RNA–Protein interactions for RNA: ENST00000531550.1

SCN4B-205, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 1,206 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-205ENST00000531550 FBF1Q8TES7 1133 aa17.21■□□□□ 0.35
SCN4B-205ENST00000531550 CRB3Q9BUF7 120 aa17.21■□□□□ 0.35
SCN4B-205ENST00000531550 TRIM8Q9BZR9 551 aa17.21■□□□□ 0.35
SCN4B-205ENST00000531550 SLC2A6Q9UGQ3 507 aa17.21■□□□□ 0.35
SCN4B-205ENST00000531550 ITGB1BP2Q9UKP3 347 aa17.21■□□□□ 0.35
SCN4B-205ENST00000531550 DCHS2Q6V1P9 2916 aa17.2■□□□□ 0.34
SCN4B-205ENST00000531550 TRAV17A0A0B4J275 112 aa17.2■□□□□ 0.34
SCN4B-205ENST00000531550 DYTNA2CJ06 578 aa17.2■□□□□ 0.34
SCN4B-205ENST00000531550 QSOX1O00391 747 aa17.2■□□□□ 0.34
SCN4B-205ENST00000531550 CCL21O00585 134 aa17.2■□□□□ 0.34
SCN4B-205ENST00000531550 MAP2K7O14733 419 aa17.2■□□□□ 0.34
SCN4B-205ENST00000531550 C1QAP02745 245 aa17.2■□□□□ 0.34
SCN4B-205ENST00000531550 ACPPP15309 386 aa17.2■□□□□ 0.34
SCN4B-205ENST00000531550 SOX11P35716 441 aa17.2■□□□□ 0.34
SCN4B-205ENST00000531550 NSG1P42857 185 aa17.2■□□□□ 0.34
SCN4B-205ENST00000531550 TNFSF10P50591 281 aa17.2■□□□□ 0.34
SCN4B-205ENST00000531550 RAB28P51157 221 aa17.2■□□□□ 0.34
SCN4B-205ENST00000531550 EIF3BP55884 814 aaKnown RBP17.2■□□□□ 0.34
SCN4B-205ENST00000531550 LONRF1Q17RB8 773 aa17.2■□□□□ 0.34
SCN4B-205ENST00000531550 TCTE1Q5JU00 501 aa17.2■□□□□ 0.34
SCN4B-205ENST00000531550 LRIG3Q6UXM1 1119 aa17.2■□□□□ 0.34
SCN4B-205ENST00000531550 PACS1Q6VY07 963 aa17.2■□□□□ 0.34
SCN4B-205ENST00000531550 CAPN12Q6ZSI9 719 aa17.2■□□□□ 0.34
SCN4B-205ENST00000531550 DTWD1Q8N5C7 304 aa17.2■□□□□ 0.34
SCN4B-205ENST00000531550 LMNTD1Q8N9Z9 388 aa17.2■□□□□ 0.34
SCN4B-205ENST00000531550 TTC29Q8NA56 475 aaPredicted RBP17.2■□□□□ 0.34
SCN4B-205ENST00000531550 CERS2Q96G23 380 aa17.2■□□□□ 0.34
SCN4B-205ENST00000531550 CDKN2AIPNLQ96HQ2 116 aa17.2■□□□□ 0.34
SCN4B-205ENST00000531550 ZNF285Q96NJ3 590 aa17.2■□□□□ 0.34
SCN4B-205ENST00000531550 CYTH2Q99418 400 aa17.2■□□□□ 0.34
SCN4B-205ENST00000531550 CCDC77Q9BR77 488 aa17.2■□□□□ 0.34
SCN4B-205ENST00000531550 MENTQ9BUN1 341 aa17.2■□□□□ 0.34
SCN4B-205ENST00000531550 ACSS3Q9H6R3 686 aa17.2■□□□□ 0.34
SCN4B-205ENST00000531550 ENAMQ9NRM1 1142 aa17.2■□□□□ 0.34
SCN4B-205ENST00000531550 PLA2G3Q9NZ20 509 aa17.2■□□□□ 0.34
SCN4B-205ENST00000531550 FETUBQ9UGM5 382 aa17.2■□□□□ 0.34
SCN4B-205ENST00000531550 NFS1Q9Y697 457 aa17.2■□□□□ 0.34
SCN4B-205ENST00000531550 MAU2Q9Y6X3 613 aa17.2■□□□□ 0.34
SCN4B-205ENST00000531550 FAM159BA6NKW6 160 aa17.19■□□□□ 0.34
SCN4B-205ENST00000531550 GRIA3P42263 894 aa17.19■□□□□ 0.34
SCN4B-205ENST00000531550 CA7P43166 264 aa17.19■□□□□ 0.34
SCN4B-205ENST00000531550 KLC1Q07866 573 aa17.19■□□□□ 0.34
SCN4B-205ENST00000531550 MGAT5Q09328 741 aa17.19■□□□□ 0.34
SCN4B-205ENST00000531550 ITIH4Q14624 930 aa17.19■□□□□ 0.34
SCN4B-205ENST00000531550 VWA2Q5GFL6 755 aa17.19■□□□□ 0.34
SCN4B-205ENST00000531550 ZC3H12BQ5HYM0 836 aaKnown RBP17.19■□□□□ 0.34
SCN4B-205ENST00000531550 MTFR2Q6P444 385 aa17.19■□□□□ 0.34
SCN4B-205ENST00000531550 TRMT10BQ6PF06 316 aaKnown RBP17.19■□□□□ 0.34
SCN4B-205ENST00000531550 MYO7BQ6PIF6 2116 aa17.19■□□□□ 0.34
SCN4B-205ENST00000531550 TMEM207Q6UWW9 146 aa17.19■□□□□ 0.34
SCN4B-205ENST00000531550 RPTNQ6XPR3 784 aa17.19■□□□□ 0.34
SCN4B-205ENST00000531550 TAX1BP1Q86VP1 789 aa17.19■□□□□ 0.34
SCN4B-205ENST00000531550 KBTBD2Q8IY47 623 aa17.19■□□□□ 0.34
SCN4B-205ENST00000531550 C2orf73Q8N5S3 287 aaPredicted RBP17.19■□□□□ 0.34
SCN4B-205ENST00000531550 C8orf44Q96CB5 159 aa17.19■□□□□ 0.34
SCN4B-205ENST00000531550 TMEM109Q9BVC6 243 aa17.19■□□□□ 0.34
SCN4B-205ENST00000531550 ROPN1BQ9BZX4 212 aaPredicted RBP17.19■□□□□ 0.34
SCN4B-205ENST00000531550 ROPN1Q9HAT0 212 aaPredicted RBP17.19■□□□□ 0.34
SCN4B-205ENST00000531550 INTS7Q9NVH2 962 aaKnown RBP17.19■□□□□ 0.34
SCN4B-205ENST00000531550 ZNF446Q9NWS9 450 aa17.19■□□□□ 0.34
SCN4B-205ENST00000531550 IL1RAPL1Q9NZN1 696 aa17.19■□□□□ 0.34
SCN4B-205ENST00000531550 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.19■□□□□ 0.34
SCN4B-205ENST00000531550 PTGFRNQ9P2B2 879 aa17.19■□□□□ 0.34
SCN4B-205ENST00000531550 CNTRLQ7Z7A1 2325 aa17.18■□□□□ 0.34
SCN4B-205ENST00000531550 FITM1A5D6W6 292 aa17.18■□□□□ 0.34
SCN4B-205ENST00000531550 UNC5CO95185 931 aa17.18■□□□□ 0.34
SCN4B-205ENST00000531550 VAPBO95292 243 aa17.18■□□□□ 0.34
SCN4B-205ENST00000531550 MED26O95402 600 aa17.18■□□□□ 0.34
SCN4B-205ENST00000531550 ARNTP27540 789 aa17.18■□□□□ 0.34
SCN4B-205ENST00000531550 PRAMEP78395 509 aa17.18■□□□□ 0.34
SCN4B-205ENST00000531550 PLOD1Q02809 727 aaPredicted RBP17.18■□□□□ 0.34
SCN4B-205ENST00000531550 NAB1Q13506 487 aa17.18■□□□□ 0.34
SCN4B-205ENST00000531550 KLHL38Q2WGJ6 581 aa17.18■□□□□ 0.34
SCN4B-205ENST00000531550 FIGLAQ6QHK4 219 aa17.18■□□□□ 0.34
SCN4B-205ENST00000531550 LMNTD2Q8IXW0 634 aa17.18■□□□□ 0.34
SCN4B-205ENST00000531550 PRSS58Q8IYP2 241 aa17.18■□□□□ 0.34
SCN4B-205ENST00000531550 UHMK1Q8TAS1 419 aaKnown RBP17.18■□□□□ 0.34
SCN4B-205ENST00000531550 STT3BQ8TCJ2 826 aa17.18■□□□□ 0.34
SCN4B-205ENST00000531550 BRIX1Q8TDN6 353 aaKnown RBP17.18■□□□□ 0.34
SCN4B-205ENST00000531550 PSMF1Q92530 271 aa17.18■□□□□ 0.34
SCN4B-205ENST00000531550 CDKL2Q92772 493 aa17.18■□□□□ 0.34
SCN4B-205ENST00000531550 HDAC10Q969S8 669 aa17.18■□□□□ 0.34
SCN4B-205ENST00000531550 SLC22A18Q96BI1 424 aa17.18■□□□□ 0.34
SCN4B-205ENST00000531550 ZIM3Q96PE6 472 aa17.18■□□□□ 0.34
SCN4B-205ENST00000531550 SELENOSQ9BQE4 189 aa17.18■□□□□ 0.34
SCN4B-205ENST00000531550 PPCSQ9HAB8 311 aa17.18■□□□□ 0.34
SCN4B-205ENST00000531550 C20orf96Q9NUD7 363 aaPredicted RBP17.18■□□□□ 0.34
SCN4B-205ENST00000531550 ABI3Q9P2A4 366 aa17.18■□□□□ 0.34
SCN4B-205ENST00000531550 CIDEBQ9UHD4 219 aa17.18■□□□□ 0.34
SCN4B-205ENST00000531550 HIVEP1P15822 2718 aa17.17■□□□□ 0.34
SCN4B-205ENST00000531550 S1PR4O95977 384 aa17.17■□□□□ 0.34
SCN4B-205ENST00000531550 ZGLP1P0C6A0 271 aa17.17■□□□□ 0.34
SCN4B-205ENST00000531550 PRR35P0CG20 571 aa17.17■□□□□ 0.34
SCN4B-205ENST00000531550 COX6A1P12074 109 aa17.17■□□□□ 0.34
SCN4B-205ENST00000531550 FDXRP22570 491 aa17.17■□□□□ 0.34
SCN4B-205ENST00000531550 MST1P26927 711 aa17.17■□□□□ 0.34
SCN4B-205ENST00000531550 FAM214AQ32MH5 1076 aa17.17■□□□□ 0.34
SCN4B-205ENST00000531550 KBTBD12Q3ZCT8 623 aa17.17■□□□□ 0.34
SCN4B-205ENST00000531550 ATG9BQ674R7 924 aa17.17■□□□□ 0.34
SCN4B-205ENST00000531550 CROCCP2Q86T23 111 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms