RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 PILRAQ9UKJ1 303 aa23.17■■□□□ 1.3
PVT1-212ENST00000521951 SPEGQ15772 3267 aa23.17■■□□□ 1.3
PVT1-212ENST00000521951 FEZF1A0PJY2 475 aa23.16■■□□□ 1.3
PVT1-212ENST00000521951 LCMT2O60294 686 aaKnown RBP23.16■■□□□ 1.3
PVT1-212ENST00000521951 ESRRBO95718 433 aa23.16■■□□□ 1.3
PVT1-212ENST00000521951 CXCR2P25025 360 aa23.16■■□□□ 1.3
PVT1-212ENST00000521951 GRK3P35626 688 aa23.16■■□□□ 1.3
PVT1-212ENST00000521951 HNF4AP41235 474 aa23.16■■□□□ 1.3
PVT1-212ENST00000521951 MLLT3P42568 568 aaPredicted RBP23.16■■□□□ 1.3
PVT1-212ENST00000521951 RELAQ04206 551 aa23.16■■□□□ 1.3
PVT1-212ENST00000521951 GALNT1Q10472 559 aaPredicted RBP23.16■■□□□ 1.3
PVT1-212ENST00000521951 LAPTM5Q13571 262 aa23.16■■□□□ 1.3
PVT1-212ENST00000521951 C16orf72Q14CZ0 275 aa23.16■■□□□ 1.3
PVT1-212ENST00000521951 GRHL2Q6ISB3 625 aa23.16■■□□□ 1.3
PVT1-212ENST00000521951 DNAJC22Q8N4W6 341 aa23.16■■□□□ 1.3
PVT1-212ENST00000521951 PRR11Q96HE9 360 aaPredicted RBP23.16■■□□□ 1.3
PVT1-212ENST00000521951 EML4Q9HC35 981 aaKnown RBP23.16■■□□□ 1.3
PVT1-212ENST00000521951 CLCA2Q9UQC9 943 aa23.16■■□□□ 1.3
PVT1-212ENST00000521951 KIF26BQ2KJY2 2108 aa23.16■■□□□ 1.3
PVT1-212ENST00000521951 KNTC1P50748 2209 aa23.15■■□□□ 1.3
PVT1-212ENST00000521951 TRBC2A0A5B9 178 aa23.15■■□□□ 1.3
PVT1-212ENST00000521951 TMX2-CTNND1H3BSU7 103 aa23.15■■□□□ 1.3
PVT1-212ENST00000521951 KLF11O14901 512 aa23.15■■□□□ 1.3
PVT1-212ENST00000521951 MAP3K7O43318 606 aa23.15■■□□□ 1.3
PVT1-212ENST00000521951 CSO75390 466 aaKnown RBP23.15■■□□□ 1.3
PVT1-212ENST00000521951 JUPP14923 745 aa23.15■■□□□ 1.3
PVT1-212ENST00000521951 EZRP15311 586 aaKnown RBP23.15■■□□□ 1.3
PVT1-212ENST00000521951 KCNAB1Q14722 419 aa23.15■■□□□ 1.3
PVT1-212ENST00000521951 GGTA1PQ4G0N0 100 aa23.15■■□□□ 1.3
PVT1-212ENST00000521951 PAGE2BQ5JRK9 111 aa23.15■■□□□ 1.3
PVT1-212ENST00000521951 CUZD1Q86UP6 607 aa23.15■■□□□ 1.3
PVT1-212ENST00000521951 KRT78Q8N1N4 520 aa23.15■■□□□ 1.3
PVT1-212ENST00000521951 LRRC8CQ8TDW0 803 aa23.15■■□□□ 1.3
PVT1-212ENST00000521951 GRAMD1AQ96CP6 724 aa23.15■■□□□ 1.3
PVT1-212ENST00000521951 MAGEB18Q96M61 343 aa23.15■■□□□ 1.3
PVT1-212ENST00000521951 FCRL4Q96PJ5 515 aa23.15■■□□□ 1.3
PVT1-212ENST00000521951 DEPDC7Q96QD5 511 aa23.15■■□□□ 1.3
PVT1-212ENST00000521951 SARGQ9BW04 601 aa23.15■■□□□ 1.3
PVT1-212ENST00000521951 TNFRSF12AQ9NP84 129 aa23.15■■□□□ 1.3
PVT1-212ENST00000521951 TRPS1Q9UHF7 1281 aa23.15■■□□□ 1.3
PVT1-212ENST00000521951 ZNF490Q9ULM2 529 aaPredicted RBP23.15■■□□□ 1.3
PVT1-212ENST00000521951 ADAMTS20P59510 1910 aa23.15■■□□□ 1.3
PVT1-212ENST00000521951 KCNE1BA0A087WTH5 132 aa23.14■■□□□ 1.3
PVT1-212ENST00000521951 A0A0J9YVX5 310 aa23.14■■□□□ 1.3
PVT1-212ENST00000521951 AGRPO00253 132 aa23.14■■□□□ 1.3
PVT1-212ENST00000521951 HCRTR1O43613 425 aa23.14■■□□□ 1.3
PVT1-212ENST00000521951 HSPA4LO95757 839 aa23.14■■□□□ 1.3
PVT1-212ENST00000521951 GABRA4P48169 554 aa23.14■■□□□ 1.3
PVT1-212ENST00000521951 CPSF6Q16630 551 aaKnown RBP eCLIP23.14■■□□□ 1.3
PVT1-212ENST00000521951 HIST2H2ACQ16777 129 aaPredicted RBP23.14■■□□□ 1.3
PVT1-212ENST00000521951 FAM219BQ5XKK7 198 aa23.14■■□□□ 1.3
PVT1-212ENST00000521951 HIST2H2AA3Q6FI13 130 aa23.14■■□□□ 1.3
PVT1-212ENST00000521951 RNF44Q7L0R7 432 aa23.14■■□□□ 1.3
PVT1-212ENST00000521951 ADAMTS14Q8WXS8 1223 aa23.14■■□□□ 1.3
PVT1-212ENST00000521951 ZFYVE21Q9BQ24 234 aa23.14■■□□□ 1.3
PVT1-212ENST00000521951 PITHD1Q9GZP4 211 aaPredicted RBP23.14■■□□□ 1.3
PVT1-212ENST00000521951 NT5DC2Q9H857 520 aa23.14■■□□□ 1.3
PVT1-212ENST00000521951 SYNPO2LQ9H987 977 aa23.14■■□□□ 1.3
PVT1-212ENST00000521951 HGSO14964 777 aaPredicted RBP23.13■■□□□ 1.29
PVT1-212ENST00000521951 OR1F1O43749 312 aa23.13■■□□□ 1.29
PVT1-212ENST00000521951 SNNO75324 88 aaPredicted RBP23.13■■□□□ 1.29
PVT1-212ENST00000521951 HGFP14210 728 aa23.13■■□□□ 1.29
PVT1-212ENST00000521951 CSTF2P33240 577 aaKnown RBP eCLIP23.13■■□□□ 1.29
PVT1-212ENST00000521951 MDH1P40925 334 aaKnown RBP23.13■■□□□ 1.29
PVT1-212ENST00000521951 BCL6P41182 706 aa23.13■■□□□ 1.29
PVT1-212ENST00000521951 RPS15AP62244 130 aaKnown RBP23.13■■□□□ 1.29
PVT1-212ENST00000521951 GUCY1A3Q02108 690 aa23.13■■□□□ 1.29
PVT1-212ENST00000521951 CYP4F3Q08477 520 aa23.13■■□□□ 1.29
PVT1-212ENST00000521951 RBBP5Q15291 538 aaKnown RBP23.13■■□□□ 1.29
PVT1-212ENST00000521951 ZC3H12BQ5HYM0 836 aaKnown RBP23.13■■□□□ 1.29
PVT1-212ENST00000521951 TMTC4Q5T4D3 741 aa23.13■■□□□ 1.29
PVT1-212ENST00000521951 TMIGD1Q6UXZ0 262 aa23.13■■□□□ 1.29
PVT1-212ENST00000521951 CDYL2Q8N8U2 506 aa23.13■■□□□ 1.29
PVT1-212ENST00000521951 MAGEB10Q96LZ2 347 aaPredicted RBP23.13■■□□□ 1.29
PVT1-212ENST00000521951 SORT1Q99523 831 aa23.13■■□□□ 1.29
PVT1-212ENST00000521951 STRADBQ9C0K7 418 aa23.13■■□□□ 1.29
PVT1-212ENST00000521951 THAP1Q9NVV9 213 aa23.13■■□□□ 1.29
PVT1-212ENST00000521951 CAPN1P07384 714 aa23.13■■□□□ 1.29
PVT1-212ENST00000521951 FOLR1P15328 257 aa23.13■■□□□ 1.29
PVT1-212ENST00000521951 SCTRP47872 440 aa23.13■■□□□ 1.29
PVT1-212ENST00000521951 ZRSR2Q15696 482 aaKnown RBP23.13■■□□□ 1.29
PVT1-212ENST00000521951 DEFB110Q30KQ9 67 aa23.13■■□□□ 1.29
PVT1-212ENST00000521951 MED27Q6P2C8 311 aa23.13■■□□□ 1.29
PVT1-212ENST00000521951 TMPRSS12Q86WS5 348 aa23.13■■□□□ 1.29
PVT1-212ENST00000521951 MCATQ8IVS2 390 aaKnown RBP23.13■■□□□ 1.29
PVT1-212ENST00000521951 CACTIN-AS1Q8N1I8 211 aa23.13■■□□□ 1.29
PVT1-212ENST00000521951 TBC1D19Q8N5T2 526 aa23.13■■□□□ 1.29
PVT1-212ENST00000521951 ANKRD53Q8N9V6 530 aa23.13■■□□□ 1.29
PVT1-212ENST00000521951 AGBL5Q8NDL9 886 aa23.13■■□□□ 1.29
PVT1-212ENST00000521951 OR2A5Q96R48 311 aa23.13■■□□□ 1.29
PVT1-212ENST00000521951 KCNA7Q96RP8 456 aa23.13■■□□□ 1.29
PVT1-212ENST00000521951 PCDHGA4Q9Y5G9 962 aa23.13■■□□□ 1.29
PVT1-212ENST00000521951 PTPRBP23467 1997 aa23.12■■□□□ 1.29
PVT1-212ENST00000521951 H0YIV9 168 aa23.12■■□□□ 1.29
PVT1-212ENST00000521951 FFAR3O14843 346 aa23.12■■□□□ 1.29
PVT1-212ENST00000521951 GPR42O15529 346 aa23.12■■□□□ 1.29
PVT1-212ENST00000521951 ENO1P06733 434 aaKnown RBP23.12■■□□□ 1.29
PVT1-212ENST00000521951 FOXA1P55317 472 aa23.12■■□□□ 1.29
PVT1-212ENST00000521951 FRMPD2BQ6IN97 320 aa23.12■■□□□ 1.29
PVT1-212ENST00000521951 LAS2Q8IYD9 372 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms