RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 MEX3BQ6ZN04 569 aaKnown RBP6.08□□□□□ -1.44
VPS13B-211ENST00000522802 FAM83HQ6ZRV2 1179 aaPredicted RBP6.08□□□□□ -1.44
VPS13B-211ENST00000522802 LINC00696Q6ZRV3 163 aa6.08□□□□□ -1.44
VPS13B-211ENST00000522802 CYP4V2Q6ZWL3 525 aaPredicted RBP6.08□□□□□ -1.44
VPS13B-211ENST00000522802 POLNQ7Z5Q5 900 aa6.08□□□□□ -1.44
VPS13B-211ENST00000522802 LRRTM4Q86VH4 590 aa6.08□□□□□ -1.44
VPS13B-211ENST00000522802 PPM1NQ8N819 430 aa6.08□□□□□ -1.44
VPS13B-211ENST00000522802 ACBD4Q8NC06 268 aa6.08□□□□□ -1.44
VPS13B-211ENST00000522802 C3orf20Q8ND61 904 aa6.08□□□□□ -1.44
VPS13B-211ENST00000522802 LPCAT1Q8NF37 534 aa6.08□□□□□ -1.44
VPS13B-211ENST00000522802 OR2Y1Q8NGV0 311 aa6.08□□□□□ -1.44
VPS13B-211ENST00000522802 EID2BQ96D98 161 aa6.08□□□□□ -1.44
VPS13B-211ENST00000522802 ZNF599Q96NL3 588 aa6.08□□□□□ -1.44
VPS13B-211ENST00000522802 IP6K3Q96PC2 410 aa6.08□□□□□ -1.44
VPS13B-211ENST00000522802 NRTNQ99748 197 aa6.08□□□□□ -1.44
VPS13B-211ENST00000522802 SMR3AQ99954 134 aa6.08□□□□□ -1.44
VPS13B-211ENST00000522802 MESP1Q9BRJ9 268 aa6.08□□□□□ -1.44
VPS13B-211ENST00000522802 ADI1Q9BV57 179 aa6.08□□□□□ -1.44
VPS13B-211ENST00000522802 SNRNP25Q9BV90 132 aaKnown RBP6.08□□□□□ -1.44
VPS13B-211ENST00000522802 SELENOOQ9BVL4 669 aa6.08□□□□□ -1.44
VPS13B-211ENST00000522802 TDRD1Q9BXT4 1180 aaKnown RBP6.08□□□□□ -1.44
VPS13B-211ENST00000522802 CXXC4Q9H2H0 198 aa6.08□□□□□ -1.44
VPS13B-211ENST00000522802 FAM83DQ9H4H8 585 aa6.08□□□□□ -1.44
VPS13B-211ENST00000522802 DHX35Q9H5Z1 703 aaKnown RBP6.08□□□□□ -1.44
VPS13B-211ENST00000522802 FANCEQ9HB96 536 aa6.08□□□□□ -1.44
VPS13B-211ENST00000522802 TRPS1Q9UHF7 1281 aa6.08□□□□□ -1.44
VPS13B-211ENST00000522802 PSMD13Q9UNM6 376 aa6.08□□□□□ -1.44
VPS13B-211ENST00000522802 CHKBQ9Y259 395 aa6.08□□□□□ -1.44
VPS13B-211ENST00000522802 RPH3AQ9Y2J0 694 aaPredicted RBP6.08□□□□□ -1.44
VPS13B-211ENST00000522802 CFAP20Q9Y6A4 193 aaKnown RBP6.08□□□□□ -1.44
VPS13B-211ENST00000522802 MXRA5Q9NR99 2828 aa6.08□□□□□ -1.44
VPS13B-211ENST00000522802 RTTNQ86VV8 2226 aa6.07□□□□□ -1.44
VPS13B-211ENST00000522802 OR6C74A6NCV1 312 aa6.07□□□□□ -1.44
VPS13B-211ENST00000522802 AGPSO00116 658 aa6.07□□□□□ -1.44
VPS13B-211ENST00000522802 KMOO15229 486 aa6.07□□□□□ -1.44
VPS13B-211ENST00000522802 ZNF749O43361 778 aa6.07□□□□□ -1.44
VPS13B-211ENST00000522802 HOXA3O43365 443 aaPredicted RBP6.07□□□□□ -1.44
VPS13B-211ENST00000522802 HCRTR1O43613 425 aa6.07□□□□□ -1.44
VPS13B-211ENST00000522802 KLHL41O60662 606 aa6.07□□□□□ -1.44
VPS13B-211ENST00000522802 SLC19A2O60779 497 aa6.07□□□□□ -1.44
VPS13B-211ENST00000522802 ITGA10O75578 1167 aa6.07□□□□□ -1.44
VPS13B-211ENST00000522802 SLC25A14O95258 325 aaPredicted RBP6.07□□□□□ -1.44
VPS13B-211ENST00000522802 CLDN14O95500 239 aa6.07□□□□□ -1.44
VPS13B-211ENST00000522802 MTHFD1P11586 935 aaKnown RBP6.07□□□□□ -1.44
VPS13B-211ENST00000522802 PVRP15151 417 aa6.07□□□□□ -1.44
VPS13B-211ENST00000522802 IDSP22304 550 aa6.07□□□□□ -1.44
VPS13B-211ENST00000522802 CRHR1P34998 444 aa6.07□□□□□ -1.44
VPS13B-211ENST00000522802 MSX2P35548 267 aaPredicted RBP6.07□□□□□ -1.44
VPS13B-211ENST00000522802 HADHAP40939 763 aa6.07□□□□□ -1.44
VPS13B-211ENST00000522802 EPHB1P54762 984 aa6.07□□□□□ -1.44
VPS13B-211ENST00000522802 AIF1P55008 147 aa6.07□□□□□ -1.44
VPS13B-211ENST00000522802 GSCP56915 257 aaPredicted RBP6.07□□□□□ -1.44
VPS13B-211ENST00000522802 LTBQ06643 244 aa6.07□□□□□ -1.44
VPS13B-211ENST00000522802 MGAT2Q10469 447 aa6.07□□□□□ -1.44
VPS13B-211ENST00000522802 GALNT3Q14435 633 aa6.07□□□□□ -1.44
VPS13B-211ENST00000522802 RPE65Q16518 533 aa6.07□□□□□ -1.44
VPS13B-211ENST00000522802 CAMK4Q16566 473 aa6.07□□□□□ -1.44
VPS13B-211ENST00000522802 C3AR1Q16581 482 aa6.07□□□□□ -1.44
VPS13B-211ENST00000522802 PPP6R3Q5H9R7 873 aaPredicted RBP6.07□□□□□ -1.44
VPS13B-211ENST00000522802 TMTC4Q5T4D3 741 aa6.07□□□□□ -1.44
VPS13B-211ENST00000522802 AGAP7PQ5VUJ5 663 aa6.07□□□□□ -1.44
VPS13B-211ENST00000522802 FAAH2Q6GMR7 532 aa6.07□□□□□ -1.44
VPS13B-211ENST00000522802 KLHL35Q6PF15 583 aa6.07□□□□□ -1.44
VPS13B-211ENST00000522802 XKRXQ6PP77 449 aa6.07□□□□□ -1.44
VPS13B-211ENST00000522802 WASH2PQ6VEQ5 465 aa6.07□□□□□ -1.44
VPS13B-211ENST00000522802 B4GALNT4Q76KP1 1039 aa6.07□□□□□ -1.44
VPS13B-211ENST00000522802 TAOK1Q7L7X3 1001 aa6.07□□□□□ -1.44
VPS13B-211ENST00000522802 OOSP2Q86WS3 158 aa6.07□□□□□ -1.44
VPS13B-211ENST00000522802 TRAPPC5Q8IUR0 188 aa6.07□□□□□ -1.44
VPS13B-211ENST00000522802 CREBRFQ8IUR6 639 aa6.07□□□□□ -1.44
VPS13B-211ENST00000522802 GPR26Q8NDV2 337 aa6.07□□□□□ -1.44
VPS13B-211ENST00000522802 OR5M3Q8NGP4 307 aa6.07□□□□□ -1.44
VPS13B-211ENST00000522802 OR1N1Q8NGS0 311 aa6.07□□□□□ -1.44
VPS13B-211ENST00000522802 GLYATL1Q969I3 302 aa6.07□□□□□ -1.44
VPS13B-211ENST00000522802 ZNF653Q96CK0 615 aa6.07□□□□□ -1.44
VPS13B-211ENST00000522802 CCDC34Q96HJ3 373 aa6.07□□□□□ -1.44
VPS13B-211ENST00000522802 AGAP4Q96P64 663 aa6.07□□□□□ -1.44
VPS13B-211ENST00000522802 PCDHB18PQ96TA0 734 aa6.07□□□□□ -1.44
VPS13B-211ENST00000522802 TREX2Q9BQ50 279 aaPredicted RBP6.07□□□□□ -1.44
VPS13B-211ENST00000522802 CNPY3Q9BT09 278 aa6.07□□□□□ -1.44
VPS13B-211ENST00000522802 NDC1Q9BTX1 674 aa6.07□□□□□ -1.44
VPS13B-211ENST00000522802 SPATA16Q9BXB7 569 aa6.07□□□□□ -1.44
VPS13B-211ENST00000522802 NAA15Q9BXJ9 866 aaKnown RBP6.07□□□□□ -1.44
VPS13B-211ENST00000522802 SLC7A5P2Q9GIP4 190 aa6.07□□□□□ -1.44
VPS13B-211ENST00000522802 VPS16Q9H269 839 aa6.07□□□□□ -1.44
VPS13B-211ENST00000522802 EPS8L2Q9H6S3 715 aa6.07□□□□□ -1.44
VPS13B-211ENST00000522802 BCO1Q9HAY6 547 aa6.07□□□□□ -1.44
VPS13B-211ENST00000522802 TCF7L1Q9HCS4 588 aa6.07□□□□□ -1.44
VPS13B-211ENST00000522802 NT5MQ9NPB1 228 aa6.07□□□□□ -1.44
VPS13B-211ENST00000522802 SAMSN1Q9NSI8 373 aaKnown RBP6.07□□□□□ -1.44
VPS13B-211ENST00000522802 IMP3Q9NV31 184 aaKnown RBP6.07□□□□□ -1.44
VPS13B-211ENST00000522802 ETNK2Q9NVF9 386 aa6.07□□□□□ -1.44
VPS13B-211ENST00000522802 HRASLS2Q9NWW9 162 aa6.07□□□□□ -1.44
VPS13B-211ENST00000522802 POMT2Q9UKY4 750 aa6.07□□□□□ -1.44
VPS13B-211ENST00000522802 HCFC1P51610 2035 aa6.07□□□□□ -1.44
VPS13B-211ENST00000522802 SNRNP200O75643 2136 aaKnown RBP6.07□□□□□ -1.44
VPS13B-211ENST00000522802 ZANQ9Y493 2812 aa6.06□□□□□ -1.44
VPS13B-211ENST00000522802 GPR89AB7ZAQ6 455 aa6.06□□□□□ -1.44
VPS13B-211ENST00000522802 E7EQ34 232 aa6.06□□□□□ -1.44
VPS13B-211ENST00000522802 H3BMH7 237 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms