RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 CCDC60Q8IWA6 550 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P1-201ENST00000522557 TDHQ8IZJ6 230 aa4.21□□□□□ -1.74
HMGB1P1-201ENST00000522557 LGI2Q8N0V4 545 aa4.21□□□□□ -1.74
HMGB1P1-201ENST00000522557 LPCAT1Q8NF37 534 aa4.21□□□□□ -1.74
HMGB1P1-201ENST00000522557 CKAP2Q8WWK9 683 aa4.21□□□□□ -1.74
HMGB1P1-201ENST00000522557 CCDC43Q96MW1 224 aaKnown RBP4.21□□□□□ -1.74
HMGB1P1-201ENST00000522557 TRAF4Q9BUZ4 470 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P1-201ENST00000522557 PRRG4Q9BZD6 226 aa4.21□□□□□ -1.74
HMGB1P1-201ENST00000522557 THAP2Q9H0W7 228 aa4.21□□□□□ -1.74
HMGB1P1-201ENST00000522557 ZDHHC6Q9H6R6 413 aa4.21□□□□□ -1.74
HMGB1P1-201ENST00000522557 KIAA1217Q5T5P2 1943 aa4.21□□□□□ -1.74
HMGB1P1-201ENST00000522557 SPAG9O60271 1321 aaKnown RBP4.21□□□□□ -1.74
HMGB1P1-201ENST00000522557 ACEP12821 1306 aa4.21□□□□□ -1.74
HMGB1P1-201ENST00000522557 IL16Q14005 1332 aa4.21□□□□□ -1.74
HMGB1P1-201ENST00000522557 C13orf42A0A1B0GVH6 325 aa4.2□□□□□ -1.74
HMGB1P1-201ENST00000522557 SERINC4A6NH21 518 aa4.2□□□□□ -1.74
HMGB1P1-201ENST00000522557 TMEM150CB9EJG8 249 aa4.2□□□□□ -1.74
HMGB1P1-201ENST00000522557 CAPN9O14815 690 aa4.2□□□□□ -1.74
HMGB1P1-201ENST00000522557 LINC01565O15544 149 aa4.2□□□□□ -1.74
HMGB1P1-201ENST00000522557 GPIP06744 558 aa4.2□□□□□ -1.74
HMGB1P1-201ENST00000522557 F3P13726 295 aa4.2□□□□□ -1.74
HMGB1P1-201ENST00000522557 STMN1P16949 149 aa4.2□□□□□ -1.74
HMGB1P1-201ENST00000522557 CDH3P22223 829 aa4.2□□□□□ -1.74
HMGB1P1-201ENST00000522557 SLC12A3P55017 1021 aa4.2□□□□□ -1.74
HMGB1P1-201ENST00000522557 UCP2P55851 309 aa4.2□□□□□ -1.74
HMGB1P1-201ENST00000522557 GCNT1Q02742 428 aa4.2□□□□□ -1.74
HMGB1P1-201ENST00000522557 IL10RBQ08334 325 aa4.2□□□□□ -1.74
HMGB1P1-201ENST00000522557 SRSF9Q13242 221 aaKnown RBP eCLIP4.2□□□□□ -1.74
HMGB1P1-201ENST00000522557 MSLNQ13421 630 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P1-201ENST00000522557 NONOQ15233 471 aaKnown RBP eCLIP4.2□□□□□ -1.74
HMGB1P1-201ENST00000522557 SLC25A53Q5H9E4 307 aa4.2□□□□□ -1.74
HMGB1P1-201ENST00000522557 WDR38Q5JTN6 314 aa4.2□□□□□ -1.74
HMGB1P1-201ENST00000522557 SLC35D3Q5M8T2 416 aa4.2□□□□□ -1.74
HMGB1P1-201ENST00000522557 AGAP6Q5VW22 663 aa4.2□□□□□ -1.74
HMGB1P1-201ENST00000522557 KCTD11Q693B1 232 aa4.2□□□□□ -1.74
HMGB1P1-201ENST00000522557 UGT3A1Q6NUS8 523 aa4.2□□□□□ -1.74
HMGB1P1-201ENST00000522557 C9orf139Q6ZV77 190 aa4.2□□□□□ -1.74
HMGB1P1-201ENST00000522557 PHLDB2Q86SQ0 1253 aa4.2□□□□□ -1.74
HMGB1P1-201ENST00000522557 CCDC83Q8IWF9 413 aa4.2□□□□□ -1.74
HMGB1P1-201ENST00000522557 KLHDC1Q8N7A1 406 aa4.2□□□□□ -1.74
HMGB1P1-201ENST00000522557 PIK3R3Q92569 461 aa4.2□□□□□ -1.74
HMGB1P1-201ENST00000522557 CD101Q93033 1021 aa4.2□□□□□ -1.74
HMGB1P1-201ENST00000522557 THOC1Q96FV9 657 aaKnown RBP4.2□□□□□ -1.74
HMGB1P1-201ENST00000522557 C5orf30Q96GV9 206 aa4.2□□□□□ -1.74
HMGB1P1-201ENST00000522557 CDHR1Q96JP9 859 aa4.2□□□□□ -1.74
HMGB1P1-201ENST00000522557 C4orf45Q96LM5 186 aa4.2□□□□□ -1.74
HMGB1P1-201ENST00000522557 ZNF583Q96ND8 569 aa4.2□□□□□ -1.74
HMGB1P1-201ENST00000522557 TSSK2Q96PF2 358 aa4.2□□□□□ -1.74
HMGB1P1-201ENST00000522557 MIS12Q9H081 205 aa4.2□□□□□ -1.74
HMGB1P1-201ENST00000522557 TSPYL1Q9H0U9 437 aa4.2□□□□□ -1.74
HMGB1P1-201ENST00000522557 SDCBP2Q9H190 292 aa4.2□□□□□ -1.74
HMGB1P1-201ENST00000522557 SNX25Q9H3E2 840 aa4.2□□□□□ -1.74
HMGB1P1-201ENST00000522557 C5orf66Q9H5L9 145 aa4.2□□□□□ -1.74
HMGB1P1-201ENST00000522557 FAM207AQ9NSI2 230 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P1-201ENST00000522557 ZFP57Q9NU63 452 aa4.2□□□□□ -1.74
HMGB1P1-201ENST00000522557 FLRT3Q9NZU0 649 aa4.2□□□□□ -1.74
HMGB1P1-201ENST00000522557 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P1-201ENST00000522557 A0A087X0K7 114 aa4.19□□□□□ -1.74
HMGB1P1-201ENST00000522557 A0A0U1RQG5 324 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P1-201ENST00000522557 GTPBP10A4D1E9 387 aaKnown RBP4.19□□□□□ -1.74
HMGB1P1-201ENST00000522557 ANKDD1BA6NHY2 528 aa4.19□□□□□ -1.74
HMGB1P1-201ENST00000522557 C19orf81C9J6K1 198 aa4.19□□□□□ -1.74
HMGB1P1-201ENST00000522557 NPIPA3F8WFD2 350 aa4.19□□□□□ -1.74
HMGB1P1-201ENST00000522557 LMX1BO60663 402 aa4.19□□□□□ -1.74
HMGB1P1-201ENST00000522557 DFFBO76075 338 aa4.19□□□□□ -1.74
HMGB1P1-201ENST00000522557 DDHD2O94830 711 aa4.19□□□□□ -1.74
HMGB1P1-201ENST00000522557 MYL6BP14649 208 aa4.19□□□□□ -1.74
HMGB1P1-201ENST00000522557 PIK3R1P27986 724 aa4.19□□□□□ -1.74
HMGB1P1-201ENST00000522557 IL15P40933 162 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P1-201ENST00000522557 FMO5P49326 533 aa4.19□□□□□ -1.74
HMGB1P1-201ENST00000522557 CLK1P49759 484 aaKnown RBP4.19□□□□□ -1.74
HMGB1P1-201ENST00000522557 NME5P56597 212 aa4.19□□□□□ -1.74
HMGB1P1-201ENST00000522557 OR1D5P58170 312 aa4.19□□□□□ -1.74
HMGB1P1-201ENST00000522557 TEFQ10587 303 aa4.19□□□□□ -1.74
HMGB1P1-201ENST00000522557 TRAP1Q12931 704 aaKnown RBP4.19□□□□□ -1.74
HMGB1P1-201ENST00000522557 STXBP2Q15833 593 aa4.19□□□□□ -1.74
HMGB1P1-201ENST00000522557 EXT1Q16394 746 aa4.19□□□□□ -1.74
HMGB1P1-201ENST00000522557 RBBP7Q16576 425 aa4.19□□□□□ -1.74
HMGB1P1-201ENST00000522557 IRAK1BP1Q5VVH5 260 aa4.19□□□□□ -1.74
HMGB1P1-201ENST00000522557 PIGZQ86VD9 579 aa4.19□□□□□ -1.74
HMGB1P1-201ENST00000522557 ANKRD46Q86W74 232 aa4.19□□□□□ -1.74
HMGB1P1-201ENST00000522557 NOA1Q8NC60 698 aaKnown RBP4.19□□□□□ -1.74
HMGB1P1-201ENST00000522557 TRIM58Q8NG06 486 aa4.19□□□□□ -1.74
HMGB1P1-201ENST00000522557 RBM41Q96IZ5 413 aaKnown RBP4.19□□□□□ -1.74
HMGB1P1-201ENST00000522557 PRAM1Q96QH2 718 aa4.19□□□□□ -1.74
HMGB1P1-201ENST00000522557 PRMT1Q99873 361 aaKnown RBP4.19□□□□□ -1.74
HMGB1P1-201ENST00000522557 MTMR12Q9C0I1 747 aa4.19□□□□□ -1.74
HMGB1P1-201ENST00000522557 PTTG2Q9NZH5 202 aa4.19□□□□□ -1.74
HMGB1P1-201ENST00000522557 PKD2L2Q9NZM6 624 aa4.19□□□□□ -1.74
HMGB1P1-201ENST00000522557 STX8Q9UNK0 236 aa4.19□□□□□ -1.74
HMGB1P1-201ENST00000522557 DHX29Q7Z478 1369 aaKnown RBP4.18□□□□□ -1.74
HMGB1P1-201ENST00000522557 ANTXRLA6NF34 631 aa4.18□□□□□ -1.74
HMGB1P1-201ENST00000522557 ANKRD61A6NGH8 418 aa4.18□□□□□ -1.74
HMGB1P1-201ENST00000522557 SLC9B1P1A6NJY1 282 aa4.18□□□□□ -1.74
HMGB1P1-201ENST00000522557 C16orf97H3BN30 126 aa4.18□□□□□ -1.74
HMGB1P1-201ENST00000522557 ATP9AO75110 1047 aa4.18□□□□□ -1.74
HMGB1P1-201ENST00000522557 GAS8-AS1O95177 125 aa4.18□□□□□ -1.74
HMGB1P1-201ENST00000522557 CXCL14O95715 111 aa4.18□□□□□ -1.74
HMGB1P1-201ENST00000522557 AMD1P17707 334 aa4.18□□□□□ -1.74
HMGB1P1-201ENST00000522557 CYP2A7P20853 494 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms