RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 VN1R2Q8NFZ6 395 aa16.98■□□□□ 0.31
USH1C-205ENST00000527020 OR7G3Q8NG95 312 aa16.98■□□□□ 0.31
USH1C-205ENST00000527020 SH3KBP1Q96B97 665 aa16.98■□□□□ 0.31
USH1C-205ENST00000527020 LHPPQ9H008 270 aa16.98■□□□□ 0.31
USH1C-205ENST00000527020 EXD2Q9NVH0 621 aa16.98■□□□□ 0.31
USH1C-205ENST00000527020 GABRR3A8MPY1 467 aa16.97■□□□□ 0.31
USH1C-205ENST00000527020 EPCAMP16422 314 aa16.97■□□□□ 0.31
USH1C-205ENST00000527020 GSTM2P28161 218 aa16.97■□□□□ 0.31
USH1C-205ENST00000527020 KDELR2P33947 212 aa16.97■□□□□ 0.31
USH1C-205ENST00000527020 VLDLRP98155 873 aa16.97■□□□□ 0.31
USH1C-205ENST00000527020 GTF2IRD2BQ6EKJ0 949 aa16.97■□□□□ 0.31
USH1C-205ENST00000527020 VTCN1Q7Z7D3 282 aa16.97■□□□□ 0.31
USH1C-205ENST00000527020 GTF2IRD2Q86UP8 949 aa16.97■□□□□ 0.31
USH1C-205ENST00000527020 C12orf40Q86WS4 652 aa16.97■□□□□ 0.31
USH1C-205ENST00000527020 HCAR2Q8TDS4 363 aa16.97■□□□□ 0.31
USH1C-205ENST00000527020 FBLIM1Q8WUP2 373 aa16.97■□□□□ 0.31
USH1C-205ENST00000527020 CHTF18Q8WVB6 975 aa16.97■□□□□ 0.31
USH1C-205ENST00000527020 ING5Q8WYH8 240 aa16.97■□□□□ 0.31
USH1C-205ENST00000527020 OTUB2Q96DC9 234 aa16.97■□□□□ 0.31
USH1C-205ENST00000527020 METTL2AQ96IZ6 378 aaKnown RBP16.97■□□□□ 0.31
USH1C-205ENST00000527020 LRIG1Q96JA1 1093 aa16.97■□□□□ 0.31
USH1C-205ENST00000527020 WRAP53Q9BUR4 548 aaKnown RBP16.97■□□□□ 0.31
USH1C-205ENST00000527020 CHST8Q9H2A9 424 aa16.97■□□□□ 0.31
USH1C-205ENST00000527020 PAK1IP1Q9NWT1 392 aaPredicted RBP16.97■□□□□ 0.31
USH1C-205ENST00000527020 TMEM9Q9P0T7 183 aa16.97■□□□□ 0.31
USH1C-205ENST00000527020 LILRB5O75023 590 aa16.96■□□□□ 0.31
USH1C-205ENST00000527020 ITGAMP11215 1152 aa16.96■□□□□ 0.31
USH1C-205ENST00000527020 CEBPBP17676 345 aa16.96■□□□□ 0.31
USH1C-205ENST00000527020 VASPP50552 380 aaPredicted RBP16.96■□□□□ 0.31
USH1C-205ENST00000527020 TPD52P55327 224 aaPredicted RBP16.96■□□□□ 0.31
USH1C-205ENST00000527020 GABARAPL2P60520 117 aa16.96■□□□□ 0.31
USH1C-205ENST00000527020 PIGFQ07326 219 aa16.96■□□□□ 0.31
USH1C-205ENST00000527020 MESP2Q0VG99 397 aa16.96■□□□□ 0.31
USH1C-205ENST00000527020 DHCR24Q15392 516 aa16.96■□□□□ 0.31
USH1C-205ENST00000527020 TCEAL5Q5H9L2 206 aa16.96■□□□□ 0.31
USH1C-205ENST00000527020 OR2T5Q6IEZ7 315 aa16.96■□□□□ 0.31
USH1C-205ENST00000527020 SLCO4C1Q6ZQN7 724 aa16.96■□□□□ 0.31
USH1C-205ENST00000527020 SYNPOQ8N3V7 929 aa16.96■□□□□ 0.31
USH1C-205ENST00000527020 CPA6Q8N4T0 437 aa16.96■□□□□ 0.31
USH1C-205ENST00000527020 OR2T29Q8NH02 315 aa16.96■□□□□ 0.31
USH1C-205ENST00000527020 HUS1BQ8NHY5 278 aa16.96■□□□□ 0.31
USH1C-205ENST00000527020 NEIL2Q969S2 332 aa16.96■□□□□ 0.31
USH1C-205ENST00000527020 COQ10AQ96MF6 247 aa16.96■□□□□ 0.31
USH1C-205ENST00000527020 DUSP26Q9BV47 211 aa16.96■□□□□ 0.31
USH1C-205ENST00000527020 C11orf49Q9H6J7 331 aa16.96■□□□□ 0.31
USH1C-205ENST00000527020 TM9SF3Q9HD45 589 aa16.96■□□□□ 0.31
USH1C-205ENST00000527020 IL23AQ9NPF7 189 aa16.96■□□□□ 0.31
USH1C-205ENST00000527020 CXXC1Q9P0U4 656 aaPredicted RBP16.96■□□□□ 0.31
USH1C-205ENST00000527020 SH2B3Q9UQQ2 575 aa16.96■□□□□ 0.31
USH1C-205ENST00000527020 COQ6Q9Y2Z9 468 aa16.96■□□□□ 0.31
USH1C-205ENST00000527020 PCDHB11Q9Y5F2 797 aa16.96■□□□□ 0.31
USH1C-205ENST00000527020 C1orf226A1L170 272 aa16.96■□□□□ 0.31
USH1C-205ENST00000527020 hCG_2039718K7EN88 272 aa16.96■□□□□ 0.31
USH1C-205ENST00000527020 SLC1A7O00341 560 aa16.96■□□□□ 0.31
USH1C-205ENST00000527020 FOXD2O60548 495 aaPredicted RBP16.96■□□□□ 0.31
USH1C-205ENST00000527020 DIRAS1O95057 198 aa16.96■□□□□ 0.31
USH1C-205ENST00000527020 CYP17A1P05093 508 aa16.96■□□□□ 0.31
USH1C-205ENST00000527020 SRPRAP08240 638 aaKnown RBP16.96■□□□□ 0.31
USH1C-205ENST00000527020 DAPP51397 102 aa16.96■□□□□ 0.31
USH1C-205ENST00000527020 CRYBA2P53672 197 aa16.96■□□□□ 0.31
USH1C-205ENST00000527020 MAPK10P53779 464 aa16.96■□□□□ 0.31
USH1C-205ENST00000527020 HKDC1Q2TB90 917 aa16.96■□□□□ 0.31
USH1C-205ENST00000527020 RFX4Q33E94 735 aa16.96■□□□□ 0.31
USH1C-205ENST00000527020 ERICH5Q6P6B1 374 aa16.96■□□□□ 0.31
USH1C-205ENST00000527020 CBLL1Q75N03 491 aa16.96■□□□□ 0.31
USH1C-205ENST00000527020 GRASPQ7Z6J2 395 aaPredicted RBP16.96■□□□□ 0.31
USH1C-205ENST00000527020 NRSN1Q8IZ57 195 aa16.96■□□□□ 0.31
USH1C-205ENST00000527020 POF1BQ8WVV4 589 aa16.96■□□□□ 0.31
USH1C-205ENST00000527020 TANKQ92844 425 aa16.96■□□□□ 0.31
USH1C-205ENST00000527020 DTD2Q96FN9 168 aa16.96■□□□□ 0.31
USH1C-205ENST00000527020 TPT1P8Q9HAU6 139 aa16.96■□□□□ 0.31
USH1C-205ENST00000527020 EXO1Q9UQ84 846 aaKnown RBP16.96■□□□□ 0.31
USH1C-205ENST00000527020 INSL6Q9Y581 213 aa16.96■□□□□ 0.31
USH1C-205ENST00000527020 NUP210Q8TEM1 1887 aaPredicted RBP16.96■□□□□ 0.31
USH1C-205ENST00000527020 SOBPA7XYQ1 873 aa16.95■□□□□ 0.3
USH1C-205ENST00000527020 K7ESM1 405 aa16.95■□□□□ 0.3
USH1C-205ENST00000527020 C1orf105O95561 183 aa16.95■□□□□ 0.3
USH1C-205ENST00000527020 NUDT7P0C024 238 aa16.95■□□□□ 0.3
USH1C-205ENST00000527020 IDSP22304 550 aa16.95■□□□□ 0.3
USH1C-205ENST00000527020 IGFBP5P24593 272 aa16.95■□□□□ 0.3
USH1C-205ENST00000527020 RYKP34925 604 aa16.95■□□□□ 0.3
USH1C-205ENST00000527020 DGKGP49619 791 aa16.95■□□□□ 0.3
USH1C-205ENST00000527020 ENTPD1P49961 510 aa16.95■□□□□ 0.3
USH1C-205ENST00000527020 RAD23AP54725 363 aa16.95■□□□□ 0.3
USH1C-205ENST00000527020 BIRC2Q13490 618 aa16.95■□□□□ 0.3
USH1C-205ENST00000527020 RAPSNQ13702 412 aa16.95■□□□□ 0.3
USH1C-205ENST00000527020 GTF2H3Q13889 308 aa16.95■□□□□ 0.3
USH1C-205ENST00000527020 CAMKMTQ7Z624 323 aa16.95■□□□□ 0.3
USH1C-205ENST00000527020 GALNT5Q7Z7M9 940 aa16.95■□□□□ 0.3
USH1C-205ENST00000527020 TRIM74Q86UV6 250 aa16.95■□□□□ 0.3
USH1C-205ENST00000527020 LMNTD1Q8N9Z9 388 aa16.95■□□□□ 0.3
USH1C-205ENST00000527020 SPPL3Q8TCT6 385 aa16.95■□□□□ 0.3
USH1C-205ENST00000527020 ZNF480Q8WV37 535 aa16.95■□□□□ 0.3
USH1C-205ENST00000527020 BTNL2Q9UIR0 455 aa16.95■□□□□ 0.3
USH1C-205ENST00000527020 NAALAD2Q9Y3Q0 740 aa16.95■□□□□ 0.3
USH1C-205ENST00000527020 MUC22E2RYF6 1773 aaPredicted RBP16.95■□□□□ 0.3
USH1C-205ENST00000527020 BCKDKO14874 412 aa16.95■□□□□ 0.3
USH1C-205ENST00000527020 ANXA4P09525 319 aaPredicted RBP16.95■□□□□ 0.3
USH1C-205ENST00000527020 TMBIM6P55061 237 aa16.95■□□□□ 0.3
USH1C-205ENST00000527020 GAB1Q13480 694 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms