RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 GPR65Q8IYL9 337 aa12.72□□□□□ -0.37
LDLR-203ENST00000535915 OR8J2Q8NGG1 315 aa12.72□□□□□ -0.37
LDLR-203ENST00000535915 ATL1Q8WXF7 558 aa12.72□□□□□ -0.37
LDLR-203ENST00000535915 TANKQ92844 425 aa12.72□□□□□ -0.37
LDLR-203ENST00000535915 SH3KBP1Q96B97 665 aa12.72□□□□□ -0.37
LDLR-203ENST00000535915 TIFAQ96CG3 184 aa12.72□□□□□ -0.37
LDLR-203ENST00000535915 ZSCAN5AQ9BUG6 496 aa12.72□□□□□ -0.37
LDLR-203ENST00000535915 TM9SF3Q9HD45 589 aa12.72□□□□□ -0.37
LDLR-203ENST00000535915 SPHK2Q9NRA0 654 aa12.72□□□□□ -0.37
LDLR-203ENST00000535915 SPATA6Q9NWH7 488 aaPredicted RBP12.72□□□□□ -0.37
LDLR-203ENST00000535915 PAK1IP1Q9NWT1 392 aaPredicted RBP12.72□□□□□ -0.37
LDLR-203ENST00000535915 STOX2Q9P2F5 926 aaPredicted RBP12.72□□□□□ -0.37
LDLR-203ENST00000535915 PSME2Q9UL46 239 aa12.72□□□□□ -0.37
LDLR-203ENST00000535915 ERVK-11Q9UQG0 969 aa12.72□□□□□ -0.37
LDLR-203ENST00000535915 XPNPEP2O43895 674 aa12.72□□□□□ -0.37
LDLR-203ENST00000535915 UGT2B11O75310 529 aa12.72□□□□□ -0.37
LDLR-203ENST00000535915 CSF2RAP15509 400 aa12.72□□□□□ -0.37
LDLR-203ENST00000535915 POLR2EP19388 210 aaKnown RBP12.72□□□□□ -0.37
LDLR-203ENST00000535915 BDKRB1P46663 353 aa12.72□□□□□ -0.37
LDLR-203ENST00000535915 ZNF33BQ06732 778 aa12.72□□□□□ -0.37
LDLR-203ENST00000535915 TEAD2Q15562 447 aa12.72□□□□□ -0.37
LDLR-203ENST00000535915 ZNF284Q2VY69 593 aa12.72□□□□□ -0.37
LDLR-203ENST00000535915 ZNF829Q3KNS6 432 aaPredicted RBP12.72□□□□□ -0.37
LDLR-203ENST00000535915 LY6G5CQ5SRR4 150 aa12.72□□□□□ -0.37
LDLR-203ENST00000535915 HENMT1Q5T8I9 393 aaKnown RBP12.72□□□□□ -0.37
LDLR-203ENST00000535915 ADNP2Q6IQ32 1131 aa12.72□□□□□ -0.37
LDLR-203ENST00000535915 PTOV1Q86YD1 416 aa12.72□□□□□ -0.37
LDLR-203ENST00000535915 LILRA3Q8N6C8 439 aaPredicted RBP12.72□□□□□ -0.37
LDLR-203ENST00000535915 CSF3RQ99062 836 aa12.72□□□□□ -0.37
LDLR-203ENST00000535915 TRIT1Q9H3H1 467 aaKnown RBP12.72□□□□□ -0.37
LDLR-203ENST00000535915 GPN2Q9H9Y4 310 aaPredicted RBP12.72□□□□□ -0.37
LDLR-203ENST00000535915 TBC1D23Q9NUY8 699 aa12.72□□□□□ -0.37
LDLR-203ENST00000535915 FBXO10Q9UK96 956 aa12.72□□□□□ -0.37
LDLR-203ENST00000535915 YY2O15391 372 aa12.71□□□□□ -0.37
LDLR-203ENST00000535915 ANGPTL1O95841 491 aa12.71□□□□□ -0.37
LDLR-203ENST00000535915 CATP04040 527 aaKnown RBP12.71□□□□□ -0.37
LDLR-203ENST00000535915 TIMP2P16035 220 aa12.71□□□□□ -0.37
LDLR-203ENST00000535915 WEE1P30291 646 aa12.71□□□□□ -0.37
LDLR-203ENST00000535915 NNMTP40261 264 aa12.71□□□□□ -0.37
LDLR-203ENST00000535915 HNF4AP41235 474 aa12.71□□□□□ -0.37
LDLR-203ENST00000535915 DAPP51397 102 aa12.71□□□□□ -0.37
LDLR-203ENST00000535915 CTSCP53634 463 aa12.71□□□□□ -0.37
LDLR-203ENST00000535915 VLDLRP98155 873 aa12.71□□□□□ -0.37
LDLR-203ENST00000535915 GRHL2Q6ISB3 625 aa12.71□□□□□ -0.37
LDLR-203ENST00000535915 RASGRP3Q8IV61 690 aa12.71□□□□□ -0.37
LDLR-203ENST00000535915 RASGEF1AQ8N9B8 481 aa12.71□□□□□ -0.37
LDLR-203ENST00000535915 SETD9Q8NE22 299 aa12.71□□□□□ -0.37
LDLR-203ENST00000535915 BORCS5Q969J3 196 aa12.71□□□□□ -0.37
LDLR-203ENST00000535915 HSH2DQ96JZ2 352 aa12.71□□□□□ -0.37
LDLR-203ENST00000535915 DUSP26Q9BV47 211 aa12.71□□□□□ -0.37
LDLR-203ENST00000535915 FUNDC2Q9BWH2 189 aa12.71□□□□□ -0.37
LDLR-203ENST00000535915 GABARAPL1Q9H0R8 117 aa12.71□□□□□ -0.37
LDLR-203ENST00000535915 MTG2Q9H4K7 406 aa12.71□□□□□ -0.37
LDLR-203ENST00000535915 TDP1Q9NUW8 608 aa12.71□□□□□ -0.37
LDLR-203ENST00000535915 BTBD3Q9Y2F9 522 aa12.71□□□□□ -0.37
LDLR-203ENST00000535915 H0YIV9 168 aa12.71□□□□□ -0.38
LDLR-203ENST00000535915 QSOX1O00391 747 aa12.71□□□□□ -0.38
LDLR-203ENST00000535915 ATG13O75143 517 aa12.71□□□□□ -0.38
LDLR-203ENST00000535915 ETHE1O95571 254 aa12.71□□□□□ -0.38
LDLR-203ENST00000535915 SLC16A8O95907 504 aa12.71□□□□□ -0.38
LDLR-203ENST00000535915 CCDC159P0C7I6 412 aa12.71□□□□□ -0.38
LDLR-203ENST00000535915 NR4A1P22736 598 aa12.71□□□□□ -0.38
LDLR-203ENST00000535915 PBLDP30039 288 aaPredicted RBP12.71□□□□□ -0.38
LDLR-203ENST00000535915 DNAJA1P31689 397 aaKnown RBP12.71□□□□□ -0.38
LDLR-203ENST00000535915 PGBD3Q8N328 593 aa12.71□□□□□ -0.38
LDLR-203ENST00000535915 C1orf52Q8N6N3 182 aaKnown RBP12.71□□□□□ -0.38
LDLR-203ENST00000535915 BTN2A2Q8WVV5 523 aa12.71□□□□□ -0.38
LDLR-203ENST00000535915 MUL1Q969V5 352 aa12.71□□□□□ -0.38
LDLR-203ENST00000535915 TBC1D20Q96BZ9 403 aa12.71□□□□□ -0.38
LDLR-203ENST00000535915 TPD52L3Q96J77 140 aa12.71□□□□□ -0.38
LDLR-203ENST00000535915 OR4K3Q96R72 315 aa12.71□□□□□ -0.38
LDLR-203ENST00000535915 ASPSCR1Q9BZE9 553 aa12.71□□□□□ -0.38
LDLR-203ENST00000535915 TPT1P8Q9HAU6 139 aa12.71□□□□□ -0.38
LDLR-203ENST00000535915 PDP1Q9P0J1 537 aaPredicted RBP12.71□□□□□ -0.38
LDLR-203ENST00000535915 KIF17Q9P2E2 1029 aa12.71□□□□□ -0.38
LDLR-203ENST00000535915 PCDHB11Q9Y5F2 797 aa12.71□□□□□ -0.38
LDLR-203ENST00000535915 LRRK1Q38SD2 2015 aa12.71□□□□□ -0.38
LDLR-203ENST00000535915 SCAMP2O15127 329 aaKnown RBP12.7□□□□□ -0.38
LDLR-203ENST00000535915 INMTO95050 263 aa12.7□□□□□ -0.38
LDLR-203ENST00000535915 ANXA4P09525 319 aaPredicted RBP12.7□□□□□ -0.38
LDLR-203ENST00000535915 ACRP10323 421 aa12.7□□□□□ -0.38
LDLR-203ENST00000535915 C21orf59P57076 290 aa12.7□□□□□ -0.38
LDLR-203ENST00000535915 DMC1Q14565 340 aa12.7□□□□□ -0.38
LDLR-203ENST00000535915 MOGQ16653 247 aa12.7□□□□□ -0.38
LDLR-203ENST00000535915 HKDC1Q2TB90 917 aa12.7□□□□□ -0.38
LDLR-203ENST00000535915 LDLRAP1Q5SW96 308 aa12.7□□□□□ -0.38
LDLR-203ENST00000535915 CPTPQ5TA50 214 aa12.7□□□□□ -0.38
LDLR-203ENST00000535915 GPR156Q8NFN8 814 aa12.7□□□□□ -0.38
LDLR-203ENST00000535915 STARD8Q92502 1023 aa12.7□□□□□ -0.38
LDLR-203ENST00000535915 INIPQ9NRY2 104 aa12.7□□□□□ -0.38
LDLR-203ENST00000535915 TBCCD1Q9NVR7 557 aa12.7□□□□□ -0.38
LDLR-203ENST00000535915 AASSQ9UDR5 926 aa12.7□□□□□ -0.38
LDLR-203ENST00000535915 IL36AQ9UHA7 158 aa12.7□□□□□ -0.38
LDLR-203ENST00000535915 SAMHD1Q9Y3Z3 626 aaKnown RBP12.7□□□□□ -0.38
LDLR-203ENST00000535915 GABRR3A8MPY1 467 aa12.7□□□□□ -0.38
LDLR-203ENST00000535915 XYLBO75191 536 aa12.7□□□□□ -0.38
LDLR-203ENST00000535915 CTSLP07711 333 aa12.7□□□□□ -0.38
LDLR-203ENST00000535915 CLTBP09497 229 aa12.7□□□□□ -0.38
LDLR-203ENST00000535915 INHBBP09529 407 aa12.7□□□□□ -0.38
LDLR-203ENST00000535915 PORP16435 677 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms