNP58546 118 aa13.56□□□□□ -0.24
LIG1-203ENST00000536218 IRF3Q14653 427 aa13.56□□□□□ -0.24
LIG1-203ENST00000536218 ISCA2Q86U28 154 aa13.56□□□□□ -0.24
LIG1-203ENST00000536218 SLC38A4Q969I6 547 aa13.56□□□□□ -0.24
LIG1-203ENST00000536218 TMCO6Q96DC7 493 aa13.56□□□□□ -0.24
LIG1-203ENST00000536218 OR2A14Q96R47 310 aa13.56□□□□□ -0.24
LIG1-203ENST00000536218 SARS2Q9NP81 518 aaKnown RBP13.56□□□□□ -0.24
LIG1-203ENST00000536218 SPG21Q9NZD8 308 aa13.56□□□□□ -0.24
LIG1-203ENST00000536218 FKBPLQ9UIM3 349 aa13.56□□□□□ -0.24
LIG1-203ENST00000536218 CFL2Q9Y281 166 aa13.56□□□□□ -0.24
LIG1-203ENST00000536218 INSL5Q9Y5Q6 135 aa13.56□□□□□ -0.24
LIG1-203ENST00000536218 PPP6CO00743 305 aa13.56□□□□□ -0.24
LIG1-203ENST00000536218 SLC9A3R1O14745 358 aaPredicted RBP13.56□□□□□ -0.24
LIG1-203ENST00000536218 NDUFS3O75489 264 aa13.56□□□□□ -0.24
LIG1-203ENST00000536218 ERP29P30040 261 aaKnown RBP13.56□□□□□ -0.24
LIG1-203ENST00000536218 RHOAP61586 193 aa13.56□□□□□ -0.24
LIG1-203ENST00000536218 SLC35A2P78381 396 aa13.56□□□□□ -0.24
LIG1-203ENST00000536218 TP53BP2Q13625 1128 aa13.56□□□□□ -0.24
LIG1-203ENST00000536218 ZRANB3Q5FWF4 1079 aa13.56□□□□□ -0.24
LIG1-203ENST00000536218 TPGS2Q68CL5 300 aa13.56□□□□□ -0.24
LIG1-203ENST00000536218 OR8H3Q8N146 312 aa13.56□□□□□ -0.24
LIG1-203ENST00000536218 DTWD1Q8N5C7 304 aa13.56□□□□□ -0.24
LIG1-203ENST00000536218 SMG9Q9H0W8 520 aaKnown RBP13.56□□□□□ -0.24
LIG1-203ENST00000536218 KCNN2Q9H2S1 579 aa13.56□□□□□ -0.24
LIG1-203ENST00000536218 MRPL17Q9NRX2 175 aaKnown RBP13.56□□□□□ -0.24
LIG1-203ENST00000536218 TRMT6Q9UJA5 497 aaKnown RBP13.56□□□□□ -0.24
LIG1-203ENST00000536218 MAN2B2Q9Y2E5 1009 aa13.56□□□□□ -0.24
LIG1-203ENST00000536218 PCDHGB1Q9Y5G3 927 aa13.56□□□□□ -0.24
LIG1-203ENST00000536218 NCF1BA6NI72 391 aaPredicted RBP13.55□□□□□ -0.24
LIG1-203ENST00000536218 C2orf81A6NN90 581 aa13.55□□□□□ -0.24
LIG1-203ENST00000536218 NCF1CA8MVU1 366 aaPredicted RBP13.55□□□□□ -0.24
LIG1-203ENST00000536218 GSTA4O15217 222 aa13.55□□□□□ -0.24
LIG1-203ENST00000536218 OR1I1O60431 355 aa13.55□□□□□ -0.24
LIG1-203ENST00000536218 EFEMP2O95967 443 aa13.55□□□□□ -0.24
LIG1-203ENST00000536218 HPRP00739 348 aa13.55□□□□□ -0.24
LIG1-203ENST00000536218 NCF1P14598 390 aaPredicted RBP13.55□□□□□ -0.24
LIG1-203ENST00000536218 CA5AP35218 305 aa13.55□□□□□ -0.24
LIG1-203ENST00000536218 CSKP41240 450 aa13.55□□□□□ -0.24
LIG1-203ENST00000536218 CTSKP43235 329 aa13.55□□□□□ -0.24
LIG1-203ENST00000536218 RFX2P48378 723 aa13.55□□□□□ -0.24
LIG1-203ENST00000536218 PFKFB4Q16877 469 aa13.55□□□□□ -0.24
LIG1-203ENST00000536218 PRSS36Q5K4E3 855 aa13.55□□□□□ -0.24
LIG1-203ENST00000536218 CLVS2Q5SYC1 327 aa13.55□□□□□ -0.24
LIG1-203ENST00000536218 LAIR1Q6GTX8 287 aa13.55□□□□□ -0.24
LIG1-203ENST00000536218 PTRH1Q86Y79 214 aaKnown RBP13.55□□□□□ -0.24
LIG1-203ENST00000536218 HS6ST3Q8IZP7 471 aa13.55□□□□□ -0.24
LIG1-203ENST00000536218 ITPAQ9BY32 194 aa13.55□□□□□ -0.24
LIG1-203ENST00000536218 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.55□□□□□ -0.24
LIG1-203ENST00000536218 MUC13Q9H3R2 512 aa13.55□□□□□ -0.24
LIG1-203ENST00000536218 ERVMER34-1Q9H9K5 563 aa13.55□□□□□ -0.24
LIG1-203ENST00000536218 TBX21Q9UL17 535 aa13.55□□□□□ -0.24
LIG1-203ENST00000536218 LYVE1Q9Y5Y7 322 aa13.55□□□□□ -0.24
LIG1-203ENST00000536218 BTN3A3O00478 584 aa13.55□□□□□ -0.24
LIG1-203ENST00000536218 CLEC2LP0C7M8 214 aa13.55□□□□□ -0.24
LIG1-203ENST00000536218 HSMCR30P0CW71 290 aa13.55□□□□□ -0.24
LIG1-203ENST00000536218 ACVR2AP27037 513 aa13.55□□□□□ -0.24
LIG1-203ENST00000536218 B2MP61769 119 aa13.55□□□□□ -0.24
LIG1-203ENST00000536218 SEMG2Q02383 582 aa13.55□□□□□ -0.24
LIG1-203ENST00000536218 PTPRNQ16849 979 aa13.55□□□□□ -0.24
LIG1-203ENST00000536218 ARMCX4Q5H9R4 360 aa13.55□□□□□ -0.24
LIG1-203ENST00000536218 PAQR3Q6TCH7 311 aa13.55□□□□□ -0.24
LIG1-203ENST00000536218 C16orf62Q7Z3J2 963 aa13.55□□□□□ -0.24
LIG1-203ENST00000536218 PROSER1Q86XN7 944 aa13.55□□□□□ -0.24
LIG1-203ENST00000536218 PIANPQ8IYJ0 282 aa13.55□□□□□ -0.24
LIG1-203ENST00000536218 C7orf57Q8NEG2 295 aa13.55□□□□□ -0.24
LIG1-203ENST00000536218 ST13P5Q8NFI4 369 aaPredicted RBP13.55□□□□□ -0.24
LIG1-203ENST00000536218 OVCA2Q8WZ82 227 aa13.55□□□□□ -0.24
LIG1-203ENST00000536218 TOE1Q96GM8 510 aaKnown RBP13.55□□□□□ -0.24
LIG1-203ENST00000536218 REXO5Q96IC2 774 aaKnown RBP13.55□□□□□ -0.24
LIG1-203ENST00000536218 TEX37Q96LM6 180 aa13.55□□□□□ -0.24
LIG1-203ENST00000536218 KCNA7Q96RP8 456 aa13.55□□□□□ -0.24
LIG1-203ENST00000536218 SDHCQ99643 169 aaPredicted RBP13.55□□□□□ -0.24
LIG1-203ENST00000536218 AMBNQ9NP70 447 aa13.55□□□□□ -0.24
LIG1-203ENST00000536218 GALPQ9UBC7 116 aa13.55□□□□□ -0.24
LIG1-203ENST00000536218 ANKRD66B4E2M5 251 aa13.55□□□□□ -0.24
LIG1-203ENST00000536218 STX7O15400 261 aaKnown RBP13.55□□□□□ -0.24
LIG1-203ENST00000536218 PRAMEF12O95522 483 aa13.55□□□□□ -0.24
LIG1-203ENST00000536218 CD160O95971 181 aa13.55□□□□□ -0.24
LIG1-203ENST00000536218 ANXA6P08133 673 aa13.55□□□□□ -0.24
LIG1-203ENST00000536218 STC1P52823 247 aa13.55□□□□□ -0.24
LIG1-203ENST00000536218 RAB33AQ14088 237 aa13.55□□□□□ -0.24
LIG1-203ENST00000536218 PTCHD3Q3KNS1 767 aa13.55□□□□□ -0.24
LIG1-203ENST00000536218 ZMAT1Q5H9K5 638 aa13.55□□□□□ -0.24
LIG1-203ENST00000536218 ZNF767PQ75MW2 155 aa13.55□□□□□ -0.24
LIG1-203ENST00000536218 NLRP8Q86W28 1048 aa13.55□□□□□ -0.24
LIG1-203ENST00000536218 APCDD1Q8J025 514 aa13.55□□□□□ -0.24
LIG1-203ENST00000536218 OR10Q1Q8NGQ4 319 aa13.55□□□□□ -0.24
LIG1-203ENST00000536218 UBE2FQ969M7 185 aa13.55□□□□□ -0.24
LIG1-203ENST00000536218 TMEM80Q96HE8 168 aa13.55□□□□□ -0.24
LIG1-203ENST00000536218 PAWRQ96IZ0 340 aaKnown RBP13.55□□□□□ -0.24
LIG1-203ENST00000536218 RDH12Q96NR8 316 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms