RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 C1QTNF3Q9BXJ4 246 aa16.6■□□□□ 0.25
CCS-204ENST00000526066 CD244Q9BZW8 370 aa16.6■□□□□ 0.25
CCS-204ENST00000526066 PCBD2Q9H0N5 130 aa16.6■□□□□ 0.25
CCS-204ENST00000526066 FBXO8Q9NRD0 319 aa16.6■□□□□ 0.25
CCS-204ENST00000526066 OXSMQ9NWU1 459 aa16.6■□□□□ 0.25
CCS-204ENST00000526066 MAN2B2Q9Y2E5 1009 aa16.6■□□□□ 0.25
CCS-204ENST00000526066 LOC101059948A0A1B0GTJ6 334 aa16.59■□□□□ 0.25
CCS-204ENST00000526066 OR6C74A6NCV1 312 aa16.59■□□□□ 0.25
CCS-204ENST00000526066 OR5K3A6NET4 321 aa16.59■□□□□ 0.25
CCS-204ENST00000526066 MKRN2OSH3BPM6 223 aa16.59■□□□□ 0.25
CCS-204ENST00000526066 BTN3A3O00478 584 aa16.59■□□□□ 0.25
CCS-204ENST00000526066 POLR1CO15160 346 aaPredicted RBP16.59■□□□□ 0.25
CCS-204ENST00000526066 PRICKLE3O43900 615 aaPredicted RBP16.59■□□□□ 0.25
CCS-204ENST00000526066 STK16O75716 305 aa16.59■□□□□ 0.25
CCS-204ENST00000526066 BPGMP07738 259 aa16.59■□□□□ 0.25
CCS-204ENST00000526066 CHRM5P08912 532 aaPredicted RBP16.59■□□□□ 0.25
CCS-204ENST00000526066 CAPZBP47756 277 aa16.59■□□□□ 0.25
CCS-204ENST00000526066 WDR4P57081 412 aaKnown RBP16.59■□□□□ 0.25
CCS-204ENST00000526066 NAA20P61599 178 aa16.59■□□□□ 0.25
CCS-204ENST00000526066 TBPL1P62380 186 aa16.59■□□□□ 0.25
CCS-204ENST00000526066 ASPHQ12797 758 aa16.59■□□□□ 0.25
CCS-204ENST00000526066 NAE1Q13564 534 aa16.59■□□□□ 0.25
CCS-204ENST00000526066 KIR2DS3Q14952 304 aa16.59■□□□□ 0.25
CCS-204ENST00000526066 PTCHD3Q3KNS1 767 aa16.59■□□□□ 0.25
CCS-204ENST00000526066 HHATQ5VTY9 493 aa16.59■□□□□ 0.25
CCS-204ENST00000526066 CAPN13Q6MZZ7 669 aaPredicted RBP16.59■□□□□ 0.25
CCS-204ENST00000526066 LRRC70Q7Z2Q7 622 aa16.59■□□□□ 0.25
CCS-204ENST00000526066 ARFGAP2Q8N6H7 521 aa16.59■□□□□ 0.25
CCS-204ENST00000526066 BMPERQ8N8U9 685 aa16.59■□□□□ 0.25
CCS-204ENST00000526066 TEX19Q8NA77 164 aa16.59■□□□□ 0.25
CCS-204ENST00000526066 SLC22A18Q96BI1 424 aa16.59■□□□□ 0.25
CCS-204ENST00000526066 PHF21BQ96EK2 531 aa16.59■□□□□ 0.25
CCS-204ENST00000526066 L3HYPDHQ96EM0 354 aa16.59■□□□□ 0.25
CCS-204ENST00000526066 NRTNQ99748 197 aa16.59■□□□□ 0.25
CCS-204ENST00000526066 RAB33BQ9H082 229 aa16.59■□□□□ 0.25
CCS-204ENST00000526066 ATG10Q9H0Y0 220 aa16.59■□□□□ 0.25
CCS-204ENST00000526066 CCDC177Q9NQR7 707 aaPredicted RBP16.59■□□□□ 0.25
CCS-204ENST00000526066 OGFRQ9NZT2 677 aa16.59■□□□□ 0.25
CCS-204ENST00000526066 PDP2Q9P2J9 529 aa16.59■□□□□ 0.25
CCS-204ENST00000526066 EPHA6Q9UF33 1036 aa16.59■□□□□ 0.25
CCS-204ENST00000526066 A0A1W2PPV9 198 aa16.58■□□□□ 0.24
CCS-204ENST00000526066 PIPSLA2A3N6 862 aa16.58■□□□□ 0.24
CCS-204ENST00000526066 FKBP9O95302 570 aa16.58■□□□□ 0.24
CCS-204ENST00000526066 AMD1P17707 334 aa16.58■□□□□ 0.24
CCS-204ENST00000526066 IMPDH1P20839 514 aa16.58■□□□□ 0.24
CCS-204ENST00000526066 OAS2P29728 719 aaKnown RBP16.58■□□□□ 0.24
CCS-204ENST00000526066 ALDH3A1P30838 453 aa16.58■□□□□ 0.24
CCS-204ENST00000526066 HSPA7P48741 367 aa16.58■□□□□ 0.24
CCS-204ENST00000526066 AGTR2P50052 363 aa16.58■□□□□ 0.24
CCS-204ENST00000526066 HERVK_113P63132 956 aa16.58■□□□□ 0.24
CCS-204ENST00000526066 PRKAA1Q13131 559 aa16.58■□□□□ 0.24
CCS-204ENST00000526066 FASTKQ14296 549 aaKnown RBP16.58■□□□□ 0.24
CCS-204ENST00000526066 C4orf17Q53FE4 359 aa16.58■□□□□ 0.24
CCS-204ENST00000526066 LIPMQ5VYY2 423 aa16.58■□□□□ 0.24
CCS-204ENST00000526066 C10orf107Q8IVU9 208 aa16.58■□□□□ 0.24
CCS-204ENST00000526066 PPFIBP2Q8ND30 876 aa16.58■□□□□ 0.24
CCS-204ENST00000526066 SREK1Q8WXA9 508 aaKnown RBP16.58■□□□□ 0.24
CCS-204ENST00000526066 ERVK-6Q9BXR3 956 aa16.58■□□□□ 0.24
CCS-204ENST00000526066 HRASLS2Q9NWW9 162 aa16.58■□□□□ 0.24
CCS-204ENST00000526066 KLHL3Q9UH77 587 aa16.58■□□□□ 0.24
CCS-204ENST00000526066 TMEM184BQ9Y519 407 aaPredicted RBP16.58■□□□□ 0.24
CCS-204ENST00000526066 C2orf74A8MZ97 194 aa16.57■□□□□ 0.24
CCS-204ENST00000526066 K7EPI3 171 aa16.57■□□□□ 0.24
CCS-204ENST00000526066 TRIM13O60858 407 aa16.57■□□□□ 0.24
CCS-204ENST00000526066 RPS17P08708 135 aaKnown RBP16.57■□□□□ 0.24
CCS-204ENST00000526066 POLR2CP19387 275 aaPredicted RBP16.57■□□□□ 0.24
CCS-204ENST00000526066 PEBP1P30086 187 aaKnown RBP16.57■□□□□ 0.24
CCS-204ENST00000526066 PIK3CGP48736 1102 aa16.57■□□□□ 0.24
CCS-204ENST00000526066 C18orf21Q32NC0 220 aaPredicted RBP16.57■□□□□ 0.24
CCS-204ENST00000526066 CRTC2Q53ET0 693 aaPredicted RBP16.57■□□□□ 0.24
CCS-204ENST00000526066 ARMC6Q6NXE6 501 aa16.57■□□□□ 0.24
CCS-204ENST00000526066 LCTLQ6UWM7 567 aa16.57■□□□□ 0.24
CCS-204ENST00000526066 ARHGAP22Q7Z5H3 698 aa16.57■□□□□ 0.24
CCS-204ENST00000526066 THOC6Q86W42 341 aaKnown RBP16.57■□□□□ 0.24
CCS-204ENST00000526066 PLXDC1Q8IUK5 500 aa16.57■□□□□ 0.24
CCS-204ENST00000526066 RSC1A1Q92681 617 aa16.57■□□□□ 0.24
CCS-204ENST00000526066 MIPEPQ99797 713 aa16.57■□□□□ 0.24
CCS-204ENST00000526066 HAUS8Q9BT25 410 aa16.57■□□□□ 0.24
CCS-204ENST00000526066 ULBP3Q9BZM4 244 aa16.57■□□□□ 0.24
CCS-204ENST00000526066 DNAJC11Q9NVH1 559 aa16.57■□□□□ 0.24
CCS-204ENST00000526066 INTS7Q9NVH2 962 aaKnown RBP16.57■□□□□ 0.24
CCS-204ENST00000526066 SPHK1Q9NYA1 384 aa16.57■□□□□ 0.24
CCS-204ENST00000526066 ACTR10Q9NZ32 417 aa16.57■□□□□ 0.24
CCS-204ENST00000526066 OPTCQ9UBM4 332 aa16.57■□□□□ 0.24
CCS-204ENST00000526066 BLACEA4D250 179 aa16.56■□□□□ 0.24
CCS-204ENST00000526066 WDR47O94967 919 aa16.56■□□□□ 0.24
CCS-204ENST00000526066 SIX3O95343 332 aaPredicted RBP16.56■□□□□ 0.24
CCS-204ENST00000526066 CHN1P15882 459 aa16.56■□□□□ 0.24
CCS-204ENST00000526066 TYRP1P17643 537 aa16.56■□□□□ 0.24
CCS-204ENST00000526066 EEF1DP29692 281 aaKnown RBP16.56■□□□□ 0.24
CCS-204ENST00000526066 STAT5AP42229 794 aa16.56■□□□□ 0.24
CCS-204ENST00000526066 GDF5P43026 501 aa16.56■□□□□ 0.24
CCS-204ENST00000526066 ABATP80404 500 aa16.56■□□□□ 0.24
CCS-204ENST00000526066 FOXM1Q08050 763 aa16.56■□□□□ 0.24
CCS-204ENST00000526066 MAP7Q14244 749 aa16.56■□□□□ 0.24
CCS-204ENST00000526066 SLC5A12Q1EHB4 618 aa16.56■□□□□ 0.24
CCS-204ENST00000526066 ZNF678Q5SXM1 525 aa16.56■□□□□ 0.24
CCS-204ENST00000526066 PRAMEF13Q5VWM6 474 aa16.56■□□□□ 0.24
CCS-204ENST00000526066 SUSD1Q6UWL2 747 aa16.56■□□□□ 0.24
CCS-204ENST00000526066 NUDCD3Q8IVD9 361 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms