RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 ZNF749O43361 778 aa12.37□□□□□ -0.43
SMPD1-202ENST00000526280 SMIM24O75264 130 aa12.37□□□□□ -0.43
SMPD1-202ENST00000526280 GLRA3O75311 464 aa12.37□□□□□ -0.43
SMPD1-202ENST00000526280 NTRK1P04629 796 aa12.37□□□□□ -0.43
SMPD1-202ENST00000526280 LIPCP11150 499 aa12.37□□□□□ -0.43
SMPD1-202ENST00000526280 EPORP19235 508 aa12.37□□□□□ -0.43
SMPD1-202ENST00000526280 GRK3P35626 688 aa12.37□□□□□ -0.43
SMPD1-202ENST00000526280 EIF2S3P41091 472 aaKnown RBP12.37□□□□□ -0.43
SMPD1-202ENST00000526280 GYS2P54840 703 aa12.37□□□□□ -0.43
SMPD1-202ENST00000526280 VSX2P58304 361 aaPredicted RBP12.37□□□□□ -0.43
SMPD1-202ENST00000526280 RPS15AP62244 130 aaKnown RBP12.37□□□□□ -0.43
SMPD1-202ENST00000526280 MAP7Q14244 749 aa12.37□□□□□ -0.43
SMPD1-202ENST00000526280 PDK4Q16654 411 aa12.37□□□□□ -0.43
SMPD1-202ENST00000526280 WASHC2DQ5SRD0 308 aa12.37□□□□□ -0.43
SMPD1-202ENST00000526280 CEP85LQ5SZL2 805 aa12.37□□□□□ -0.43
SMPD1-202ENST00000526280 METTL2BQ6P1Q9 378 aaKnown RBP12.37□□□□□ -0.43
SMPD1-202ENST00000526280 SLCO4C1Q6ZQN7 724 aa12.37□□□□□ -0.43
SMPD1-202ENST00000526280 C4orf33Q8N1A6 199 aa12.37□□□□□ -0.43
SMPD1-202ENST00000526280 ZNF655Q8N720 491 aaPredicted RBP12.37□□□□□ -0.43
SMPD1-202ENST00000526280 PTGR2Q8N8N7 351 aaPredicted RBP12.37□□□□□ -0.43
SMPD1-202ENST00000526280 SNX31Q8N9S9 440 aa12.37□□□□□ -0.43
SMPD1-202ENST00000526280 SLC38A9Q8NBW4 561 aa12.37□□□□□ -0.43
SMPD1-202ENST00000526280 PHF21BQ96EK2 531 aa12.37□□□□□ -0.43
SMPD1-202ENST00000526280 THAP11Q96EK4 314 aa12.37□□□□□ -0.43
SMPD1-202ENST00000526280 RNF31Q96EP0 1072 aa12.37□□□□□ -0.43
SMPD1-202ENST00000526280 ACTR5Q9H9F9 607 aaPredicted RBP12.37□□□□□ -0.43
SMPD1-202ENST00000526280 PELI2Q9HAT8 420 aa12.37□□□□□ -0.43
SMPD1-202ENST00000526280 PSD3Q9NYI0 1048 aa12.37□□□□□ -0.43
SMPD1-202ENST00000526280 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.37□□□□□ -0.43
SMPD1-202ENST00000526280 OPTCQ9UBM4 332 aa12.37□□□□□ -0.43
SMPD1-202ENST00000526280 ADAM21Q9UKJ8 722 aa12.37□□□□□ -0.43
SMPD1-202ENST00000526280 EMCNQ9ULC0 261 aa12.37□□□□□ -0.43
SMPD1-202ENST00000526280 GRID1Q9ULK0 1009 aa12.37□□□□□ -0.43
SMPD1-202ENST00000526280 RAXQ9Y2V3 346 aa12.37□□□□□ -0.43
SMPD1-202ENST00000526280 CELSR3Q9NYQ7 3312 aa12.36□□□□□ -0.43
SMPD1-202ENST00000526280 CACNA1BQ00975 2339 aa12.36□□□□□ -0.43
SMPD1-202ENST00000526280 TEX51A0A1B0GUA7 166 aa12.36□□□□□ -0.43
SMPD1-202ENST00000526280 TRBC2A0A5B9 178 aa12.36□□□□□ -0.43
SMPD1-202ENST00000526280 FEZF1A0PJY2 475 aa12.36□□□□□ -0.43
SMPD1-202ENST00000526280 LRRC14BA6NHZ5 514 aa12.36□□□□□ -0.43
SMPD1-202ENST00000526280 STX16-NPEPL1H3BU86 382 aa12.36□□□□□ -0.43
SMPD1-202ENST00000526280 COPEO14579 308 aa12.36□□□□□ -0.43
SMPD1-202ENST00000526280 STX16O14662 325 aa12.36□□□□□ -0.43
SMPD1-202ENST00000526280 CLGNO14967 610 aa12.36□□□□□ -0.43
SMPD1-202ENST00000526280 RGS16O15492 202 aaPredicted RBP12.36□□□□□ -0.43
SMPD1-202ENST00000526280 LCMT2O60294 686 aaKnown RBP12.36□□□□□ -0.43
SMPD1-202ENST00000526280 RAD1O60671 282 aa12.36□□□□□ -0.43
SMPD1-202ENST00000526280 PRAMEF4O60810 478 aa12.36□□□□□ -0.43
SMPD1-202ENST00000526280 CPNE3O75131 537 aaKnown RBP12.36□□□□□ -0.43
SMPD1-202ENST00000526280 SIX3O95343 332 aaPredicted RBP12.36□□□□□ -0.43
SMPD1-202ENST00000526280 HBQ1P09105 142 aa12.36□□□□□ -0.43
SMPD1-202ENST00000526280 C1GALT1C1LP0DN25 315 aa12.36□□□□□ -0.43
SMPD1-202ENST00000526280 TAC1P20366 129 aa12.36□□□□□ -0.43
SMPD1-202ENST00000526280 GCGRP47871 477 aa12.36□□□□□ -0.43
SMPD1-202ENST00000526280 REEP5Q00765 189 aa12.36□□□□□ -0.43
SMPD1-202ENST00000526280 MEF2AQ02078 507 aaPredicted RBP12.36□□□□□ -0.43
SMPD1-202ENST00000526280 PCDH1Q08174 1060 aa12.36□□□□□ -0.43
SMPD1-202ENST00000526280 CLN3Q13286 438 aa12.36□□□□□ -0.43
SMPD1-202ENST00000526280 TGIF1Q15583 401 aa12.36□□□□□ -0.43
SMPD1-202ENST00000526280 PRTGQ2VWP7 1150 aa12.36□□□□□ -0.43
SMPD1-202ENST00000526280 PRAMEF9Q5VWM5 478 aa12.36□□□□□ -0.43
SMPD1-202ENST00000526280 ATG9BQ674R7 924 aa12.36□□□□□ -0.43
SMPD1-202ENST00000526280 C6orf15Q6UXA7 325 aaPredicted RBP12.36□□□□□ -0.43
SMPD1-202ENST00000526280 CROCCP2Q86T23 111 aa12.36□□□□□ -0.43
SMPD1-202ENST00000526280 TMPRSS11BQ86T26 416 aa12.36□□□□□ -0.43
SMPD1-202ENST00000526280 SRRM1Q8IYB3 904 aaKnown RBP12.36□□□□□ -0.43
SMPD1-202ENST00000526280 NLGN4XQ8N0W4 816 aa12.36□□□□□ -0.43
SMPD1-202ENST00000526280 ESX1Q8N693 406 aa12.36□□□□□ -0.43
SMPD1-202ENST00000526280 BANPQ8N9N5 519 aa12.36□□□□□ -0.43
SMPD1-202ENST00000526280 GALNT6Q8NCL4 622 aa12.36□□□□□ -0.43
SMPD1-202ENST00000526280 ZNF740Q8NDX6 193 aa12.36□□□□□ -0.43
SMPD1-202ENST00000526280 NLGN4YQ8NFZ3 816 aaPredicted RBP12.36□□□□□ -0.43
SMPD1-202ENST00000526280 KCNE4Q8WWG9 221 aa12.36□□□□□ -0.43
SMPD1-202ENST00000526280 NKD1Q969G9 470 aa12.36□□□□□ -0.43
SMPD1-202ENST00000526280 RERGQ96A58 199 aaPredicted RBP12.36□□□□□ -0.43
SMPD1-202ENST00000526280 WDR34Q96EX3 536 aa12.36□□□□□ -0.43
SMPD1-202ENST00000526280 LRFN5Q96NI6 719 aa12.36□□□□□ -0.43
SMPD1-202ENST00000526280 SH3GL2Q99962 352 aa12.36□□□□□ -0.43
SMPD1-202ENST00000526280 AIF1LQ9BQI0 150 aa12.36□□□□□ -0.43
SMPD1-202ENST00000526280 DPH1Q9BZG8 443 aa12.36□□□□□ -0.43
SMPD1-202ENST00000526280 SPNS1Q9H2V7 528 aa12.36□□□□□ -0.43
SMPD1-202ENST00000526280 EHD1Q9H4M9 534 aa12.36□□□□□ -0.43
SMPD1-202ENST00000526280 STARD5Q9NSY2 213 aa12.36□□□□□ -0.43
SMPD1-202ENST00000526280 IRAK4Q9NWZ3 460 aa12.36□□□□□ -0.43
SMPD1-202ENST00000526280 MKS1Q9NXB0 559 aa12.36□□□□□ -0.43
SMPD1-202ENST00000526280 ZMIZ1Q9ULJ6 1067 aa12.36□□□□□ -0.43
SMPD1-202ENST00000526280 PCDHGA4Q9Y5G9 962 aa12.36□□□□□ -0.43
SMPD1-202ENST00000526280 ANKRD11Q6UB99 2663 aaPredicted RBP12.35□□□□□ -0.43
SMPD1-202ENST00000526280 A8MT66 165 aa12.35□□□□□ -0.43
SMPD1-202ENST00000526280 E2F3O00716 465 aa12.35□□□□□ -0.43
SMPD1-202ENST00000526280 RRP8O43159 456 aaKnown RBP12.35□□□□□ -0.43
SMPD1-202ENST00000526280 DLX3O60479 287 aa12.35□□□□□ -0.43
SMPD1-202ENST00000526280 PLIN3O60664 434 aa12.35□□□□□ -0.43
SMPD1-202ENST00000526280 H2AFYO75367 372 aaKnown RBP12.35□□□□□ -0.43
SMPD1-202ENST00000526280 PROCP04070 461 aa12.35□□□□□ -0.43
SMPD1-202ENST00000526280 EIF2S1P05198 315 aaKnown RBP12.35□□□□□ -0.43
SMPD1-202ENST00000526280 EPB42P16452 691 aa12.35□□□□□ -0.43
SMPD1-202ENST00000526280 ATP5F1P24539 256 aaPredicted RBP12.35□□□□□ -0.43
SMPD1-202ENST00000526280 VARSP26640 1264 aaKnown RBP12.35□□□□□ -0.43
SMPD1-202ENST00000526280 EEF1DP29692 281 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms