RNA–Protein interactions for RNA: ENST00000530701.1

FGFR1-235, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 276 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-235ENST00000530701 UBAC1Q9BSL1 405 aa1.96□□□□□ -2.1
FGFR1-235ENST00000530701 TPPP3Q9BW30 176 aa1.96□□□□□ -2.1
FGFR1-235ENST00000530701 KRTAP4-6Q9BYQ5 205 aa1.96□□□□□ -2.1
FGFR1-235ENST00000530701 TRIM6Q9C030 488 aaPredicted RBP1.96□□□□□ -2.1
FGFR1-235ENST00000530701 SLC39A8Q9C0K1 460 aa1.96□□□□□ -2.1
FGFR1-235ENST00000530701 RAB6CQ9H0N0 254 aa1.96□□□□□ -2.1
FGFR1-235ENST00000530701 FAM49AQ9H0Q0 323 aaPredicted RBP1.96□□□□□ -2.1
FGFR1-235ENST00000530701 DPEP2Q9H4A9 486 aa1.96□□□□□ -2.1
FGFR1-235ENST00000530701 TMEM231Q9H6L2 316 aa1.96□□□□□ -2.1
FGFR1-235ENST00000530701 C10orf88Q9H8K7 445 aa1.96□□□□□ -2.1
FGFR1-235ENST00000530701 MARCH7Q9H992 704 aa1.96□□□□□ -2.1
FGFR1-235ENST00000530701 UBTD1Q9HAC8 227 aa1.96□□□□□ -2.1
FGFR1-235ENST00000530701 CENPMQ9NSP4 180 aa1.96□□□□□ -2.1
FGFR1-235ENST00000530701 PNPLA3Q9NST1 481 aa1.96□□□□□ -2.1
FGFR1-235ENST00000530701 P4HTMQ9NXG6 502 aa1.96□□□□□ -2.1
FGFR1-235ENST00000530701 PTTG2Q9NZH5 202 aa1.96□□□□□ -2.1
FGFR1-235ENST00000530701 TMOD2Q9NZR1 351 aa1.96□□□□□ -2.1
FGFR1-235ENST00000530701 ZNF624Q9P2J8 865 aaPredicted RBP1.96□□□□□ -2.1
FGFR1-235ENST00000530701 COPS7AQ9UBW8 275 aa1.96□□□□□ -2.1
FGFR1-235ENST00000530701 LRWD1Q9UFC0 647 aa1.96□□□□□ -2.1
FGFR1-235ENST00000530701 C19orf25Q9UFG5 118 aaPredicted RBP1.96□□□□□ -2.1
FGFR1-235ENST00000530701 DNPEPQ9ULA0 475 aa1.96□□□□□ -2.1
FGFR1-235ENST00000530701 KCNS2Q9ULS6 477 aa1.96□□□□□ -2.1
FGFR1-235ENST00000530701 SLC7A7Q9UM01 511 aa1.96□□□□□ -2.1
FGFR1-235ENST00000530701 CHMP2BQ9UQN3 213 aa1.96□□□□□ -2.1
FGFR1-235ENST00000530701 ERVK-19Q9WJR5 959 aa1.96□□□□□ -2.1
FGFR1-235ENST00000530701 NUDCQ9Y266 331 aa1.96□□□□□ -2.1
FGFR1-235ENST00000530701 MYRFQ9Y2G1 1151 aa1.96□□□□□ -2.1
FGFR1-235ENST00000530701 WDR37Q9Y2I8 494 aa1.96□□□□□ -2.1
FGFR1-235ENST00000530701 SH3GLB1Q9Y371 365 aa1.96□□□□□ -2.1
FGFR1-235ENST00000530701 OR2W1Q9Y3N9 320 aa1.96□□□□□ -2.1
FGFR1-235ENST00000530701 PCDHAC2Q9Y5I4 1007 aa1.96□□□□□ -2.1
FGFR1-235ENST00000530701 DMRT1Q9Y5R6 373 aa1.96□□□□□ -2.1
FGFR1-235ENST00000530701 DDX49Q9Y6V7 483 aaKnown RBP1.96□□□□□ -2.1
FGFR1-235ENST00000530701 COLEC10Q9Y6Z7 277 aa1.96□□□□□ -2.1
FGFR1-235ENST00000530701 U3KQV3 271 aa1.96□□□□□ -2.1
FGFR1-235ENST00000530701 DHX29Q7Z478 1369 aaKnown RBP1.96□□□□□ -2.1
FGFR1-235ENST00000530701 ATAD2BQ9ULI0 1458 aa1.95□□□□□ -2.1
FGFR1-235ENST00000530701 FAM205AQ6ZU69 1335 aa1.95□□□□□ -2.1
FGFR1-235ENST00000530701 WDR33Q9C0J8 1336 aaKnown RBP1.95□□□□□ -2.1
FGFR1-235ENST00000530701 IGLV5-37A0A075B6J1 123 aa1.95□□□□□ -2.1
FGFR1-235ENST00000530701 CLRN2A0PK11 232 aa1.95□□□□□ -2.1
FGFR1-235ENST00000530701 C2orf81A6NN90 581 aa1.95□□□□□ -2.1
FGFR1-235ENST00000530701 INAFM1C9JVW0 142 aa1.95□□□□□ -2.1
FGFR1-235ENST00000530701 O00370 1275 aa1.95□□□□□ -2.1
FGFR1-235ENST00000530701 E2F3O00716 465 aa1.95□□□□□ -2.1
FGFR1-235ENST00000530701 CHUKO15111 745 aa1.95□□□□□ -2.1
FGFR1-235ENST00000530701 MID1O15344 667 aa1.95□□□□□ -2.1
FGFR1-235ENST00000530701 PSMD3O43242 534 aa1.95□□□□□ -2.1
FGFR1-235ENST00000530701 SLC28A2O43868 658 aa1.95□□□□□ -2.1
FGFR1-235ENST00000530701 LDB3O75112 727 aa1.95□□□□□ -2.1
FGFR1-235ENST00000530701 CLN5O75503 358 aa1.95□□□□□ -2.1
FGFR1-235ENST00000530701 PRKRAO75569 313 aaKnown RBP1.95□□□□□ -2.1
FGFR1-235ENST00000530701 DIRAS3O95661 229 aa1.95□□□□□ -2.1
FGFR1-235ENST00000530701 PTBP3O95758 552 aaKnown RBP1.95□□□□□ -2.1
FGFR1-235ENST00000530701 CAVIN2O95810 425 aa1.95□□□□□ -2.1
FGFR1-235ENST00000530701 GLUD1P00367 558 aa1.95□□□□□ -2.1
FGFR1-235ENST00000530701 PDGFBP01127 241 aaPredicted RBP1.95□□□□□ -2.1
FGFR1-235ENST00000530701 RAF1P04049 648 aa1.95□□□□□ -2.1
FGFR1-235ENST00000530701 PROS1P07225 676 aa1.95□□□□□ -2.1
FGFR1-235ENST00000530701 HOXC6P09630 235 aa1.95□□□□□ -2.1
FGFR1-235ENST00000530701 TPBGLP0DKB5 382 aa1.95□□□□□ -2.1
FGFR1-235ENST00000530701 CALCBP10092 127 aa1.95□□□□□ -2.1
FGFR1-235ENST00000530701 HSPA5P11021 654 aaKnown RBP1.95□□□□□ -2.1
FGFR1-235ENST00000530701 GM2AP17900 193 aa1.95□□□□□ -2.1
FGFR1-235ENST00000530701 SCP2P22307 547 aa1.95□□□□□ -2.1
FGFR1-235ENST00000530701 ACP1P24666 158 aa1.95□□□□□ -2.1
FGFR1-235ENST00000530701 DNAJB1P25685 340 aa1.95□□□□□ -2.1
FGFR1-235ENST00000530701 ELAVL4P26378 380 aaKnown RBP1.95□□□□□ -2.1
FGFR1-235ENST00000530701 ARRB2P32121 409 aa1.95□□□□□ -2.1
FGFR1-235ENST00000530701 MDH1P40925 334 aaKnown RBP1.95□□□□□ -2.1
FGFR1-235ENST00000530701 RFX5P48382 616 aaPredicted RBP1.95□□□□□ -2.1
FGFR1-235ENST00000530701 GLUD2P49448 558 aa1.95□□□□□ -2.1
FGFR1-235ENST00000530701 CNN1P51911 297 aaKnown RBP1.95□□□□□ -2.1
FGFR1-235ENST00000530701 CDH11P55287 796 aa1.95□□□□□ -2.1
FGFR1-235ENST00000530701 RPP38P78345 283 aaKnown RBP1.95□□□□□ -2.1
FGFR1-235ENST00000530701 MYL7Q01449 175 aa1.95□□□□□ -2.1
FGFR1-235ENST00000530701 SRSF4Q08170 494 aaKnown RBP1.95□□□□□ -2.1
FGFR1-235ENST00000530701 ZNF155Q12901 538 aaPredicted RBP1.95□□□□□ -2.1
FGFR1-235ENST00000530701 NME3Q13232 169 aa1.95□□□□□ -2.1
FGFR1-235ENST00000530701 RAPSNQ13702 412 aa1.95□□□□□ -2.1
FGFR1-235ENST00000530701 BTG3Q14201 252 aaPredicted RBP1.95□□□□□ -2.1
FGFR1-235ENST00000530701 CEBPEQ15744 281 aa1.95□□□□□ -2.1
FGFR1-235ENST00000530701 KIF19Q2TAC6 998 aa1.95□□□□□ -2.1
FGFR1-235ENST00000530701 ITPRIPL2Q3MIP1 535 aa1.95□□□□□ -2.1
FGFR1-235ENST00000530701 PHLDA2Q53GA4 152 aa1.95□□□□□ -2.1
FGFR1-235ENST00000530701 ZNF542PQ5EBM4 170 aa1.95□□□□□ -2.1
FGFR1-235ENST00000530701 MTX3Q5HYI7 312 aa1.95□□□□□ -2.1
FGFR1-235ENST00000530701 SLC35D3Q5M8T2 416 aa1.95□□□□□ -2.1
FGFR1-235ENST00000530701 PDSS1Q5T2R2 415 aa1.95□□□□□ -2.1
FGFR1-235ENST00000530701 C20orf194Q5TEA3 1177 aa1.95□□□□□ -2.1
FGFR1-235ENST00000530701 FAM171BQ6P995 826 aa1.95□□□□□ -2.1
FGFR1-235ENST00000530701 CASC1Q6TDU7 716 aa1.95□□□□□ -2.1
FGFR1-235ENST00000530701 DLEU7Q6UYE1 221 aa1.95□□□□□ -2.1
FGFR1-235ENST00000530701 RAD9BQ6WBX8 426 aa1.95□□□□□ -2.1
FGFR1-235ENST00000530701 ASB18Q6ZVZ8 466 aa1.95□□□□□ -2.1
FGFR1-235ENST00000530701 SLC16A9Q7RTY1 509 aa1.95□□□□□ -2.1
FGFR1-235ENST00000530701 PIWIL4Q7Z3Z4 852 aaKnown RBP1.95□□□□□ -2.1
FGFR1-235ENST00000530701 TMEM110Q86TL2 294 aa1.95□□□□□ -2.1
FGFR1-235ENST00000530701 PRUNE1Q86TP1 453 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms