RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 L3HYPDHQ96EM0 354 aa16.73■□□□□ 0.27
NXF1-216ENST00000533499 ZFYVE21Q9BQ24 234 aa16.73■□□□□ 0.27
NXF1-216ENST00000533499 SHCBP1LQ9BZQ2 653 aa16.73■□□□□ 0.27
NXF1-216ENST00000533499 SLC7A5P2Q9GIP4 190 aa16.73■□□□□ 0.27
NXF1-216ENST00000533499 DRC3Q9H069 523 aa16.73■□□□□ 0.27
NXF1-216ENST00000533499 SPNS1Q9H2V7 528 aa16.73■□□□□ 0.27
NXF1-216ENST00000533499 APMAPQ9HDC9 416 aa16.73■□□□□ 0.27
NXF1-216ENST00000533499 STARD5Q9NSY2 213 aa16.73■□□□□ 0.27
NXF1-216ENST00000533499 WDR70Q9NW82 654 aa16.73■□□□□ 0.27
NXF1-216ENST00000533499 SERTAD3Q9UJW9 196 aa16.73■□□□□ 0.27
NXF1-216ENST00000533499 LOC105369274A0A096LPK9 316 aa16.72■□□□□ 0.27
NXF1-216ENST00000533499 LOC102723532A0A0G2JNH3 316 aa16.72■□□□□ 0.27
NXF1-216ENST00000533499 OR2B3O76000 313 aa16.72■□□□□ 0.27
NXF1-216ENST00000533499 PCNAP12004 261 aa16.72■□□□□ 0.27
NXF1-216ENST00000533499 EZRP15311 586 aaKnown RBP16.72■□□□□ 0.27
NXF1-216ENST00000533499 EPORP19235 508 aa16.72■□□□□ 0.27
NXF1-216ENST00000533499 CXCR2P25025 360 aa16.72■□□□□ 0.27
NXF1-216ENST00000533499 ETV4P43268 484 aa16.72■□□□□ 0.27
NXF1-216ENST00000533499 CCR10P46092 362 aa16.72■□□□□ 0.27
NXF1-216ENST00000533499 DNAJB13P59910 316 aa16.72■□□□□ 0.27
NXF1-216ENST00000533499 MC2RQ01718 297 aa16.72■□□□□ 0.27
NXF1-216ENST00000533499 PAGE2BQ5JRK9 111 aa16.72■□□□□ 0.27
NXF1-216ENST00000533499 FRMPD2BQ6IN97 320 aa16.72■□□□□ 0.27
NXF1-216ENST00000533499 METTL2BQ6P1Q9 378 aaKnown RBP16.72■□□□□ 0.27
NXF1-216ENST00000533499 FBXO42Q6P3S6 717 aa16.72■□□□□ 0.27
NXF1-216ENST00000533499 MILR1Q7Z6M3 343 aa16.72■□□□□ 0.27
NXF1-216ENST00000533499 GPR135Q8IZ08 494 aa16.72■□□□□ 0.27
NXF1-216ENST00000533499 OR4N4Q8N0Y3 316 aa16.72■□□□□ 0.27
NXF1-216ENST00000533499 ABHD11Q8NFV4 315 aa16.72■□□□□ 0.27
NXF1-216ENST00000533499 OR52B6Q8NGF0 335 aa16.72■□□□□ 0.27
NXF1-216ENST00000533499 OR1L3Q8NH93 324 aa16.72■□□□□ 0.27
NXF1-216ENST00000533499 USP7Q93009 1102 aa16.72■□□□□ 0.27
NXF1-216ENST00000533499 PTCD3Q96EY7 689 aaKnown RBP16.72■□□□□ 0.27
NXF1-216ENST00000533499 GATA5Q9BWX5 397 aaPredicted RBP16.72■□□□□ 0.27
NXF1-216ENST00000533499 SPRTNQ9H040 489 aaPredicted RBP16.72■□□□□ 0.27
NXF1-216ENST00000533499 POLR1BQ9H9Y6 1135 aa16.72■□□□□ 0.27
NXF1-216ENST00000533499 GEMIN8Q9NWZ8 242 aaKnown RBP16.72■□□□□ 0.27
NXF1-216ENST00000533499 SIDT1Q9NXL6 827 aaKnown RBP16.72■□□□□ 0.27
NXF1-216ENST00000533499 RNF11Q9Y3C5 154 aa16.72■□□□□ 0.27
NXF1-216ENST00000533499 SPTBP11277 2137 aa16.72■□□□□ 0.27
NXF1-216ENST00000533499 MDC1Q14676 2089 aaKnown RBP16.71■□□□□ 0.27
NXF1-216ENST00000533499 ADAMTS20P59510 1910 aa16.71■□□□□ 0.27
NXF1-216ENST00000533499 A0A1W2PNU3 283 aaPredicted RBP16.71■□□□□ 0.27
NXF1-216ENST00000533499 TRBC2A0A5B9 178 aa16.71■□□□□ 0.27
NXF1-216ENST00000533499 B4E171 279 aa16.71■□□□□ 0.27
NXF1-216ENST00000533499 H0YGG7 62 aa16.71■□□□□ 0.27
NXF1-216ENST00000533499 PPP6CO00743 305 aa16.71■□□□□ 0.27
NXF1-216ENST00000533499 OR7A17O14581 309 aa16.71■□□□□ 0.27
NXF1-216ENST00000533499 PRAMEF4O60810 478 aa16.71■□□□□ 0.27
NXF1-216ENST00000533499 CRCPO75575 148 aa16.71■□□□□ 0.27
NXF1-216ENST00000533499 CLDN9O95484 217 aa16.71■□□□□ 0.27
NXF1-216ENST00000533499 OTCP00480 354 aa16.71■□□□□ 0.27
NXF1-216ENST00000533499 CTSBP07858 339 aa16.71■□□□□ 0.27
NXF1-216ENST00000533499 BCL6P41182 706 aa16.71■□□□□ 0.27
NXF1-216ENST00000533499 TSPAN7P41732 249 aa16.71■□□□□ 0.27
NXF1-216ENST00000533499 ITGA1P56199 1179 aa16.71■□□□□ 0.27
NXF1-216ENST00000533499 ARF3P61204 181 aaPredicted RBP16.71■□□□□ 0.27
NXF1-216ENST00000533499 RPS15AP62244 130 aaKnown RBP16.71■□□□□ 0.27
NXF1-216ENST00000533499 PPP2R2AP63151 447 aa16.71■□□□□ 0.27
NXF1-216ENST00000533499 REEP5Q00765 189 aa16.71■□□□□ 0.27
NXF1-216ENST00000533499 LAPTM5Q13571 262 aa16.71■□□□□ 0.27
NXF1-216ENST00000533499 DDX39BQ13838 428 aaKnown RBP16.71■□□□□ 0.27
NXF1-216ENST00000533499 CHI3L2Q15782 390 aa16.71■□□□□ 0.27
NXF1-216ENST00000533499 CPSF6Q16630 551 aaKnown RBP eCLIP16.71■□□□□ 0.27
NXF1-216ENST00000533499 DCAF12Q5T6F0 453 aa16.71■□□□□ 0.27
NXF1-216ENST00000533499 TMEM164Q5U3C3 297 aa16.71■□□□□ 0.27
NXF1-216ENST00000533499 PRAMEF9Q5VWM5 478 aa16.71■□□□□ 0.27
NXF1-216ENST00000533499 TTC19Q6DKK2 380 aaPredicted RBP16.71■□□□□ 0.27
NXF1-216ENST00000533499 CYB5D1Q6P9G0 228 aa16.71■□□□□ 0.27
NXF1-216ENST00000533499 RNF44Q7L0R7 432 aa16.71■□□□□ 0.27
NXF1-216ENST00000533499 PPP1R3BQ86XI6 285 aa16.71■□□□□ 0.27
NXF1-216ENST00000533499 TMEM126BQ8IUX1 230 aa16.71■□□□□ 0.27
NXF1-216ENST00000533499 PMEPA1Q969W9 287 aa16.71■□□□□ 0.27
NXF1-216ENST00000533499 PRR11Q96HE9 360 aaPredicted RBP16.71■□□□□ 0.27
NXF1-216ENST00000533499 TAAR9Q96RI9 348 aa16.71■□□□□ 0.27
NXF1-216ENST00000533499 MACROD1Q9BQ69 325 aa16.71■□□□□ 0.27
NXF1-216ENST00000533499 EFCAB11Q9BUY7 163 aa16.71■□□□□ 0.27
NXF1-216ENST00000533499 ZBTB26Q9HCK0 441 aa16.71■□□□□ 0.27
NXF1-216ENST00000533499 MID1IP1Q9NPA3 183 aa16.71■□□□□ 0.27
NXF1-216ENST00000533499 TRABD2BA6NFA1 517 aa16.7■□□□□ 0.26
NXF1-216ENST00000533499 FFAR3O14843 346 aa16.7■□□□□ 0.26
NXF1-216ENST00000533499 GPR42O15529 346 aa16.7■□□□□ 0.26
NXF1-216ENST00000533499 LCMT2O60294 686 aaKnown RBP16.7■□□□□ 0.26
NXF1-216ENST00000533499 OR4F21O95013 312 aa16.7■□□□□ 0.26
NXF1-216ENST00000533499 ADRB1P08588 477 aa16.7■□□□□ 0.26
NXF1-216ENST00000533499 BGNP21810 368 aa16.7■□□□□ 0.26
NXF1-216ENST00000533499 WDR4P57081 412 aaKnown RBP16.7■□□□□ 0.26
NXF1-216ENST00000533499 RAB15P59190 212 aa16.7■□□□□ 0.26
NXF1-216ENST00000533499 LCP2Q13094 533 aa16.7■□□□□ 0.26
NXF1-216ENST00000533499 SGO1Q5FBB7 561 aa16.7■□□□□ 0.26
NXF1-216ENST00000533499 WASHC2DQ5SRD0 308 aa16.7■□□□□ 0.26
NXF1-216ENST00000533499 TMIGD1Q6UXZ0 262 aa16.7■□□□□ 0.26
NXF1-216ENST00000533499 CEACAM20Q6UY09 585 aa16.7■□□□□ 0.26
NXF1-216ENST00000533499 GPRIN3Q6ZVF9 776 aa16.7■□□□□ 0.26
NXF1-216ENST00000533499 ZNF655Q8N720 491 aaPredicted RBP16.7■□□□□ 0.26
NXF1-216ENST00000533499 CSNK1A1LQ8N752 337 aa16.7■□□□□ 0.26
NXF1-216ENST00000533499 BMPERQ8N8U9 685 aa16.7■□□□□ 0.26
NXF1-216ENST00000533499 MFSD9Q8NBP5 474 aa16.7■□□□□ 0.26
NXF1-216ENST00000533499 OR4F6Q8NGB9 312 aa16.7■□□□□ 0.26
NXF1-216ENST00000533499 OR4K1Q8NGD4 311 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms