RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 PTPRZ1P23471 2315 aaPredicted RBP10.55□□□□□ -0.72
CCDC90B-218ENST00000533761 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.54□□□□□ -0.72
CCDC90B-218ENST00000533761 OR52A4PA6NMU1 304 aa10.54□□□□□ -0.72
CCDC90B-218ENST00000533761 E9PBE3 544 aa10.54□□□□□ -0.72
CCDC90B-218ENST00000533761 H0YIV9 168 aa10.54□□□□□ -0.72
CCDC90B-218ENST00000533761 SDHDO14521 159 aa10.54□□□□□ -0.72
CCDC90B-218ENST00000533761 KLHL41O60662 606 aa10.54□□□□□ -0.72
CCDC90B-218ENST00000533761 FKBP9O95302 570 aa10.54□□□□□ -0.72
CCDC90B-218ENST00000533761 HSD3B1P14060 373 aa10.54□□□□□ -0.72
CCDC90B-218ENST00000533761 IDO1P14902 403 aa10.54□□□□□ -0.72
CCDC90B-218ENST00000533761 LBPP18428 481 aa10.54□□□□□ -0.72
CCDC90B-218ENST00000533761 XRCC1P18887 633 aaPredicted RBP10.54□□□□□ -0.72
CCDC90B-218ENST00000533761 HSD3B2P26439 372 aa10.54□□□□□ -0.72
CCDC90B-218ENST00000533761 GRK3P35626 688 aa10.54□□□□□ -0.72
CCDC90B-218ENST00000533761 CASP2P42575 452 aa10.54□□□□□ -0.72
CCDC90B-218ENST00000533761 CLCA4Q14CN2 919 aa10.54□□□□□ -0.72
CCDC90B-218ENST00000533761 CPSF6Q16630 551 aaKnown RBP eCLIP10.54□□□□□ -0.72
CCDC90B-218ENST00000533761 LSM12Q3MHD2 195 aaKnown RBP10.54□□□□□ -0.72
CCDC90B-218ENST00000533761 CCSMST1Q4G0I0 132 aa10.54□□□□□ -0.72
CCDC90B-218ENST00000533761 STPG1Q5TH74 334 aa10.54□□□□□ -0.72
CCDC90B-218ENST00000533761 FRG2Q64ET8 278 aa10.54□□□□□ -0.72
CCDC90B-218ENST00000533761 ATG9BQ674R7 924 aa10.54□□□□□ -0.72
CCDC90B-218ENST00000533761 GRHL2Q6ISB3 625 aa10.54□□□□□ -0.72
CCDC90B-218ENST00000533761 KLHL35Q6PF15 583 aa10.54□□□□□ -0.72
CCDC90B-218ENST00000533761 IYDQ6PHW0 289 aa10.54□□□□□ -0.72
CCDC90B-218ENST00000533761 ATG14Q6ZNE5 492 aa10.54□□□□□ -0.72
CCDC90B-218ENST00000533761 MAVSQ7Z434 540 aa10.54□□□□□ -0.72
CCDC90B-218ENST00000533761 SPATA19Q7Z5L4 167 aa10.54□□□□□ -0.72
CCDC90B-218ENST00000533761 ALYREFQ86V81 257 aaKnown RBP10.54□□□□□ -0.72
CCDC90B-218ENST00000533761 AMIGO1Q86WK6 493 aa10.54□□□□□ -0.72
CCDC90B-218ENST00000533761 LCN9Q8WX39 176 aa10.54□□□□□ -0.72
CCDC90B-218ENST00000533761 METTL2AQ96IZ6 378 aaKnown RBP10.54□□□□□ -0.72
CCDC90B-218ENST00000533761 FRG2BQ96QU4 278 aa10.54□□□□□ -0.72
CCDC90B-218ENST00000533761 NMUR2Q9GZQ4 415 aa10.54□□□□□ -0.72
CCDC90B-218ENST00000533761 MYLK2Q9H1R3 596 aa10.54□□□□□ -0.72
CCDC90B-218ENST00000533761 SRMSQ9H3Y6 488 aa10.54□□□□□ -0.72
CCDC90B-218ENST00000533761 WDR55Q9H6Y2 383 aaPredicted RBP10.54□□□□□ -0.72
CCDC90B-218ENST00000533761 ACTR5Q9H9F9 607 aaPredicted RBP10.54□□□□□ -0.72
CCDC90B-218ENST00000533761 ABCF3Q9NUQ8 709 aa10.54□□□□□ -0.72
CCDC90B-218ENST00000533761 CAPN7Q9Y6W3 813 aa10.54□□□□□ -0.72
CCDC90B-218ENST00000533761 DNAH14Q0VDD8 3507 aa10.54□□□□□ -0.72
CCDC90B-218ENST00000533761 A6NCN8 305 aa10.53□□□□□ -0.72
CCDC90B-218ENST00000533761 PPP6CO00743 305 aa10.53□□□□□ -0.72
CCDC90B-218ENST00000533761 GIMD1P0DJR0 217 aa10.53□□□□□ -0.72
CCDC90B-218ENST00000533761 CALB2P22676 271 aa10.53□□□□□ -0.72
CCDC90B-218ENST00000533761 GSTM2P28161 218 aa10.53□□□□□ -0.72
CCDC90B-218ENST00000533761 MAPK1P28482 360 aa10.53□□□□□ -0.72
CCDC90B-218ENST00000533761 PRDX3P30048 256 aaKnown RBP10.53□□□□□ -0.72
CCDC90B-218ENST00000533761 PKLRP30613 574 aa10.53□□□□□ -0.72
CCDC90B-218ENST00000533761 LIMK1P53667 647 aa10.53□□□□□ -0.72
CCDC90B-218ENST00000533761 CSTF3Q12996 717 aaKnown RBP10.53□□□□□ -0.72
CCDC90B-218ENST00000533761 SQLEQ14534 574 aa10.53□□□□□ -0.72
CCDC90B-218ENST00000533761 RPS6KA2Q15349 733 aa10.53□□□□□ -0.72
CCDC90B-218ENST00000533761 GSTA3Q16772 222 aa10.53□□□□□ -0.72
CCDC90B-218ENST00000533761 OGFOD2Q6N063 350 aa10.53□□□□□ -0.72
CCDC90B-218ENST00000533761 MED27Q6P2C8 311 aa10.53□□□□□ -0.72
CCDC90B-218ENST00000533761 OGFOD3Q6PK18 319 aa10.53□□□□□ -0.72
CCDC90B-218ENST00000533761 TMPRSS11BQ86T26 416 aa10.53□□□□□ -0.72
CCDC90B-218ENST00000533761 BPHLQ86WA6 291 aaPredicted RBP10.53□□□□□ -0.72
CCDC90B-218ENST00000533761 KIAA2013Q8IYS2 634 aa10.53□□□□□ -0.72
CCDC90B-218ENST00000533761 EID2Q8N6I1 236 aa10.53□□□□□ -0.72
CCDC90B-218ENST00000533761 PPFIBP2Q8ND30 876 aa10.53□□□□□ -0.72
CCDC90B-218ENST00000533761 TTLQ8NG68 377 aa10.53□□□□□ -0.72
CCDC90B-218ENST00000533761 OR52E1Q8NGJ3 308 aa10.53□□□□□ -0.72
CCDC90B-218ENST00000533761 MAPK15Q8TD08 544 aa10.53□□□□□ -0.72
CCDC90B-218ENST00000533761 ZDHHC1Q8WTX9 485 aa10.53□□□□□ -0.72
CCDC90B-218ENST00000533761 SELENOMQ8WWX9 145 aa10.53□□□□□ -0.72
CCDC90B-218ENST00000533761 WDR34Q96EX3 536 aa10.53□□□□□ -0.72
CCDC90B-218ENST00000533761 PPP1R36Q96LQ0 422 aa10.53□□□□□ -0.72
CCDC90B-218ENST00000533761 KCNA7Q96RP8 456 aa10.53□□□□□ -0.72
CCDC90B-218ENST00000533761 AIF1LQ9BQI0 150 aa10.53□□□□□ -0.72
CCDC90B-218ENST00000533761 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.53□□□□□ -0.72
CCDC90B-218ENST00000533761 PELI2Q9HAT8 420 aa10.53□□□□□ -0.72
CCDC90B-218ENST00000533761 BRF2Q9HAW0 419 aa10.53□□□□□ -0.72
CCDC90B-218ENST00000533761 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.53□□□□□ -0.72
CCDC90B-218ENST00000533761 TMEM45AQ9NWC5 275 aa10.53□□□□□ -0.72
CCDC90B-218ENST00000533761 ZNF490Q9ULM2 529 aaPredicted RBP10.53□□□□□ -0.72
CCDC90B-218ENST00000533761 TMED5Q9Y3A6 229 aa10.53□□□□□ -0.72
CCDC90B-218ENST00000533761 RNF11Q9Y3C5 154 aa10.53□□□□□ -0.72
CCDC90B-218ENST00000533761 TIMM22Q9Y584 194 aa10.53□□□□□ -0.72
CCDC90B-218ENST00000533761 ENTPD2Q9Y5L3 495 aa10.53□□□□□ -0.72
CCDC90B-218ENST00000533761 ARHGEF17Q96PE2 2063 aaPredicted RBP10.53□□□□□ -0.72
CCDC90B-218ENST00000533761 GVINP1Q7Z2Y8 2422 aa10.53□□□□□ -0.72
CCDC90B-218ENST00000533761 SERTM1A2A2V5 107 aa10.52□□□□□ -0.72
CCDC90B-218ENST00000533761 B4DGG1 531 aa10.52□□□□□ -0.72
CCDC90B-218ENST00000533761 E7EQ34 232 aa10.52□□□□□ -0.72
CCDC90B-218ENST00000533761 MANBAO00462 879 aa10.52□□□□□ -0.72
CCDC90B-218ENST00000533761 TRIM38O00635 465 aa10.52□□□□□ -0.72
CCDC90B-218ENST00000533761 ZW10O43264 779 aa10.52□□□□□ -0.72
CCDC90B-218ENST00000533761 LINC00032P0C843 101 aa10.52□□□□□ -0.72
CCDC90B-218ENST00000533761 C1GALT1C1LP0DN25 315 aa10.52□□□□□ -0.72
CCDC90B-218ENST00000533761 CD59P13987 128 aa10.52□□□□□ -0.72
CCDC90B-218ENST00000533761 NPPBP16860 134 aa10.52□□□□□ -0.72
CCDC90B-218ENST00000533761 ATP4BP51164 291 aa10.52□□□□□ -0.72
CCDC90B-218ENST00000533761 CCR8P51685 355 aa10.52□□□□□ -0.72
CCDC90B-218ENST00000533761 FOXA1P55317 472 aa10.52□□□□□ -0.72
CCDC90B-218ENST00000533761 ERVK-8P63133 956 aa10.52□□□□□ -0.72
CCDC90B-218ENST00000533761 E2F2Q14209 437 aa10.52□□□□□ -0.72
CCDC90B-218ENST00000533761 GRB7Q14451 532 aa10.52□□□□□ -0.72
CCDC90B-218ENST00000533761 KIR2DS3Q14952 304 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms