RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 HKDC1Q2TB90 917 aa13.3□□□□□ -0.28
TSPAN4-220ENST00000532375 LINC00303Q3SY05 128 aa13.3□□□□□ -0.28
TSPAN4-220ENST00000532375 FBXO48Q5FWF7 155 aa13.3□□□□□ -0.28
TSPAN4-220ENST00000532375 ATP1A1-AS1Q5TC04 95 aa13.3□□□□□ -0.28
TSPAN4-220ENST00000532375 TIFABQ6ZNK6 161 aa13.3□□□□□ -0.28
TSPAN4-220ENST00000532375 TTLL10Q6ZVT0 673 aa13.3□□□□□ -0.28
TSPAN4-220ENST00000532375 RAPH1Q70E73 1250 aa13.3□□□□□ -0.28
TSPAN4-220ENST00000532375 COX15Q7KZN9 410 aa13.3□□□□□ -0.28
TSPAN4-220ENST00000532375 TBC1D1Q86TI0 1168 aaPredicted RBP13.3□□□□□ -0.28
TSPAN4-220ENST00000532375 TMEM151AQ8N4L1 468 aa13.3□□□□□ -0.28
TSPAN4-220ENST00000532375 ZNF740Q8NDX6 193 aa13.3□□□□□ -0.28
TSPAN4-220ENST00000532375 RHEBL1Q8TAI7 183 aa13.3□□□□□ -0.28
TSPAN4-220ENST00000532375 STAG3L4Q8TBR4 150 aa13.3□□□□□ -0.28
TSPAN4-220ENST00000532375 ADAMTS17Q8TE56 1095 aa13.3□□□□□ -0.28
TSPAN4-220ENST00000532375 MZB1Q8WU39 189 aa13.3□□□□□ -0.28
TSPAN4-220ENST00000532375 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.3□□□□□ -0.28
TSPAN4-220ENST00000532375 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.3□□□□□ -0.287e-6■■□□□ 11.7
TSPAN4-220ENST00000532375 ESAMQ96AP7 390 aa13.3□□□□□ -0.28
TSPAN4-220ENST00000532375 NDC1Q9BTX1 674 aa13.3□□□□□ -0.28
TSPAN4-220ENST00000532375 ACTL8Q9H568 366 aa13.3□□□□□ -0.28
TSPAN4-220ENST00000532375 ALG9Q9H6U8 611 aa13.3□□□□□ -0.28
TSPAN4-220ENST00000532375 FETUBQ9UGM5 382 aa13.3□□□□□ -0.28
TSPAN4-220ENST00000532375 KCND3Q9UK17 655 aa13.3□□□□□ -0.28
TSPAN4-220ENST00000532375 RUVBL1Q9Y265 456 aaKnown RBP13.3□□□□□ -0.28
TSPAN4-220ENST00000532375 ASB1Q9Y576 335 aa13.3□□□□□ -0.28
TSPAN4-220ENST00000532375 SCN3AQ9NY46 2000 aa13.3□□□□□ -0.28
TSPAN4-220ENST00000532375 EXOC1LA0A1B0GW35 172 aa13.29□□□□□ -0.28
TSPAN4-220ENST00000532375 A0A1B0GX78 115 aa13.29□□□□□ -0.28
TSPAN4-220ENST00000532375 FEZF1A0PJY2 475 aa13.29□□□□□ -0.28
TSPAN4-220ENST00000532375 NCF1BA6NI72 391 aaPredicted RBP13.29□□□□□ -0.28
TSPAN4-220ENST00000532375 NCF1CA8MVU1 366 aaPredicted RBP13.29□□□□□ -0.28
TSPAN4-220ENST00000532375 TRIM49D1C9J1S8 452 aa13.29□□□□□ -0.28
TSPAN4-220ENST00000532375 MAP2K7O14733 419 aa13.29□□□□□ -0.28
TSPAN4-220ENST00000532375 FOXS1O43638 330 aa13.29□□□□□ -0.28
TSPAN4-220ENST00000532375 KLK8O60259 260 aa13.29□□□□□ -0.28
TSPAN4-220ENST00000532375 KERAO60938 352 aa13.29□□□□□ -0.28
TSPAN4-220ENST00000532375 EIF2S1P05198 315 aaKnown RBP13.29□□□□□ -0.28
TSPAN4-220ENST00000532375 NCF1P14598 390 aaPredicted RBP13.29□□□□□ -0.28
TSPAN4-220ENST00000532375 BCL6P41182 706 aa13.29□□□□□ -0.28
TSPAN4-220ENST00000532375 SERPINB8P50452 374 aa13.29□□□□□ -0.28
TSPAN4-220ENST00000532375 DCDP81605 110 aaKnown RBP13.29□□□□□ -0.28
TSPAN4-220ENST00000532375 NCF4Q15080 339 aa13.29□□□□□ -0.28
TSPAN4-220ENST00000532375 FAM214AQ32MH5 1076 aa13.29□□□□□ -0.28
TSPAN4-220ENST00000532375 NKAIN1Q4KMZ8 207 aa13.29□□□□□ -0.28
TSPAN4-220ENST00000532375 SULT1C3Q6IMI6 304 aa13.29□□□□□ -0.28
TSPAN4-220ENST00000532375 SLCO4C1Q6ZQN7 724 aa13.29□□□□□ -0.28
TSPAN4-220ENST00000532375 ADCK2Q7Z695 626 aa13.29□□□□□ -0.28
TSPAN4-220ENST00000532375 CSNK1A1LQ8N752 337 aa13.29□□□□□ -0.28
TSPAN4-220ENST00000532375 ENDOVQ8N8Q3 282 aaKnown RBP13.29□□□□□ -0.28
TSPAN4-220ENST00000532375 SLC5A11Q8WWX8 675 aa13.29□□□□□ -0.28
TSPAN4-220ENST00000532375 EGFL8Q99944 293 aa13.29□□□□□ -0.28
TSPAN4-220ENST00000532375 TCFL5Q9UL49 500 aa13.29□□□□□ -0.28
TSPAN4-220ENST00000532375 MRPS2Q9Y399 296 aaKnown RBP13.29□□□□□ -0.28
TSPAN4-220ENST00000532375 ATRXP46100 2492 aa13.28□□□□□ -0.28
TSPAN4-220ENST00000532375 CCDC189A1A4V9 331 aa13.28□□□□□ -0.28
TSPAN4-220ENST00000532375 UBXN8O00124 270 aa13.28□□□□□ -0.28
TSPAN4-220ENST00000532375 KATNA1O75449 491 aa13.28□□□□□ -0.28
TSPAN4-220ENST00000532375 KRT38O76015 456 aa13.28□□□□□ -0.28
TSPAN4-220ENST00000532375 SHBGP04278 402 aa13.28□□□□□ -0.28
TSPAN4-220ENST00000532375 SNRPAP09012 282 aaKnown RBP13.28□□□□□ -0.28
TSPAN4-220ENST00000532375 SBK3P0C264 359 aa13.28□□□□□ -0.28
TSPAN4-220ENST00000532375 AGXTP21549 392 aa13.28□□□□□ -0.28
TSPAN4-220ENST00000532375 ALAS2P22557 587 aa13.28□□□□□ -0.28
TSPAN4-220ENST00000532375 CNTFP26441 200 aa13.28□□□□□ -0.28
TSPAN4-220ENST00000532375 HSPA7P48741 367 aa13.28□□□□□ -0.28
TSPAN4-220ENST00000532375 CCR8P51685 355 aa13.28□□□□□ -0.28
TSPAN4-220ENST00000532375 FOXL2P58012 376 aa13.28□□□□□ -0.28
TSPAN4-220ENST00000532375 RPS15AP62244 130 aaKnown RBP13.28□□□□□ -0.28
TSPAN4-220ENST00000532375 MEF2AQ02078 507 aaPredicted RBP13.28□□□□□ -0.28
TSPAN4-220ENST00000532375 RHDQ02161 417 aa13.28□□□□□ -0.28
TSPAN4-220ENST00000532375 CDC20Q12834 499 aa13.28□□□□□ -0.28
TSPAN4-220ENST00000532375 IL10RAQ13651 578 aa13.28□□□□□ -0.28
TSPAN4-220ENST00000532375 E2F2Q14209 437 aa13.28□□□□□ -0.28
TSPAN4-220ENST00000532375 ACAP2Q15057 778 aa13.28□□□□□ -0.28
TSPAN4-220ENST00000532375 TBR1Q16650 682 aa13.28□□□□□ -0.28
TSPAN4-220ENST00000532375 SOWAHCQ53LP3 525 aaPredicted RBP13.28□□□□□ -0.28
TSPAN4-220ENST00000532375 NXPE4Q6UWF7 544 aa13.28□□□□□ -0.28
TSPAN4-220ENST00000532375 FRA10AC1Q70Z53 315 aa13.28□□□□□ -0.28
TSPAN4-220ENST00000532375 OVCH1Q7RTY7 1134 aa13.28□□□□□ -0.28
TSPAN4-220ENST00000532375 TCAIMQ8N3R3 496 aa13.28□□□□□ -0.28
TSPAN4-220ENST00000532375 ZSCAN1Q8NBB4 408 aa13.28□□□□□ -0.28
TSPAN4-220ENST00000532375 MFSD9Q8NBP5 474 aa13.28□□□□□ -0.28
TSPAN4-220ENST00000532375 THAP11Q96EK4 314 aa13.28□□□□□ -0.28
TSPAN4-220ENST00000532375 TSNARE1Q96NA8 513 aa13.28□□□□□ -0.28
TSPAN4-220ENST00000532375 MACROD1Q9BQ69 325 aa13.28□□□□□ -0.28
TSPAN4-220ENST00000532375 SLC7A5P2Q9GIP4 190 aa13.28□□□□□ -0.28
TSPAN4-220ENST00000532375 PELI2Q9HAT8 420 aa13.28□□□□□ -0.28
TSPAN4-220ENST00000532375 TXLNGQ9NUQ3 528 aa13.28□□□□□ -0.28
TSPAN4-220ENST00000532375 COPG2Q9UBF2 871 aa13.28□□□□□ -0.28
TSPAN4-220ENST00000532375 TLK1Q9UKI8 766 aa13.28□□□□□ -0.28
TSPAN4-220ENST00000532375 RNF112Q9ULX5 631 aa13.28□□□□□ -0.28
TSPAN4-220ENST00000532375 TRBC2A0A5B9 178 aa13.27□□□□□ -0.29
TSPAN4-220ENST00000532375 PABPN1LA6NDY0 278 aaKnown RBP13.27□□□□□ -0.29
TSPAN4-220ENST00000532375 WDR47O94967 919 aa13.27□□□□□ -0.29
TSPAN4-220ENST00000532375 STATHP02808 62 aa13.27□□□□□ -0.29
TSPAN4-220ENST00000532375 ITGB2P05107 769 aa13.27□□□□□ -0.29
TSPAN4-220ENST00000532375 VARSP26640 1264 aaKnown RBP13.27□□□□□ -0.29
TSPAN4-220ENST00000532375 SCTRP47872 440 aa13.27□□□□□ -0.29
TSPAN4-220ENST00000532375 OR1D4P47884 311 aa13.27□□□□□ -0.29
TSPAN4-220ENST00000532375 GLRBP48167 497 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms