RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 PKMP14618 531 aaKnown RBP8.73□□□□□ -1.01
NEDD8-206ENST00000531430 CHRM3P20309 590 aa8.73□□□□□ -1.01
NEDD8-206ENST00000531430 CTNNA1P35221 906 aaKnown RBP8.73□□□□□ -1.01
NEDD8-206ENST00000531430 CCNFP41002 786 aa8.73□□□□□ -1.01
NEDD8-206ENST00000531430 GRIA1P42261 906 aa8.73□□□□□ -1.01
NEDD8-206ENST00000531430 GDF10P55107 478 aa8.73□□□□□ -1.01
NEDD8-206ENST00000531430 NAA25Q14CX7 972 aa8.73□□□□□ -1.01
NEDD8-206ENST00000531430 ANKRD20A4Q4UJ75 823 aa8.73□□□□□ -1.01
NEDD8-206ENST00000531430 AARS2Q5JTZ9 985 aaKnown RBP8.73□□□□□ -1.01
NEDD8-206ENST00000531430 C11orf63Q6NUN7 778 aa8.73□□□□□ -1.01
NEDD8-206ENST00000531430 ZNF534Q76KX8 674 aa8.73□□□□□ -1.01
NEDD8-206ENST00000531430 ZC3H7AQ8IWR0 971 aaKnown RBP8.73□□□□□ -1.01
NEDD8-206ENST00000531430 CYP4X1Q8N118 509 aa8.73□□□□□ -1.01
NEDD8-206ENST00000531430 EID3Q8N140 333 aa8.73□□□□□ -1.01
NEDD8-206ENST00000531430 GHDCQ8N2G8 530 aa8.73□□□□□ -1.01
NEDD8-206ENST00000531430 PPFIBP2Q8ND30 876 aa8.73□□□□□ -1.01
NEDD8-206ENST00000531430 OR9A1PQ8NGU1 263 aa8.73□□□□□ -1.01
NEDD8-206ENST00000531430 OR51Q1Q8NH59 317 aa8.73□□□□□ -1.01
NEDD8-206ENST00000531430 MCOLN3Q8TDD5 553 aa8.73□□□□□ -1.01
NEDD8-206ENST00000531430 SMPDL3AQ92484 453 aa8.73□□□□□ -1.01
NEDD8-206ENST00000531430 NRGNQ92686 78 aa8.73□□□□□ -1.01
NEDD8-206ENST00000531430 MVB12AQ96EY5 273 aa8.73□□□□□ -1.01
NEDD8-206ENST00000531430 MACROD1Q9BQ69 325 aa8.73□□□□□ -1.01
NEDD8-206ENST00000531430 ZNF559Q9BR84 538 aa8.73□□□□□ -1.01
NEDD8-206ENST00000531430 PLCD4Q9BRC7 762 aa8.73□□□□□ -1.01
NEDD8-206ENST00000531430 TGIF2Q9GZN2 237 aa8.73□□□□□ -1.01
NEDD8-206ENST00000531430 ENKD1Q9H0I2 346 aa8.73□□□□□ -1.01
NEDD8-206ENST00000531430 ETNK1Q9HBU6 452 aa8.73□□□□□ -1.01
NEDD8-206ENST00000531430 LRFN1Q9P244 771 aa8.73□□□□□ -1.01
NEDD8-206ENST00000531430 TAC3Q9UHF0 121 aa8.73□□□□□ -1.01
NEDD8-206ENST00000531430 GNPTGQ9UJJ9 305 aa8.73□□□□□ -1.01
NEDD8-206ENST00000531430 EFR3BQ9Y2G0 817 aa8.73□□□□□ -1.01
NEDD8-206ENST00000531430 SCN2AQ99250 2005 aa8.73□□□□□ -1.01
NEDD8-206ENST00000531430 SCN3AQ9NY46 2000 aa8.72□□□□□ -1.01
NEDD8-206ENST00000531430 USP27XA6NNY8 438 aa8.72□□□□□ -1.01
NEDD8-206ENST00000531430 GABRR3A8MPY1 467 aa8.72□□□□□ -1.01
NEDD8-206ENST00000531430 E9PLN8 166 aa8.72□□□□□ -1.01
NEDD8-206ENST00000531430 H7BY64 318 aa8.72□□□□□ -1.01
NEDD8-206ENST00000531430 SGK494L7N484 410 aa8.72□□□□□ -1.01
NEDD8-206ENST00000531430 MAN1A2O60476 641 aa8.72□□□□□ -1.01
NEDD8-206ENST00000531430 CDC123O75794 336 aaPredicted RBP8.72□□□□□ -1.01
NEDD8-206ENST00000531430 IFNB1P01574 187 aa8.72□□□□□ -1.01
NEDD8-206ENST00000531430 PTGS2P35354 604 aa8.72□□□□□ -1.01
NEDD8-206ENST00000531430 RFC3P40938 356 aa8.72□□□□□ -1.01
NEDD8-206ENST00000531430 TTPAP49638 278 aa8.72□□□□□ -1.01
NEDD8-206ENST00000531430 EFNA3P52797 238 aa8.72□□□□□ -1.01
NEDD8-206ENST00000531430 EMP3P54852 163 aa8.72□□□□□ -1.01
NEDD8-206ENST00000531430 HADHBP55084 474 aaKnown RBP8.72□□□□□ -1.01
NEDD8-206ENST00000531430 SESN2P58004 480 aaPredicted RBP8.72□□□□□ -1.01
NEDD8-206ENST00000531430 TAS2R50P59544 299 aa8.72□□□□□ -1.01
NEDD8-206ENST00000531430 MYBPHQ13203 477 aa8.72□□□□□ -1.01
NEDD8-206ENST00000531430 KRTAP21-3Q3LHN1 58 aa8.72□□□□□ -1.01
NEDD8-206ENST00000531430 GARNL3Q5VVW2 1013 aa8.72□□□□□ -1.01
NEDD8-206ENST00000531430 CES4AQ5XG92 561 aa8.72□□□□□ -1.01
NEDD8-206ENST00000531430 PLAG1Q6DJT9 500 aa8.72□□□□□ -1.01
NEDD8-206ENST00000531430 Q6ZPB1 254 aaPredicted RBP8.72□□□□□ -1.01
NEDD8-206ENST00000531430 ANKRD37Q7Z713 158 aa8.72□□□□□ -1.01
NEDD8-206ENST00000531430 PAQR7Q86WK9 346 aa8.72□□□□□ -1.01
NEDD8-206ENST00000531430 CNGA4Q8IV77 575 aa8.72□□□□□ -1.01
NEDD8-206ENST00000531430 VSTM4Q8IW00 320 aa8.72□□□□□ -1.01
NEDD8-206ENST00000531430 SHISA5Q8N114 240 aa8.72□□□□□ -1.01
NEDD8-206ENST00000531430 SLC5A8Q8N695 610 aa8.72□□□□□ -1.01
NEDD8-206ENST00000531430 PPHLN1Q8NEY8 458 aaKnown RBP8.72□□□□□ -1.01
NEDD8-206ENST00000531430 ALKBH8Q96BT7 664 aaKnown RBP8.72□□□□□ -1.01
NEDD8-206ENST00000531430 PRAP1Q96NZ9 151 aa8.72□□□□□ -1.01
NEDD8-206ENST00000531430 OR2A5Q96R48 311 aa8.72□□□□□ -1.01
NEDD8-206ENST00000531430 VKORC1Q9BQB6 163 aa8.72□□□□□ -1.01
NEDD8-206ENST00000531430 VN1R1Q9GZP7 353 aa8.72□□□□□ -1.01
NEDD8-206ENST00000531430 SYNPO2LQ9H987 977 aa8.72□□□□□ -1.01
NEDD8-206ENST00000531430 CHRAC1Q9NRG0 131 aa8.72□□□□□ -1.01
NEDD8-206ENST00000531430 SPATA7Q9P0W8 599 aa8.72□□□□□ -1.01
NEDD8-206ENST00000531430 MARCH4Q9P2E8 410 aaPredicted RBP8.72□□□□□ -1.01
NEDD8-206ENST00000531430 PRRC2AP48634 2157 aaKnown RBP8.71□□□□□ -1.01
NEDD8-206ENST00000531430 A0A1B0GTH9 108 aa8.71□□□□□ -1.02
NEDD8-206ENST00000531430 GOLGA8KD6RF30 607 aa8.71□□□□□ -1.02
NEDD8-206ENST00000531430 GOLGA8TH3BQL2 631 aa8.71□□□□□ -1.02
NEDD8-206ENST00000531430 HAT1O14929 419 aa8.71□□□□□ -1.02
NEDD8-206ENST00000531430 TFECO14948 347 aaPredicted RBP8.71□□□□□ -1.02
NEDD8-206ENST00000531430 P2RX6O15547 441 aa8.71□□□□□ -1.02
NEDD8-206ENST00000531430 NIPSNAP2O75323 286 aa8.71□□□□□ -1.02
NEDD8-206ENST00000531430 ZNF189O75820 626 aaPredicted RBP8.71□□□□□ -1.02
NEDD8-206ENST00000531430 ZWINTO95229 277 aa8.71□□□□□ -1.02
NEDD8-206ENST00000531430 CCNDBP1O95273 360 aa8.71□□□□□ -1.02
NEDD8-206ENST00000531430 ZNF24P17028 368 aa8.71□□□□□ -1.02
NEDD8-206ENST00000531430 IL1RNP18510 177 aa8.71□□□□□ -1.02
NEDD8-206ENST00000531430 PTGER1P34995 402 aa8.71□□□□□ -1.02
NEDD8-206ENST00000531430 XCR1P46094 333 aa8.71□□□□□ -1.02
NEDD8-206ENST00000531430 IST1P53990 364 aa8.71□□□□□ -1.02
NEDD8-206ENST00000531430 PNLIPRP1P54315 467 aa8.71□□□□□ -1.02
NEDD8-206ENST00000531430 OR4D2P58180 307 aa8.71□□□□□ -1.02
NEDD8-206ENST00000531430 PPP2R2AP63151 447 aa8.71□□□□□ -1.02
NEDD8-206ENST00000531430 PRDX1Q06830 199 aaKnown RBP8.71□□□□□ -1.02
NEDD8-206ENST00000531430 NSDHLQ15738 373 aa8.71□□□□□ -1.02
NEDD8-206ENST00000531430 EXT1Q16394 746 aa8.71□□□□□ -1.02
NEDD8-206ENST00000531430 SFT2D3Q587I9 215 aa8.71□□□□□ -1.02
NEDD8-206ENST00000531430 MEI1Q5TIA1 1274 aa8.71□□□□□ -1.02
NEDD8-206ENST00000531430 ICE2Q659A1 982 aa8.71□□□□□ -1.02
NEDD8-206ENST00000531430 PAPD4Q6PIY7 484 aaKnown RBP8.71□□□□□ -1.02
NEDD8-206ENST00000531430 SDCCAG8Q86SQ7 713 aaPredicted RBP8.71□□□□□ -1.02
NEDD8-206ENST00000531430 PRUNE1Q86TP1 453 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms