RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 MSL2Q9HCI7 577 aa3.82□□□□□ -1.8
SKP1-209ENST00000522552 GALNT9Q9HCQ5 603 aa3.82□□□□□ -1.8
SKP1-209ENST00000522552 Q9N2K0 584 aa3.82□□□□□ -1.8
SKP1-209ENST00000522552 DUSP22Q9NRW4 184 aa3.82□□□□□ -1.8
SKP1-209ENST00000522552 TMEM74BQ9NUR3 256 aa3.82□□□□□ -1.8
SKP1-209ENST00000522552 GAR1Q9NY12 217 aaKnown RBP3.82□□□□□ -1.8
SKP1-209ENST00000522552 EHD3Q9NZN3 535 aa3.82□□□□□ -1.8
SKP1-209ENST00000522552 TXNDC16Q9P2K2 825 aa3.82□□□□□ -1.8
SKP1-209ENST00000522552 ONECUT1Q9UBC0 465 aa3.82□□□□□ -1.8
SKP1-209ENST00000522552 SERGEFQ9UGK8 458 aa3.82□□□□□ -1.8
SKP1-209ENST00000522552 ACSL5Q9ULC5 683 aa3.82□□□□□ -1.8
SKP1-209ENST00000522552 FOXJ3Q9UPW0 622 aa3.82□□□□□ -1.8
SKP1-209ENST00000522552 NOX1Q9Y5S8 564 aa3.82□□□□□ -1.8
SKP1-209ENST00000522552 WNT6Q9Y6F9 365 aa3.82□□□□□ -1.8
SKP1-209ENST00000522552 CARMIL2Q6F5E8 1435 aa3.82□□□□□ -1.8
SKP1-209ENST00000522552 LOC100506127A0A0U1RQW1 187 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 FAM240BA0A1B0GVZ2 78 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 C9orf118A6NHY6 69 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 MARCH11A6NNE9 402 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 PDXKO00764 312 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 YY2O15391 372 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 YKT6O15498 198 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 NME2P1O60361 137 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 WBP4O75554 376 aaKnown RBP3.81□□□□□ -1.8
SKP1-209ENST00000522552 NFATC1O95644 943 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 CAPN1P07384 714 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 SLC2A3P11169 496 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 INSRRP14616 1297 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 B4GALT1P15291 398 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 JUNBP17275 347 aaPredicted RBP3.81□□□□□ -1.8
SKP1-209ENST00000522552 ARRB2P32121 409 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 EIF2S3P41091 472 aaKnown RBP3.81□□□□□ -1.8
SKP1-209ENST00000522552 GRIA1P42261 906 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 SLC9A3P48764 834 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 CEBPDP49716 269 aaPredicted RBP3.81□□□□□ -1.8
SKP1-209ENST00000522552 SIM1P81133 766 aaPredicted RBP3.81□□□□□ -1.8
SKP1-209ENST00000522552 CAP1Q01518 475 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 TROAPQ12815 778 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 SELPLGQ14242 412 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 SSX2Q16385 188 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 KCNMB1Q16558 191 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 Q3ZCU0 254 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 GPAT3Q53EU6 434 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 CMPK2Q5EBM0 449 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 SPANXN2Q5MJ10 180 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 PIP5KL1Q5T9C9 394 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 IL23RQ5VWK5 629 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 TTC23Q5W5X9 447 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 GGNBP1Q5YKI7 109 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 NAIF1Q69YI7 327 aaPredicted RBP3.81□□□□□ -1.8
SKP1-209ENST00000522552 PDPK2PQ6A1A2 396 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 ASPHD2Q6ICH7 369 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 LCN10Q6JVE6 187 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 KIAA1161Q6NSJ0 714 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 METTL2BQ6P1Q9 378 aaKnown RBP3.81□□□□□ -1.8
SKP1-209ENST00000522552 KDM7AQ6ZMT4 941 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 DCDC5Q6ZRR9 648 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 GDF7Q7Z4P5 450 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 SERPINA11Q86U17 422 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 COMTD1Q86VU5 262 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 TMPRSS12Q86WS5 348 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 FAM131BQ86XD5 332 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 ZSWIM9Q86XI8 627 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 LRRC75A-AS1Q8N1F1 130 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 ZNF276Q8N554 614 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 SCCPDHQ8NBX0 429 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 ZNF397Q8NF99 534 aaPredicted RBP3.81□□□□□ -1.8
SKP1-209ENST00000522552 CMASQ8NFW8 434 aaPredicted RBP3.81□□□□□ -1.8
SKP1-209ENST00000522552 U2AF1L4Q8WU68 220 aaKnown RBP3.81□□□□□ -1.8
SKP1-209ENST00000522552 PROX1Q92786 737 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 METTL2AQ96IZ6 378 aaKnown RBP3.81□□□□□ -1.8
SKP1-209ENST00000522552 C8orf76Q96K31 380 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 ZNF48Q96MX3 618 aaPredicted RBP3.81□□□□□ -1.8
SKP1-209ENST00000522552 NPAS2Q99743 824 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 BPIFA3Q9BQP9 254 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 THAP7Q9BT49 309 aaPredicted RBP3.81□□□□□ -1.8
SKP1-209ENST00000522552 TMEM43Q9BTV4 400 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 TM6SF1Q9BZW5 370 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 KCNN2Q9H2S1 579 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 ZDHHC6Q9H6R6 413 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 DCLRE1BQ9H816 532 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 CYP3A43Q9HB55 503 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 MMP25Q9NPA2 562 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 TRPM5Q9NZQ8 1165 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 NTMQ9P121 344 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 VPS54Q9P1Q0 977 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 KLHL9Q9P2J3 617 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 PCDHA7Q9UN72 937 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 C15orf41Q9Y2V0 281 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 ATG4BQ9Y4P1 393 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 KLK4Q9Y5K2 254 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 ZHX2Q9Y6X8 837 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.81□□□□□ -1.8
SKP1-209ENST00000522552 UNC13AQ9UPW8 1703 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 KIF27Q86VH2 1401 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 MYOCOSA0A1B0GUC4 107 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 F8W810 466 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 K7ERQ8 282 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 RRP8O43159 456 aaKnown RBP3.81□□□□□ -1.8
SKP1-209ENST00000522552 KCNAB3O43448 404 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms