RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 B3GNTL1Q67FW5 361 aaPredicted RBP13.5□□□□□ -0.25
CAPN1-212ENST00000527887 ISLR2Q6UXK2 745 aa13.5□□□□□ -0.25
CAPN1-212ENST00000527887 SHISA6Q6ZSJ9 500 aa13.5□□□□□ -0.25
CAPN1-212ENST00000527887 NDUFAF7Q7L592 441 aa13.5□□□□□ -0.25
CAPN1-212ENST00000527887 CNTN4Q8IWV2 1026 aa13.5□□□□□ -0.25
CAPN1-212ENST00000527887 KBTBD2Q8IY47 623 aa13.5□□□□□ -0.25
CAPN1-212ENST00000527887 CPNE9Q8IYJ1 553 aa13.5□□□□□ -0.25
CAPN1-212ENST00000527887 CISD2Q8N5K1 135 aaKnown RBP13.5□□□□□ -0.25
CAPN1-212ENST00000527887 NOA1Q8NC60 698 aaKnown RBP13.5□□□□□ -0.25
CAPN1-212ENST00000527887 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.5□□□□□ -0.25
CAPN1-212ENST00000527887 LRRC39Q96DD0 335 aa13.5□□□□□ -0.25
CAPN1-212ENST00000527887 THOC3Q96J01 351 aaKnown RBP13.5□□□□□ -0.25
CAPN1-212ENST00000527887 PARVBQ9HBI1 364 aa13.5□□□□□ -0.25
CAPN1-212ENST00000527887 CCDC177Q9NQR7 707 aaPredicted RBP13.5□□□□□ -0.25
CAPN1-212ENST00000527887 IARS2Q9NSE4 1012 aaKnown RBP13.5□□□□□ -0.25
CAPN1-212ENST00000527887 LUZP4Q9P127 313 aa13.5□□□□□ -0.25
CAPN1-212ENST00000527887 TRPC4Q9UBN4 977 aa13.5□□□□□ -0.25
CAPN1-212ENST00000527887 ASIC3Q9UHC3 531 aa13.5□□□□□ -0.25
CAPN1-212ENST00000527887 CORO1CQ9ULV4 474 aaPredicted RBP13.5□□□□□ -0.25
CAPN1-212ENST00000527887 UTP20O75691 2785 aaKnown RBP13.5□□□□□ -0.25
CAPN1-212ENST00000527887 PCSK5Q92824 1860 aa13.5□□□□□ -0.25
CAPN1-212ENST00000527887 FER1L5A0AVI2 2057 aa13.49□□□□□ -0.25
CAPN1-212ENST00000527887 SPTAN1Q13813 2472 aaKnown RBP13.49□□□□□ -0.25
CAPN1-212ENST00000527887 NSG1A0A0A6YYJ2 146 aa13.49□□□□□ -0.25
CAPN1-212ENST00000527887 IDSB3KWA1 339 aa13.49□□□□□ -0.25
CAPN1-212ENST00000527887 H0YIG0 161 aa13.49□□□□□ -0.25
CAPN1-212ENST00000527887 NRP2O60462 931 aa13.49□□□□□ -0.25
CAPN1-212ENST00000527887 HIST1H2AGP0C0S8 130 aaPredicted RBP13.49□□□□□ -0.25
CAPN1-212ENST00000527887 HIST1H2ADP20671 130 aa13.49□□□□□ -0.25
CAPN1-212ENST00000527887 TSFMP43897 325 aaKnown RBP13.49□□□□□ -0.25
CAPN1-212ENST00000527887 AVPR1BP47901 424 aa13.49□□□□□ -0.25
CAPN1-212ENST00000527887 GLRBP48167 497 aa13.49□□□□□ -0.25
CAPN1-212ENST00000527887 MPP1Q00013 466 aa13.49□□□□□ -0.25
CAPN1-212ENST00000527887 DHX9Q08211 1270 aaKnown RBP13.49□□□□□ -0.25
CAPN1-212ENST00000527887 MFAP5Q13361 173 aa13.49□□□□□ -0.25
CAPN1-212ENST00000527887 TLR1Q15399 786 aa13.49□□□□□ -0.25
CAPN1-212ENST00000527887 HKDC1Q2TB90 917 aa13.49□□□□□ -0.25
CAPN1-212ENST00000527887 PRR30Q53SZ7 412 aaPredicted RBP13.49□□□□□ -0.25
CAPN1-212ENST00000527887 VWA2Q5GFL6 755 aa13.49□□□□□ -0.25
CAPN1-212ENST00000527887 RPUSD3Q6P087 351 aaKnown RBP13.49□□□□□ -0.25
CAPN1-212ENST00000527887 RIPOR1Q6ZS17 1223 aa13.49□□□□□ -0.25
CAPN1-212ENST00000527887 ADCK2Q7Z695 626 aa13.49□□□□□ -0.25
CAPN1-212ENST00000527887 CUZD1Q86UP6 607 aa13.49□□□□□ -0.25
CAPN1-212ENST00000527887 TMEM151BQ8IW70 566 aa13.49□□□□□ -0.25
CAPN1-212ENST00000527887 PARP9Q8IXQ6 854 aa13.49□□□□□ -0.25
CAPN1-212ENST00000527887 MYO1HQ8N1T3 1032 aa13.49□□□□□ -0.25
CAPN1-212ENST00000527887 ARHGEF39Q8N4T4 335 aa13.49□□□□□ -0.25
CAPN1-212ENST00000527887 PPFIBP2Q8ND30 876 aa13.49□□□□□ -0.25
CAPN1-212ENST00000527887 LRRN4CLQ8ND94 238 aa13.49□□□□□ -0.25
CAPN1-212ENST00000527887 DNAJB14Q8TBM8 379 aa13.49□□□□□ -0.25
CAPN1-212ENST00000527887 ANKRD7Q92527 254 aa13.49□□□□□ -0.25
CAPN1-212ENST00000527887 C19orf60Q96EN9 201 aa13.49□□□□□ -0.25
CAPN1-212ENST00000527887 MMABQ96EY8 250 aaPredicted RBP13.49□□□□□ -0.25
CAPN1-212ENST00000527887 HIST1H2AHQ96KK5 128 aa13.49□□□□□ -0.25
CAPN1-212ENST00000527887 HIST1H2AJQ99878 128 aa13.49□□□□□ -0.25
CAPN1-212ENST00000527887 H2AFJQ9BTM1 129 aa13.49□□□□□ -0.25
CAPN1-212ENST00000527887 YIPF2Q9BWQ6 316 aa13.49□□□□□ -0.25
CAPN1-212ENST00000527887 ZBTB20Q9HC78 741 aaPredicted RBP13.49□□□□□ -0.25
CAPN1-212ENST00000527887 ASF1BQ9NVP2 202 aa13.49□□□□□ -0.25
CAPN1-212ENST00000527887 STOX2Q9P2F5 926 aaPredicted RBP13.49□□□□□ -0.25
CAPN1-212ENST00000527887 TNRC6AQ8NDV7 1962 aaKnown RBP13.49□□□□□ -0.25
CAPN1-212ENST00000527887 LOC102723996A0A087X1L8 192 aa13.48□□□□□ -0.25
CAPN1-212ENST00000527887 FAM187AA6NFU0 413 aa13.48□□□□□ -0.25
CAPN1-212ENST00000527887 H7BY64 318 aa13.48□□□□□ -0.25
CAPN1-212ENST00000527887 FOXS1O43638 330 aa13.48□□□□□ -0.25
CAPN1-212ENST00000527887 AHSGP02765 367 aa13.48□□□□□ -0.25
CAPN1-212ENST00000527887 SERPINA7P05543 415 aa13.48□□□□□ -0.25
CAPN1-212ENST00000527887 HEXBP07686 556 aa13.48□□□□□ -0.25
CAPN1-212ENST00000527887 GRK3P35626 688 aa13.48□□□□□ -0.25
CAPN1-212ENST00000527887 ELOAQ14241 798 aaKnown RBP13.48□□□□□ -0.25
CAPN1-212ENST00000527887 MORF4L2Q15014 288 aa13.48□□□□□ -0.25
CAPN1-212ENST00000527887 EIF2S3LQ2VIR3 472 aaKnown RBP13.48□□□□□ -0.25
CAPN1-212ENST00000527887 PIWIL4Q7Z3Z4 852 aaKnown RBP13.48□□□□□ -0.25
CAPN1-212ENST00000527887 C17orf64Q86WR6 236 aa13.48□□□□□ -0.25
CAPN1-212ENST00000527887 PDIK1LQ8N165 341 aa13.48□□□□□ -0.25
CAPN1-212ENST00000527887 DTWD1Q8N5C7 304 aa13.48□□□□□ -0.25
CAPN1-212ENST00000527887 EEF1AKMT1Q8WVE0 214 aa13.48□□□□□ -0.25
CAPN1-212ENST00000527887 PRAP1Q96NZ9 151 aa13.48□□□□□ -0.25
CAPN1-212ENST00000527887 HAUS8Q9BT25 410 aa13.48□□□□□ -0.25
CAPN1-212ENST00000527887 TRIM54Q9BYV2 358 aa13.48□□□□□ -0.25
CAPN1-212ENST00000527887 ZNF160Q9HCG1 818 aa13.48□□□□□ -0.25
CAPN1-212ENST00000527887 RIC8BQ9NVN3 520 aa13.48□□□□□ -0.25
CAPN1-212ENST00000527887 ARGLU1Q9NWB6 273 aaPredicted RBP13.48□□□□□ -0.25
CAPN1-212ENST00000527887 NOVA2Q9UNW9 492 aaKnown RBP13.48□□□□□ -0.25
CAPN1-212ENST00000527887 PDE10AQ9Y233 779 aa13.48□□□□□ -0.25
CAPN1-212ENST00000527887 SNRNP200O75643 2136 aaKnown RBP13.48□□□□□ -0.25
CAPN1-212ENST00000527887 CCDC151A5D8V7 595 aa13.47□□□□□ -0.25
CAPN1-212ENST00000527887 PABPN1LA6NDY0 278 aaKnown RBP13.47□□□□□ -0.25
CAPN1-212ENST00000527887 CYSRT1A8MQ03 144 aa13.47□□□□□ -0.25
CAPN1-212ENST00000527887 MASP2O00187 686 aa13.47□□□□□ -0.25
CAPN1-212ENST00000527887 HAT1O14929 419 aa13.47□□□□□ -0.25
CAPN1-212ENST00000527887 BMP10O95393 424 aa13.47□□□□□ -0.25
CAPN1-212ENST00000527887 NSA2O95478 260 aaKnown RBP13.47□□□□□ -0.25
CAPN1-212ENST00000527887 TNFRSF8P28908 595 aa13.47□□□□□ -0.25
CAPN1-212ENST00000527887 AP1S2P56377 157 aa13.47□□□□□ -0.25
CAPN1-212ENST00000527887 IL2P60568 153 aa13.47□□□□□ -0.25
CAPN1-212ENST00000527887 TBPL1P62380 186 aa13.47□□□□□ -0.25
CAPN1-212ENST00000527887 Q0VFX4 171 aa13.47□□□□□ -0.25
CAPN1-212ENST00000527887 ILF2Q12905 390 aaKnown RBP13.47□□□□□ -0.25
CAPN1-212ENST00000527887 MRPL49Q13405 166 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms