RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 GCGRP47871 477 aa12.55□□□□□ -0.4
TMEM258-202ENST00000535042 SNRPNP63162 240 aaKnown RBP12.55□□□□□ -0.4
TMEM258-202ENST00000535042 NFKB2Q00653 900 aa12.55□□□□□ -0.4
TMEM258-202ENST00000535042 DOC2AQ14183 400 aa12.55□□□□□ -0.4
TMEM258-202ENST00000535042 TGIF1Q15583 401 aa12.55□□□□□ -0.4
TMEM258-202ENST00000535042 CCDC153Q494R4 210 aa12.55□□□□□ -0.4
TMEM258-202ENST00000535042 UNC50Q53HI1 259 aa12.55□□□□□ -0.4
TMEM258-202ENST00000535042 WASHC2DQ5SRD0 308 aa12.55□□□□□ -0.4
TMEM258-202ENST00000535042 ATG9BQ674R7 924 aa12.55□□□□□ -0.4
TMEM258-202ENST00000535042 CYB5D1Q6P9G0 228 aa12.55□□□□□ -0.4
TMEM258-202ENST00000535042 ZYG11AQ6WRX3 759 aa12.55□□□□□ -0.4
TMEM258-202ENST00000535042 GOLGA7Q7Z5G4 137 aa12.55□□□□□ -0.4
TMEM258-202ENST00000535042 CROCCP2Q86T23 111 aa12.55□□□□□ -0.4
TMEM258-202ENST00000535042 TMEM126BQ8IUX1 230 aa12.55□□□□□ -0.4
TMEM258-202ENST00000535042 ZNF655Q8N720 491 aaPredicted RBP12.55□□□□□ -0.4
TMEM258-202ENST00000535042 TCP10LQ8TDR4 215 aa12.55□□□□□ -0.4
TMEM258-202ENST00000535042 FGF11Q92914 225 aa12.55□□□□□ -0.4
TMEM258-202ENST00000535042 WDR34Q96EX3 536 aa12.55□□□□□ -0.4
TMEM258-202ENST00000535042 SMC6Q96SB8 1091 aa12.55□□□□□ -0.4
TMEM258-202ENST00000535042 MACROD1Q9BQ69 325 aa12.55□□□□□ -0.4
TMEM258-202ENST00000535042 SARGQ9BW04 601 aa12.55□□□□□ -0.4
TMEM258-202ENST00000535042 ULBP3Q9BZM4 244 aa12.55□□□□□ -0.4
TMEM258-202ENST00000535042 AKIRIN1Q9H9L7 192 aaPredicted RBP12.55□□□□□ -0.4
TMEM258-202ENST00000535042 TMBIM4Q9HC24 238 aa12.55□□□□□ -0.4
TMEM258-202ENST00000535042 ZBTB26Q9HCK0 441 aa12.55□□□□□ -0.4
TMEM258-202ENST00000535042 ENAMQ9NRM1 1142 aa12.55□□□□□ -0.4
TMEM258-202ENST00000535042 GEMIN8Q9NWZ8 242 aaKnown RBP12.55□□□□□ -0.4
TMEM258-202ENST00000535042 PCTPQ9UKL6 214 aa12.55□□□□□ -0.4
TMEM258-202ENST00000535042 PCDHGA4Q9Y5G9 962 aa12.55□□□□□ -0.4
TMEM258-202ENST00000535042 TNPO3Q9Y5L0 923 aaKnown RBP12.55□□□□□ -0.4
TMEM258-202ENST00000535042 AKAP13Q12802 2813 aa12.55□□□□□ -0.4
TMEM258-202ENST00000535042 KCNE1BA0A087WTH5 132 aa12.54□□□□□ -0.4
TMEM258-202ENST00000535042 UQCRHLA0A096LP55 91 aa12.54□□□□□ -0.4
TMEM258-202ENST00000535042 TRBC2A0A5B9 178 aa12.54□□□□□ -0.4
TMEM258-202ENST00000535042 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.54□□□□□ -0.4
TMEM258-202ENST00000535042 PPP6CO00743 305 aa12.54□□□□□ -0.4
TMEM258-202ENST00000535042 OR7A17O14581 309 aa12.54□□□□□ -0.4
TMEM258-202ENST00000535042 CLGNO14967 610 aa12.54□□□□□ -0.4
TMEM258-202ENST00000535042 ZSCAN9O15535 394 aaPredicted RBP12.54□□□□□ -0.4
TMEM258-202ENST00000535042 OR1F1O43749 312 aa12.54□□□□□ -0.4
TMEM258-202ENST00000535042 WFS1O76024 890 aa12.54□□□□□ -0.4
TMEM258-202ENST00000535042 EIF2S1P05198 315 aaKnown RBP12.54□□□□□ -0.4
TMEM258-202ENST00000535042 UQCRHP07919 91 aa12.54□□□□□ -0.4
TMEM258-202ENST00000535042 MYZAPP0CAP1 466 aa12.54□□□□□ -0.4
TMEM258-202ENST00000535042 EPB42P16452 691 aa12.54□□□□□ -0.4
TMEM258-202ENST00000535042 SCTRP47872 440 aa12.54□□□□□ -0.4
TMEM258-202ENST00000535042 PRKAA2P54646 552 aa12.54□□□□□ -0.4
TMEM258-202ENST00000535042 CDH13P55290 713 aa12.54□□□□□ -0.4
TMEM258-202ENST00000535042 RPS15AP62244 130 aaKnown RBP12.54□□□□□ -0.4
TMEM258-202ENST00000535042 PCDH1Q08174 1060 aa12.54□□□□□ -0.4
TMEM258-202ENST00000535042 GPS2Q13227 327 aa12.54□□□□□ -0.4
TMEM258-202ENST00000535042 CHIT1Q13231 466 aa12.54□□□□□ -0.4
TMEM258-202ENST00000535042 GTF2H2Q13888 395 aa12.54□□□□□ -0.4
TMEM258-202ENST00000535042 E2F2Q14209 437 aa12.54□□□□□ -0.4
TMEM258-202ENST00000535042 SLBPQ14493 270 aaKnown RBP eCLIP12.54□□□□□ -0.4
TMEM258-202ENST00000535042 HKDC1Q2TB90 917 aa12.54□□□□□ -0.4
TMEM258-202ENST00000535042 PRTGQ2VWP7 1150 aa12.54□□□□□ -0.4
TMEM258-202ENST00000535042 XKR6Q5GH73 641 aa12.54□□□□□ -0.4
TMEM258-202ENST00000535042 GTF2H2CQ6P1K8 395 aa12.54□□□□□ -0.4
TMEM258-202ENST00000535042 TLDC1Q6P9B6 456 aa12.54□□□□□ -0.4
TMEM258-202ENST00000535042 HDXQ7Z353 690 aa12.54□□□□□ -0.4
TMEM258-202ENST00000535042 DTX1Q86Y01 620 aa12.54□□□□□ -0.4
TMEM258-202ENST00000535042 GPR135Q8IZ08 494 aa12.54□□□□□ -0.4
TMEM258-202ENST00000535042 DTWD1Q8N5C7 304 aa12.54□□□□□ -0.4
TMEM258-202ENST00000535042 CSNK1A1LQ8N752 337 aa12.54□□□□□ -0.4
TMEM258-202ENST00000535042 ANKRD53Q8N9V6 530 aa12.54□□□□□ -0.4
TMEM258-202ENST00000535042 MFSD9Q8NBP5 474 aa12.54□□□□□ -0.4
TMEM258-202ENST00000535042 GALNT6Q8NCL4 622 aa12.54□□□□□ -0.4
TMEM258-202ENST00000535042 ARMC2Q8NEN0 867 aa12.54□□□□□ -0.4
TMEM258-202ENST00000535042 SNIP1Q8TAD8 396 aaKnown RBP12.54□□□□□ -0.4
TMEM258-202ENST00000535042 ZNF483Q8TF39 744 aaPredicted RBP12.54□□□□□ -0.4
TMEM258-202ENST00000535042 TM4SF19Q96DZ7 209 aa12.54□□□□□ -0.4
TMEM258-202ENST00000535042 FAM111AQ96PZ2 611 aa12.54□□□□□ -0.4
TMEM258-202ENST00000535042 TMEM237Q96Q45 408 aa12.54□□□□□ -0.4
TMEM258-202ENST00000535042 AIF1LQ9BQI0 150 aa12.54□□□□□ -0.4
TMEM258-202ENST00000535042 C1QTNF3Q9BXJ4 246 aa12.54□□□□□ -0.4
TMEM258-202ENST00000535042 CAPS2Q9BXY5 557 aa12.54□□□□□ -0.4
TMEM258-202ENST00000535042 IPPKQ9H8X2 491 aa12.54□□□□□ -0.4
TMEM258-202ENST00000535042 IRAK4Q9NWZ3 460 aa12.54□□□□□ -0.4
TMEM258-202ENST00000535042 SENP1Q9P0U3 644 aa12.54□□□□□ -0.4
TMEM258-202ENST00000535042 ZNF490Q9ULM2 529 aaPredicted RBP12.54□□□□□ -0.4
TMEM258-202ENST00000535042 ANGPTL3Q9Y5C1 460 aa12.54□□□□□ -0.4
TMEM258-202ENST00000535042 PCDHB3Q9Y5E6 796 aa12.54□□□□□ -0.4
TMEM258-202ENST00000535042 A0A1B0GTL3 188 aa12.53□□□□□ -0.4
TMEM258-202ENST00000535042 FITM1A5D6W6 292 aa12.53□□□□□ -0.4
TMEM258-202ENST00000535042 RAD1O60671 282 aa12.53□□□□□ -0.4
TMEM258-202ENST00000535042 SASH3O75995 380 aa12.53□□□□□ -0.4
TMEM258-202ENST00000535042 MYL2P10916 166 aa12.53□□□□□ -0.4
TMEM258-202ENST00000535042 CPA3P15088 417 aa12.53□□□□□ -0.4
TMEM258-202ENST00000535042 TSPAN8P19075 237 aa12.53□□□□□ -0.4
TMEM258-202ENST00000535042 IMPDH1P20839 514 aa12.53□□□□□ -0.4
TMEM258-202ENST00000535042 CD82P27701 267 aa12.53□□□□□ -0.4
TMEM258-202ENST00000535042 RORAP35398 523 aa12.53□□□□□ -0.4
TMEM258-202ENST00000535042 GRK3P35626 688 aa12.53□□□□□ -0.4
TMEM258-202ENST00000535042 CASP2P42575 452 aa12.53□□□□□ -0.4
TMEM258-202ENST00000535042 HERVK_113P63132 956 aa12.53□□□□□ -0.4
TMEM258-202ENST00000535042 IRF8Q02556 426 aa12.53□□□□□ -0.4
TMEM258-202ENST00000535042 MPP2Q14168 576 aa12.53□□□□□ -0.4
TMEM258-202ENST00000535042 RBBP5Q15291 538 aaKnown RBP12.53□□□□□ -0.4
TMEM258-202ENST00000535042 TBCCQ15814 346 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms