RNA–Protein interactions for RNA: ENST00000532160.1

VPS26B-207, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-207ENST00000532160 UBE2R2Q712K3 238 aaPredicted RBP9.04□□□□□ -0.96
VPS26B-207ENST00000532160 TRABD2AQ86V40 505 aa9.04□□□□□ -0.96
VPS26B-207ENST00000532160 PARP9Q8IXQ6 854 aa9.04□□□□□ -0.96
VPS26B-207ENST00000532160 RBM12BQ8IXT5 1001 aaKnown RBP9.04□□□□□ -0.96
VPS26B-207ENST00000532160 CENPLQ8N0S6 344 aaPredicted RBP9.04□□□□□ -0.96
VPS26B-207ENST00000532160 C4orf33Q8N1A6 199 aa9.04□□□□□ -0.96
VPS26B-207ENST00000532160 NKAPQ8N5F7 415 aaKnown RBP9.04□□□□□ -0.96
VPS26B-207ENST00000532160 C2orf73Q8N5S3 287 aaPredicted RBP9.04□□□□□ -0.96
VPS26B-207ENST00000532160 CCDC63Q8NA47 563 aa9.04□□□□□ -0.96
VPS26B-207ENST00000532160 OR52E1Q8NGJ3 308 aa9.04□□□□□ -0.96
VPS26B-207ENST00000532160 DLG3Q92796 817 aa9.04□□□□□ -0.96
VPS26B-207ENST00000532160 EXT2Q93063 718 aa9.04□□□□□ -0.96
VPS26B-207ENST00000532160 PTERQ96BW5 349 aa9.04□□□□□ -0.96
VPS26B-207ENST00000532160 MAP3K3Q99759 626 aa9.04□□□□□ -0.96
VPS26B-207ENST00000532160 PITPNM3Q9BZ71 974 aa9.04□□□□□ -0.96
VPS26B-207ENST00000532160 RAB33BQ9H082 229 aa9.04□□□□□ -0.96
VPS26B-207ENST00000532160 POPDC3Q9HBV1 291 aa9.04□□□□□ -0.96
VPS26B-207ENST00000532160 PDE7BQ9NP56 450 aa9.04□□□□□ -0.96
VPS26B-207ENST00000532160 IGSF5Q9NSI5 407 aa9.04□□□□□ -0.96
VPS26B-207ENST00000532160 UTP6Q9NYH9 597 aaKnown RBP9.04□□□□□ -0.96
VPS26B-207ENST00000532160 KLHL42Q9P2K6 505 aa9.04□□□□□ -0.96
VPS26B-207ENST00000532160 RARRES3Q9UL19 164 aa9.04□□□□□ -0.96
VPS26B-207ENST00000532160 ACOT9Q9Y305 439 aa9.04□□□□□ -0.96
VPS26B-207ENST00000532160 USH1CQ9Y6N9 552 aa9.04□□□□□ -0.96
VPS26B-207ENST00000532160 ITPR2Q14571 2701 aa9.04□□□□□ -0.96
VPS26B-207ENST00000532160 MYO9AB2RTY4 2548 aa9.03□□□□□ -0.96
VPS26B-207ENST00000532160 TCP11X1B4DZS4 312 aa9.03□□□□□ -0.96
VPS26B-207ENST00000532160 C21orf140B9A014 251 aa9.03□□□□□ -0.96
VPS26B-207ENST00000532160 MGRN1O60291 552 aa9.03□□□□□ -0.96
VPS26B-207ENST00000532160 PSIP1O75475 530 aaKnown RBP9.03□□□□□ -0.96
VPS26B-207ENST00000532160 MATN4O95460 622 aa9.03□□□□□ -0.96
VPS26B-207ENST00000532160 MT-ND3P03897 115 aa9.03□□□□□ -0.96
VPS26B-207ENST00000532160 CBSLP0DN79 551 aa9.03□□□□□ -0.96
VPS26B-207ENST00000532160 TROVE2P10155 538 aaKnown RBP eCLIP9.03□□□□□ -0.96
VPS26B-207ENST00000532160 CREB1P16220 341 aa9.03□□□□□ -0.96
VPS26B-207ENST00000532160 TFEBP19484 476 aa9.03□□□□□ -0.96
VPS26B-207ENST00000532160 PTPN4P29074 926 aa9.03□□□□□ -0.96
VPS26B-207ENST00000532160 CRABP2P29373 138 aa9.03□□□□□ -0.96
VPS26B-207ENST00000532160 CBSP35520 551 aa9.03□□□□□ -0.96
VPS26B-207ENST00000532160 GRB7Q14451 532 aa9.03□□□□□ -0.96
VPS26B-207ENST00000532160 PLCL1Q15111 1095 aa9.03□□□□□ -0.96
VPS26B-207ENST00000532160 OR4D1Q15615 310 aa9.03□□□□□ -0.96
VPS26B-207ENST00000532160 PDK4Q16654 411 aa9.03□□□□□ -0.96
VPS26B-207ENST00000532160 PHKG1Q16816 387 aa9.03□□□□□ -0.96
VPS26B-207ENST00000532160 GALNTL6Q49A17 601 aa9.03□□□□□ -0.96
VPS26B-207ENST00000532160 HHATQ5VTY9 493 aa9.03□□□□□ -0.96
VPS26B-207ENST00000532160 UNC5DQ6UXZ4 953 aa9.03□□□□□ -0.96
VPS26B-207ENST00000532160 TIFABQ6ZNK6 161 aa9.03□□□□□ -0.96
VPS26B-207ENST00000532160 TBC1D1Q86TI0 1168 aaPredicted RBP9.03□□□□□ -0.96
VPS26B-207ENST00000532160 ATCAYQ86WG3 371 aa9.03□□□□□ -0.96
VPS26B-207ENST00000532160 APLFQ8IW19 511 aaPredicted RBP9.03□□□□□ -0.96
VPS26B-207ENST00000532160 OR4E2Q8NGC2 313 aa9.03□□□□□ -0.96
VPS26B-207ENST00000532160 OR5K2Q8NHB8 316 aa9.03□□□□□ -0.96
VPS26B-207ENST00000532160 LRRC8CQ8TDW0 803 aa9.03□□□□□ -0.96
VPS26B-207ENST00000532160 ASB11Q8WXH4 323 aa9.03□□□□□ -0.96
VPS26B-207ENST00000532160 ISL2Q96A47 359 aa9.03□□□□□ -0.96
VPS26B-207ENST00000532160 MTBPQ96DY7 904 aa9.03□□□□□ -0.96
VPS26B-207ENST00000532160 PPM1MQ96MI6 270 aa9.03□□□□□ -0.96
VPS26B-207ENST00000532160 FOPNLQ96NB1 174 aa9.03□□□□□ -0.96
VPS26B-207ENST00000532160 C12orf65Q9H3J6 166 aaKnown RBP9.03□□□□□ -0.96
VPS26B-207ENST00000532160 RABEP2Q9H5N1 569 aa9.03□□□□□ -0.96
VPS26B-207ENST00000532160 ABCF3Q9NUQ8 709 aa9.03□□□□□ -0.96
VPS26B-207ENST00000532160 PDE10AQ9Y233 779 aa9.03□□□□□ -0.96
VPS26B-207ENST00000532160 CACNA1DQ01668 2161 aa9.03□□□□□ -0.96
VPS26B-207ENST00000532160 FER1L5A0AVI2 2057 aa9.03□□□□□ -0.96
VPS26B-207ENST00000532160 CCDC88CQ9P219 2028 aa9.02□□□□□ -0.97
VPS26B-207ENST00000532160 A0A087X1B8 175 aa9.02□□□□□ -0.97
VPS26B-207ENST00000532160 OR5K3A6NET4 321 aa9.02□□□□□ -0.97
VPS26B-207ENST00000532160 TLCD2A6NGC4 264 aa9.02□□□□□ -0.97
VPS26B-207ENST00000532160 NCF1BA6NI72 391 aaPredicted RBP9.02□□□□□ -0.97
VPS26B-207ENST00000532160 TTLL8A6PVC2 850 aa9.02□□□□□ -0.97
VPS26B-207ENST00000532160 NCF1CA8MVU1 366 aaPredicted RBP9.02□□□□□ -0.97
VPS26B-207ENST00000532160 GFYI3L273 518 aa9.02□□□□□ -0.97
VPS26B-207ENST00000532160 EIF3FO00303 357 aaPredicted RBP9.02□□□□□ -0.97
VPS26B-207ENST00000532160 TGDSO95455 350 aa9.02□□□□□ -0.97
VPS26B-207ENST00000532160 GUCA1CO95843 209 aa9.02□□□□□ -0.97
VPS26B-207ENST00000532160 RECKO95980 971 aa9.02□□□□□ -0.97
VPS26B-207ENST00000532160 CATP04040 527 aaKnown RBP9.02□□□□□ -0.97
VPS26B-207ENST00000532160 LTA4HP09960 611 aaKnown RBP9.02□□□□□ -0.97
VPS26B-207ENST00000532160 RNF224P0DH78 156 aa9.02□□□□□ -0.97
VPS26B-207ENST00000532160 NCF1P14598 390 aaPredicted RBP9.02□□□□□ -0.97
VPS26B-207ENST00000532160 GNLYP22749 145 aa9.02□□□□□ -0.97
VPS26B-207ENST00000532160 KCNC1P48547 511 aa9.02□□□□□ -0.97
VPS26B-207ENST00000532160 GTF2A1P52655 376 aaPredicted RBP9.02□□□□□ -0.97
VPS26B-207ENST00000532160 ILF2Q12905 390 aaKnown RBP9.02□□□□□ -0.97
VPS26B-207ENST00000532160 BNIP1Q12981 228 aa9.02□□□□□ -0.97
VPS26B-207ENST00000532160 TSTA3Q13630 321 aaPredicted RBP9.02□□□□□ -0.97
VPS26B-207ENST00000532160 GPR19Q15760 415 aa9.02□□□□□ -0.97
VPS26B-207ENST00000532160 UGT8Q16880 541 aa9.02□□□□□ -0.97
VPS26B-207ENST00000532160 NADK2Q4G0N4 442 aa9.02□□□□□ -0.97
VPS26B-207ENST00000532160 FBXO48Q5FWF7 155 aa9.02□□□□□ -0.97
VPS26B-207ENST00000532160 PRAMEF17Q5VTA0 474 aa9.02□□□□□ -0.97
VPS26B-207ENST00000532160 FAM69BQ5VUD6 431 aa9.02□□□□□ -0.97
VPS26B-207ENST00000532160 LCN10Q6JVE6 187 aa9.02□□□□□ -0.97
VPS26B-207ENST00000532160 CYB5D1Q6P9G0 228 aa9.02□□□□□ -0.97
VPS26B-207ENST00000532160 SBSNQ6UWP8 590 aa9.02□□□□□ -0.97
VPS26B-207ENST00000532160 CDHR3Q6ZTQ4 885 aa9.02□□□□□ -0.97
VPS26B-207ENST00000532160 NEK10Q6ZWH5 1172 aa9.02□□□□□ -0.97
VPS26B-207ENST00000532160 DCUN1D3Q8IWE4 304 aa9.02□□□□□ -0.97
VPS26B-207ENST00000532160 SRRM1Q8IYB3 904 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms