RNA–Protein interactions for RNA: ENST00000532279.1

PPP1CA-207, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-207ENST00000532279 FEZF1A0PJY2 475 aa21.78■■□□□ 1.08
PPP1CA-207ENST00000532279 I3L1I5 382 aaPredicted RBP21.78■■□□□ 1.08
PPP1CA-207ENST00000532279 DPM1O60762 260 aa21.78■■□□□ 1.08
PPP1CA-207ENST00000532279 ANXA5P08758 320 aa21.78■■□□□ 1.08
PPP1CA-207ENST00000532279 ZGLP1P0C6A0 271 aa21.78■■□□□ 1.08
PPP1CA-207ENST00000532279 ZNF37AP17032 561 aaPredicted RBP21.78■■□□□ 1.08
PPP1CA-207ENST00000532279 AP1S2P56377 157 aa21.78■■□□□ 1.08
PPP1CA-207ENST00000532279 RPS15AP62244 130 aaKnown RBP21.78■■□□□ 1.08
PPP1CA-207ENST00000532279 FOXK1P85037 733 aa21.78■■□□□ 1.08
PPP1CA-207ENST00000532279 ZXDCQ2QGD7 858 aaPredicted RBP21.78■■□□□ 1.08
PPP1CA-207ENST00000532279 VWA2Q5GFL6 755 aa21.78■■□□□ 1.08
PPP1CA-207ENST00000532279 VWA5B1Q5TIE3 1220 aa21.78■■□□□ 1.08
PPP1CA-207ENST00000532279 GARNL3Q5VVW2 1013 aa21.78■■□□□ 1.08
PPP1CA-207ENST00000532279 LCTLQ6UWM7 567 aa21.78■■□□□ 1.08
PPP1CA-207ENST00000532279 SMAD5Q99717 465 aaKnown RBP21.78■■□□□ 1.08
PPP1CA-207ENST00000532279 DRC3Q9H069 523 aa21.78■■□□□ 1.08
PPP1CA-207ENST00000532279 ATP13A2Q9NQ11 1180 aa21.78■■□□□ 1.08
PPP1CA-207ENST00000532279 SEMA3GQ9NS98 782 aa21.78■■□□□ 1.08
PPP1CA-207ENST00000532279 LUZP4Q9P127 313 aa21.78■■□□□ 1.08
PPP1CA-207ENST00000532279 TRPC4Q9UBN4 977 aa21.78■■□□□ 1.08
PPP1CA-207ENST00000532279 PLAAQ9Y263 795 aa21.78■■□□□ 1.08
PPP1CA-207ENST00000532279 NPEPPSL1A6NEC2 478 aa21.77■■□□□ 1.08
PPP1CA-207ENST00000532279 TTLL8A6PVC2 850 aa21.77■■□□□ 1.08
PPP1CA-207ENST00000532279 EIF3HO15372 352 aaKnown RBP eCLIP21.77■■□□□ 1.08
PPP1CA-207ENST00000532279 PRPF4O43172 522 aaKnown RBP eCLIP21.77■■□□□ 1.08
PPP1CA-207ENST00000532279 PLTPP55058 493 aa21.77■■□□□ 1.08
PPP1CA-207ENST00000532279 TAS2R39P59534 338 aa21.77■■□□□ 1.08
PPP1CA-207ENST00000532279 CSNK1G2P78368 415 aa21.77■■□□□ 1.08
PPP1CA-207ENST00000532279 CBLBQ13191 982 aa21.77■■□□□ 1.08
PPP1CA-207ENST00000532279 DSG2Q14126 1118 aa21.77■■□□□ 1.08
PPP1CA-207ENST00000532279 KIRREL2Q6UWL6 708 aa21.77■■□□□ 1.08
PPP1CA-207ENST00000532279 SBSNQ6UWP8 590 aa21.77■■□□□ 1.08
PPP1CA-207ENST00000532279 ARHGEF39Q8N4T4 335 aa21.77■■□□□ 1.08
PPP1CA-207ENST00000532279 NACC2Q96BF6 587 aa21.77■■□□□ 1.08
PPP1CA-207ENST00000532279 MVB12AQ96EY5 273 aa21.77■■□□□ 1.08
PPP1CA-207ENST00000532279 VPS39Q96JC1 886 aa21.77■■□□□ 1.08
PPP1CA-207ENST00000532279 MACROD1Q9BQ69 325 aa21.77■■□□□ 1.08
PPP1CA-207ENST00000532279 MESP1Q9BRJ9 268 aa21.77■■□□□ 1.08
PPP1CA-207ENST00000532279 RAB17Q9H0T7 212 aa21.77■■□□□ 1.08
PPP1CA-207ENST00000532279 RHOJQ9H4E5 214 aa21.77■■□□□ 1.08
PPP1CA-207ENST00000532279 C3orf18Q9UK00 162 aa21.77■■□□□ 1.08
PPP1CA-207ENST00000532279 MRPS2Q9Y399 296 aaKnown RBP21.77■■□□□ 1.08
PPP1CA-207ENST00000532279 CXorf49A8MYA2 514 aaPredicted RBP21.76■■□□□ 1.07
PPP1CA-207ENST00000532279 CDC7O00311 574 aa21.76■■□□□ 1.07
PPP1CA-207ENST00000532279 FOXS1O43638 330 aa21.76■■□□□ 1.07
PPP1CA-207ENST00000532279 ENO2P09104 434 aaPredicted RBP21.76■■□□□ 1.07
PPP1CA-207ENST00000532279 NPPBP16860 134 aa21.76■■□□□ 1.07
PPP1CA-207ENST00000532279 ITGA3P26006 1051 aa21.76■■□□□ 1.07
PPP1CA-207ENST00000532279 SNRPNP63162 240 aaKnown RBP21.76■■□□□ 1.07
PPP1CA-207ENST00000532279 AIMP2Q13155 320 aaKnown RBP21.76■■□□□ 1.07
PPP1CA-207ENST00000532279 MYBPC3Q14896 1274 aa21.76■■□□□ 1.07
PPP1CA-207ENST00000532279 NDUFA9Q16795 377 aa21.76■■□□□ 1.07
PPP1CA-207ENST00000532279 TUBB8Q3ZCM7 444 aa21.76■■□□□ 1.07
PPP1CA-207ENST00000532279 VN1R4Q7Z5H5 301 aa21.76■■□□□ 1.07
PPP1CA-207ENST00000532279 LAPTM4BQ86VI4 370 aa21.76■■□□□ 1.07
PPP1CA-207ENST00000532279 CCDC25Q86WR0 208 aa21.76■■□□□ 1.07
PPP1CA-207ENST00000532279 CEP97Q8IW35 865 aa21.76■■□□□ 1.07
PPP1CA-207ENST00000532279 NKAPQ8N5F7 415 aaKnown RBP21.76■■□□□ 1.07
PPP1CA-207ENST00000532279 AMER3Q8N944 861 aa21.76■■□□□ 1.07
PPP1CA-207ENST00000532279 OR56A3Q8NH54 315 aa21.76■■□□□ 1.07
PPP1CA-207ENST00000532279 CDKL2Q92772 493 aa21.76■■□□□ 1.07
PPP1CA-207ENST00000532279 FBXL8Q96CD0 374 aa21.76■■□□□ 1.07
PPP1CA-207ENST00000532279 PDLIM5Q96HC4 596 aaKnown RBP21.76■■□□□ 1.07
PPP1CA-207ENST00000532279 C16orf45Q96MC5 204 aaPredicted RBP21.76■■□□□ 1.07
PPP1CA-207ENST00000532279 HAUS8Q9BT25 410 aa21.76■■□□□ 1.07
PPP1CA-207ENST00000532279 IGLV3-12A0A075B6K2 115 aa21.75■■□□□ 1.07
PPP1CA-207ENST00000532279 ALPPP05187 535 aa21.75■■□□□ 1.07
PPP1CA-207ENST00000532279 GRK3P35626 688 aa21.75■■□□□ 1.07
PPP1CA-207ENST00000532279 SLC26A3P40879 764 aa21.75■■□□□ 1.07
PPP1CA-207ENST00000532279 BCL6P41182 706 aa21.75■■□□□ 1.07
PPP1CA-207ENST00000532279 SLC12A2P55011 1212 aa21.75■■□□□ 1.07
PPP1CA-207ENST00000532279 MEF2AQ02078 507 aaPredicted RBP21.75■■□□□ 1.07
PPP1CA-207ENST00000532279 TRADDQ15628 312 aa21.75■■□□□ 1.07
PPP1CA-207ENST00000532279 SYT16Q17RD7 645 aa21.75■■□□□ 1.07
PPP1CA-207ENST00000532279 JMJD6Q6NYC1 403 aaPredicted RBP21.75■■□□□ 1.07
PPP1CA-207ENST00000532279 RBMXL3Q8N7X1 1067 aaKnown RBP21.75■■□□□ 1.07
PPP1CA-207ENST00000532279 OR11G2Q8NGC1 345 aa21.75■■□□□ 1.07
PPP1CA-207ENST00000532279 FBXO25Q8TCJ0 367 aa21.75■■□□□ 1.07
PPP1CA-207ENST00000532279 ATL1Q8WXF7 558 aa21.75■■□□□ 1.07
PPP1CA-207ENST00000532279 OR4K3Q96R72 315 aa21.75■■□□□ 1.07
PPP1CA-207ENST00000532279 ZNF552Q9H707 407 aaPredicted RBP21.75■■□□□ 1.07
PPP1CA-207ENST00000532279 GPAMQ9HCL2 828 aa21.75■■□□□ 1.07
PPP1CA-207ENST00000532279 TXNDC16Q9P2K2 825 aa21.75■■□□□ 1.07
PPP1CA-207ENST00000532279 MTO1Q9Y2Z2 717 aaKnown RBP21.75■■□□□ 1.07
PPP1CA-207ENST00000532279 KCNE1BA0A087WTH5 132 aa21.74■■□□□ 1.07
PPP1CA-207ENST00000532279 TCRBV9S1A1TA0A576 114 aa21.74■■□□□ 1.07
PPP1CA-207ENST00000532279 LCMT2O60294 686 aaKnown RBP21.74■■□□□ 1.07
PPP1CA-207ENST00000532279 AVPR1BP47901 424 aa21.74■■□□□ 1.07
PPP1CA-207ENST00000532279 MAT1AQ00266 395 aaKnown RBP21.74■■□□□ 1.07
PPP1CA-207ENST00000532279 CKAP4Q07065 602 aaKnown RBP21.74■■□□□ 1.07
PPP1CA-207ENST00000532279 FAM53BQ14153 422 aa21.74■■□□□ 1.07
PPP1CA-207ENST00000532279 FAAH2Q6GMR7 532 aa21.74■■□□□ 1.07
PPP1CA-207ENST00000532279 C3orf62Q6ZUJ4 267 aa21.74■■□□□ 1.07
PPP1CA-207ENST00000532279 PRSS41Q7RTY9 318 aa21.74■■□□□ 1.07
PPP1CA-207ENST00000532279 ZNF572Q7Z3I7 529 aaPredicted RBP21.74■■□□□ 1.07
PPP1CA-207ENST00000532279 HPS6Q86YV9 775 aa21.74■■□□□ 1.07
PPP1CA-207ENST00000532279 PARP9Q8IXQ6 854 aa21.74■■□□□ 1.07
PPP1CA-207ENST00000532279 OR9A4Q8NGU2 314 aa21.74■■□□□ 1.07
PPP1CA-207ENST00000532279 ZCCHC10Q8TBK6 192 aa21.74■■□□□ 1.07
PPP1CA-207ENST00000532279 ANKRD49Q8WVL7 239 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms