RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 SNRNP40Q96DI7 357 aaKnown RBP12.74□□□□□ -0.37
CAPN1-207ENST00000527189 MMABQ96EY8 250 aaPredicted RBP12.74□□□□□ -0.37
CAPN1-207ENST00000527189 CERS2Q96G23 380 aa12.74□□□□□ -0.37
CAPN1-207ENST00000527189 HIST1H2AHQ96KK5 128 aa12.74□□□□□ -0.37
CAPN1-207ENST00000527189 PRAP1Q96NZ9 151 aa12.74□□□□□ -0.37
CAPN1-207ENST00000527189 BARD1Q99728 777 aaKnown RBP12.74□□□□□ -0.37
CAPN1-207ENST00000527189 HIST1H2AJQ99878 128 aa12.74□□□□□ -0.37
CAPN1-207ENST00000527189 WDR77Q9BQA1 342 aaPredicted RBP12.74□□□□□ -0.37
CAPN1-207ENST00000527189 H2AFJQ9BTM1 129 aa12.74□□□□□ -0.37
CAPN1-207ENST00000527189 ILKAPQ9H0C8 392 aaPredicted RBP12.74□□□□□ -0.37
CAPN1-207ENST00000527189 STOX2Q9P2F5 926 aaPredicted RBP12.74□□□□□ -0.37
CAPN1-207ENST00000527189 TRPC4Q9UBN4 977 aa12.74□□□□□ -0.37
CAPN1-207ENST00000527189 RNF14Q9UBS8 474 aa12.74□□□□□ -0.37
CAPN1-207ENST00000527189 PDE10AQ9Y233 779 aa12.74□□□□□ -0.37
CAPN1-207ENST00000527189 SHANK1Q9Y566 2161 aa12.73□□□□□ -0.37
CAPN1-207ENST00000527189 IDSB3KWA1 339 aa12.73□□□□□ -0.37
CAPN1-207ENST00000527189 H0YIG0 161 aa12.73□□□□□ -0.37
CAPN1-207ENST00000527189 CCDC188H7C350 402 aa12.73□□□□□ -0.37
CAPN1-207ENST00000527189 MASP2O00187 686 aa12.73□□□□□ -0.37
CAPN1-207ENST00000527189 MAP2K7O14733 419 aa12.73□□□□□ -0.37
CAPN1-207ENST00000527189 FOXS1O43638 330 aa12.73□□□□□ -0.37
CAPN1-207ENST00000527189 F7P08709 466 aaPredicted RBP12.73□□□□□ -0.37
CAPN1-207ENST00000527189 AVPR1BP47901 424 aa12.73□□□□□ -0.37
CAPN1-207ENST00000527189 UQCRFS1P47985 274 aa12.73□□□□□ -0.37
CAPN1-207ENST00000527189 IL2P60568 153 aa12.73□□□□□ -0.37
CAPN1-207ENST00000527189 AP2B1P63010 937 aa12.73□□□□□ -0.37
CAPN1-207ENST00000527189 BBS9Q3SYG4 887 aa12.73□□□□□ -0.37
CAPN1-207ENST00000527189 TEDDM1Q5T9Z0 273 aa12.73□□□□□ -0.37
CAPN1-207ENST00000527189 AGTRAPQ6RW13 159 aa12.73□□□□□ -0.37
CAPN1-207ENST00000527189 PAQR3Q6TCH7 311 aa12.73□□□□□ -0.37
CAPN1-207ENST00000527189 NDUFAF7Q7L592 441 aa12.73□□□□□ -0.37
CAPN1-207ENST00000527189 LAPTM4BQ86VI4 370 aa12.73□□□□□ -0.37
CAPN1-207ENST00000527189 CREG2Q8IUH2 290 aa12.73□□□□□ -0.37
CAPN1-207ENST00000527189 PARP9Q8IXQ6 854 aa12.73□□□□□ -0.37
CAPN1-207ENST00000527189 KBTBD2Q8IY47 623 aa12.73□□□□□ -0.37
CAPN1-207ENST00000527189 DTWD1Q8N5C7 304 aa12.73□□□□□ -0.37
CAPN1-207ENST00000527189 AMER3Q8N944 861 aa12.73□□□□□ -0.37
CAPN1-207ENST00000527189 THOC3Q96J01 351 aaKnown RBP12.73□□□□□ -0.37
CAPN1-207ENST00000527189 NDNQ99608 321 aa12.73□□□□□ -0.37
CAPN1-207ENST00000527189 TRIM54Q9BYV2 358 aa12.73□□□□□ -0.37
CAPN1-207ENST00000527189 EPS8L2Q9H6S3 715 aa12.73□□□□□ -0.37
CAPN1-207ENST00000527189 ZBTB20Q9HC78 741 aaPredicted RBP12.73□□□□□ -0.37
CAPN1-207ENST00000527189 LRRC4CQ9HCJ2 640 aa12.73□□□□□ -0.37
CAPN1-207ENST00000527189 LUZP4Q9P127 313 aa12.73□□□□□ -0.37
CAPN1-207ENST00000527189 VWA7Q9Y334 891 aa12.73□□□□□ -0.37
CAPN1-207ENST00000527189 COPG1Q9Y678 874 aaKnown RBP12.73□□□□□ -0.37
CAPN1-207ENST00000527189 SAR1BQ9Y6B6 198 aa12.73□□□□□ -0.37
CAPN1-207ENST00000527189 NUP210LQ5VU65 1888 aa12.73□□□□□ -0.37
CAPN1-207ENST00000527189 ESPL1Q14674 2120 aa12.73□□□□□ -0.37
CAPN1-207ENST00000527189 NSG1A0A0A6YYJ2 146 aa12.72□□□□□ -0.37
CAPN1-207ENST00000527189 KIF2AO00139 706 aaPredicted RBP12.72□□□□□ -0.37
CAPN1-207ENST00000527189 NDC80O14777 642 aa12.72□□□□□ -0.37
CAPN1-207ENST00000527189 HAT1O14929 419 aa12.72□□□□□ -0.37
CAPN1-207ENST00000527189 AGFG2O95081 481 aa12.72□□□□□ -0.37
CAPN1-207ENST00000527189 CBX6O95503 412 aa12.72□□□□□ -0.37
CAPN1-207ENST00000527189 ICAM2P13598 275 aa12.72□□□□□ -0.37
CAPN1-207ENST00000527189 GRK3P35626 688 aa12.72□□□□□ -0.37
CAPN1-207ENST00000527189 ELK3P41970 407 aa12.72□□□□□ -0.37
CAPN1-207ENST00000527189 PAFAH1B1P43034 410 aa12.72□□□□□ -0.37
CAPN1-207ENST00000527189 CDKN2DP55273 166 aa12.72□□□□□ -0.37
CAPN1-207ENST00000527189 AP1S2P56377 157 aa12.72□□□□□ -0.37
CAPN1-207ENST00000527189 TBPL1P62380 186 aa12.72□□□□□ -0.37
CAPN1-207ENST00000527189 DR1Q01658 176 aa12.72□□□□□ -0.37
CAPN1-207ENST00000527189 ILF2Q12905 390 aaKnown RBP12.72□□□□□ -0.37
CAPN1-207ENST00000527189 CBLBQ13191 982 aa12.72□□□□□ -0.37
CAPN1-207ENST00000527189 C4orf17Q53FE4 359 aa12.72□□□□□ -0.37
CAPN1-207ENST00000527189 PRR30Q53SZ7 412 aaPredicted RBP12.72□□□□□ -0.37
CAPN1-207ENST00000527189 B3GNTL1Q67FW5 361 aaPredicted RBP12.72□□□□□ -0.37
CAPN1-207ENST00000527189 HIBCHQ6NVY1 386 aaPredicted RBP12.72□□□□□ -0.37
CAPN1-207ENST00000527189 LCTLQ6UWM7 567 aa12.72□□□□□ -0.37
CAPN1-207ENST00000527189 ISLR2Q6UXK2 745 aa12.72□□□□□ -0.37
CAPN1-207ENST00000527189 RIPOR1Q6ZS17 1223 aa12.72□□□□□ -0.37
CAPN1-207ENST00000527189 C17orf64Q86WR6 236 aa12.72□□□□□ -0.37
CAPN1-207ENST00000527189 IGDCC3Q8IVU1 814 aa12.72□□□□□ -0.37
CAPN1-207ENST00000527189 CISD2Q8N5K1 135 aaKnown RBP12.72□□□□□ -0.37
CAPN1-207ENST00000527189 CAMKVQ8NCB2 501 aa12.72□□□□□ -0.37
CAPN1-207ENST00000527189 DNAJB14Q8TBM8 379 aa12.72□□□□□ -0.37
CAPN1-207ENST00000527189 TM4SF19Q96DZ7 209 aa12.72□□□□□ -0.37
CAPN1-207ENST00000527189 PDLIM5Q96HC4 596 aaKnown RBP12.72□□□□□ -0.37
CAPN1-207ENST00000527189 HAUS8Q9BT25 410 aa12.72□□□□□ -0.37
CAPN1-207ENST00000527189 SARGQ9BW04 601 aa12.72□□□□□ -0.37
CAPN1-207ENST00000527189 YIPF2Q9BWQ6 316 aa12.72□□□□□ -0.37
CAPN1-207ENST00000527189 SGPP1Q9BX95 441 aa12.72□□□□□ -0.37
CAPN1-207ENST00000527189 SYNPO2LQ9H987 977 aa12.72□□□□□ -0.37
CAPN1-207ENST00000527189 PPANQ9NQ55 473 aaKnown RBP12.72□□□□□ -0.37
CAPN1-207ENST00000527189 AGPAT4Q9NRZ5 378 aa12.72□□□□□ -0.37
CAPN1-207ENST00000527189 ABCF3Q9NUQ8 709 aa12.72□□□□□ -0.37
CAPN1-207ENST00000527189 ASF1BQ9NVP2 202 aa12.72□□□□□ -0.37
CAPN1-207ENST00000527189 MAP10Q9P2G4 905 aa12.72□□□□□ -0.37
CAPN1-207ENST00000527189 ADAMTS6Q9UKP5 1117 aa12.72□□□□□ -0.37
CAPN1-207ENST00000527189 PCDHGA10Q9Y5H3 936 aa12.72□□□□□ -0.37
CAPN1-207ENST00000527189 TEX264Q9Y6I9 313 aa12.72□□□□□ -0.37
CAPN1-207ENST00000527189 PRRC2CQ9Y520 2896 aaKnown RBP12.72□□□□□ -0.37
CAPN1-207ENST00000527189 MDC1Q14676 2089 aaKnown RBP12.71□□□□□ -0.37
CAPN1-207ENST00000527189 LOC102723996A0A087X1L8 192 aa12.71□□□□□ -0.37
CAPN1-207ENST00000527189 A0A0A6YYC8 382 aaPredicted RBP12.71□□□□□ -0.37
CAPN1-207ENST00000527189 PABPN1LA6NDY0 278 aaKnown RBP12.71□□□□□ -0.37
CAPN1-207ENST00000527189 I3L1I5 382 aaPredicted RBP12.71□□□□□ -0.37
CAPN1-207ENST00000527189 NSA2O95478 260 aaKnown RBP12.71□□□□□ -0.37
CAPN1-207ENST00000527189 TSPAN12O95859 305 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms