RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 MTBPQ96DY7 904 aa13.4□□□□□ -0.26
VPS11-205ENST00000534551 OR2A5Q96R48 311 aa13.4□□□□□ -0.26
VPS11-205ENST00000534551 HAUS8Q9BT25 410 aa13.4□□□□□ -0.26
VPS11-205ENST00000534551 SLC7A5P2Q9GIP4 190 aa13.4□□□□□ -0.26
VPS11-205ENST00000534551 PCBD2Q9H0N5 130 aa13.4□□□□□ -0.26
VPS11-205ENST00000534551 CHST8Q9H2A9 424 aa13.4□□□□□ -0.26
VPS11-205ENST00000534551 ACSS2Q9NR19 701 aa13.4□□□□□ -0.26
VPS11-205ENST00000534551 TMEM216Q9P0N5 145 aa13.4□□□□□ -0.26
VPS11-205ENST00000534551 SERTAD3Q9UJW9 196 aa13.4□□□□□ -0.26
VPS11-205ENST00000534551 PTBP2Q9UKA9 531 aaKnown RBP13.4□□□□□ -0.26
VPS11-205ENST00000534551 PLAAQ9Y263 795 aa13.4□□□□□ -0.26
VPS11-205ENST00000534551 RUVBL1Q9Y265 456 aaKnown RBP13.4□□□□□ -0.26
VPS11-205ENST00000534551 MRPS2Q9Y399 296 aaKnown RBP13.4□□□□□ -0.26
VPS11-205ENST00000534551 DYRK1BQ9Y463 629 aa13.4□□□□□ -0.26
VPS11-205ENST00000534551 ATMQ13315 3056 aa13.39□□□□□ -0.27
VPS11-205ENST00000534551 CACNA1BQ00975 2339 aa13.39□□□□□ -0.27
VPS11-205ENST00000534551 TLDC2A0PJX2 215 aa13.39□□□□□ -0.27
VPS11-205ENST00000534551 TERTO14746 1132 aaKnown RBP13.39□□□□□ -0.27
VPS11-205ENST00000534551 SIX3O95343 332 aaPredicted RBP13.39□□□□□ -0.27
VPS11-205ENST00000534551 GFAPP14136 432 aa13.39□□□□□ -0.27
VPS11-205ENST00000534551 DLSTP36957 453 aa13.39□□□□□ -0.27
VPS11-205ENST00000534551 CXADRP78310 365 aa13.39□□□□□ -0.27
VPS11-205ENST00000534551 CYP4F2P78329 520 aa13.39□□□□□ -0.27
VPS11-205ENST00000534551 REEP5Q00765 189 aa13.39□□□□□ -0.27
VPS11-205ENST00000534551 CDC16Q13042 620 aa13.39□□□□□ -0.27
VPS11-205ENST00000534551 MAP7Q14244 749 aa13.39□□□□□ -0.27
VPS11-205ENST00000534551 SETDB1Q15047 1291 aa13.39□□□□□ -0.27
VPS11-205ENST00000534551 ACAP2Q15057 778 aa13.39□□□□□ -0.27
VPS11-205ENST00000534551 PFKFB4Q16877 469 aa13.39□□□□□ -0.27
VPS11-205ENST00000534551 ATP1A1-AS1Q5TC04 95 aa13.39□□□□□ -0.27
VPS11-205ENST00000534551 KLC3Q6P597 504 aa13.39□□□□□ -0.27
VPS11-205ENST00000534551 RPS27LQ71UM5 84 aaKnown RBP13.39□□□□□ -0.27
VPS11-205ENST00000534551 CCDC91Q7Z6B0 441 aa13.39□□□□□ -0.27
VPS11-205ENST00000534551 BPHLQ86WA6 291 aaPredicted RBP13.39□□□□□ -0.27
VPS11-205ENST00000534551 TDRPQ86YL5 185 aa13.39□□□□□ -0.27
VPS11-205ENST00000534551 TCAIMQ8N3R3 496 aa13.39□□□□□ -0.27
VPS11-205ENST00000534551 MREGQ8N565 214 aa13.39□□□□□ -0.27
VPS11-205ENST00000534551 PTGR2Q8N8N7 351 aaPredicted RBP13.39□□□□□ -0.27
VPS11-205ENST00000534551 ABHD11Q8NFV4 315 aa13.39□□□□□ -0.27
VPS11-205ENST00000534551 ZCCHC10Q8TBK6 192 aa13.39□□□□□ -0.27
VPS11-205ENST00000534551 UBTD2Q8WUN7 234 aa13.39□□□□□ -0.27
VPS11-205ENST00000534551 MOCOSQ96EN8 888 aa13.39□□□□□ -0.27
VPS11-205ENST00000534551 GBP5Q96PP8 586 aa13.39□□□□□ -0.27
VPS11-205ENST00000534551 DPH1Q9BZG8 443 aa13.39□□□□□ -0.27
VPS11-205ENST00000534551 C12orf65Q9H3J6 166 aaKnown RBP13.39□□□□□ -0.27
VPS11-205ENST00000534551 TMEM184CQ9NVA4 438 aa13.39□□□□□ -0.27
VPS11-205ENST00000534551 DNAJC11Q9NVH1 559 aa13.39□□□□□ -0.27
VPS11-205ENST00000534551 NDOR1Q9UHB4 597 aa13.39□□□□□ -0.27
VPS11-205ENST00000534551 SNX7Q9UNH6 387 aa13.39□□□□□ -0.27
VPS11-205ENST00000534551 PCDHGA4Q9Y5G9 962 aa13.39□□□□□ -0.27
VPS11-205ENST00000534551 MEN1O00255 615 aa13.38□□□□□ -0.27
VPS11-205ENST00000534551 MAP2K7O14733 419 aa13.38□□□□□ -0.27
VPS11-205ENST00000534551 FFAR3O14843 346 aa13.38□□□□□ -0.27
VPS11-205ENST00000534551 GPR42O15529 346 aa13.38□□□□□ -0.27
VPS11-205ENST00000534551 KRT15P19012 456 aa13.38□□□□□ -0.27
VPS11-205ENST00000534551 CD22P20273 847 aa13.38□□□□□ -0.27
VPS11-205ENST00000534551 GGT5P36269 586 aa13.38□□□□□ -0.27
VPS11-205ENST00000534551 CCR8P51685 355 aa13.38□□□□□ -0.27
VPS11-205ENST00000534551 ABHD18Q0P651 414 aa13.38□□□□□ -0.27
VPS11-205ENST00000534551 DNASE1L3Q13609 305 aa13.38□□□□□ -0.27
VPS11-205ENST00000534551 SLBPQ14493 270 aaKnown RBP eCLIP13.38□□□□□ -0.27
VPS11-205ENST00000534551 NAA25Q14CX7 972 aa13.38□□□□□ -0.27
VPS11-205ENST00000534551 TSNAXIP1Q2TAA8 658 aa13.38□□□□□ -0.27
VPS11-205ENST00000534551 PRTGQ2VWP7 1150 aa13.38□□□□□ -0.27
VPS11-205ENST00000534551 LGSNQ5TDP6 509 aa13.38□□□□□ -0.27
VPS11-205ENST00000534551 RHBDD2Q6NTF9 364 aa13.38□□□□□ -0.27
VPS11-205ENST00000534551 TLDC1Q6P9B6 456 aa13.38□□□□□ -0.27
VPS11-205ENST00000534551 NXPE4Q6UWF7 544 aa13.38□□□□□ -0.27
VPS11-205ENST00000534551 TTLL10Q6ZVT0 673 aa13.38□□□□□ -0.27
VPS11-205ENST00000534551 COX15Q7KZN9 410 aa13.38□□□□□ -0.27
VPS11-205ENST00000534551 PRSS41Q7RTY9 318 aa13.38□□□□□ -0.27
VPS11-205ENST00000534551 LRRC70Q7Z2Q7 622 aa13.38□□□□□ -0.27
VPS11-205ENST00000534551 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.38□□□□□ -0.27
VPS11-205ENST00000534551 C4orf33Q8N1A6 199 aa13.38□□□□□ -0.27
VPS11-205ENST00000534551 TMEM151AQ8N4L1 468 aa13.38□□□□□ -0.27
VPS11-205ENST00000534551 ARHGEF39Q8N4T4 335 aa13.38□□□□□ -0.27
VPS11-205ENST00000534551 RHEBL1Q8TAI7 183 aa13.38□□□□□ -0.27
VPS11-205ENST00000534551 PHF21BQ96EK2 531 aa13.38□□□□□ -0.27
VPS11-205ENST00000534551 CCNL2Q96S94 520 aaPredicted RBP13.38□□□□□ -0.27
VPS11-205ENST00000534551 CCDC77Q9BR77 488 aa13.38□□□□□ -0.27
VPS11-205ENST00000534551 GPN2Q9H9Y4 310 aaPredicted RBP13.38□□□□□ -0.27
VPS11-205ENST00000534551 CUTCQ9NTM9 273 aa13.38□□□□□ -0.27
VPS11-205ENST00000534551 EMCNQ9ULC0 261 aa13.38□□□□□ -0.27
VPS11-205ENST00000534551 SSUH2Q9Y2M2 353 aa13.38□□□□□ -0.27
VPS11-205ENST00000534551 MAU2Q9Y6X3 613 aa13.38□□□□□ -0.27
VPS11-205ENST00000534551 HYKKA2RU49 373 aa13.37□□□□□ -0.27
VPS11-205ENST00000534551 FITM1A5D6W6 292 aa13.37□□□□□ -0.27
VPS11-205ENST00000534551 SYCE1LA8MT33 242 aa13.37□□□□□ -0.27
VPS11-205ENST00000534551 OR1F1O43749 312 aa13.37□□□□□ -0.27
VPS11-205ENST00000534551 KLK8O60259 260 aa13.37□□□□□ -0.27
VPS11-205ENST00000534551 CNOT3O75175 753 aaKnown RBP13.37□□□□□ -0.27
VPS11-205ENST00000534551 CDH16O75309 829 aa13.37□□□□□ -0.27
VPS11-205ENST00000534551 STK16O75716 305 aa13.37□□□□□ -0.27
VPS11-205ENST00000534551 IPO13O94829 963 aaKnown RBP13.37□□□□□ -0.27
VPS11-205ENST00000534551 MT-ND3P03897 115 aa13.37□□□□□ -0.27
VPS11-205ENST00000534551 CAPN1P07384 714 aa13.37□□□□□ -0.27
VPS11-205ENST00000534551 PRKAR1AP10644 381 aa13.37□□□□□ -0.27
VPS11-205ENST00000534551 OR1D4P47884 311 aa13.37□□□□□ -0.27
VPS11-205ENST00000534551 RPS15AP62244 130 aaKnown RBP13.37□□□□□ -0.27
VPS11-205ENST00000534551 IFFO1Q0D2I5 559 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms