RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 VN1R4Q7Z5H5 301 aa19.68■□□□□ 0.74
TRIM35-203ENST00000521253 ARHGEF39Q8N4T4 335 aa19.68■□□□□ 0.74
TRIM35-203ENST00000521253 ABHD11Q8NFV4 315 aa19.68■□□□□ 0.74
TRIM35-203ENST00000521253 PTERQ96BW5 349 aa19.68■□□□□ 0.74
TRIM35-203ENST00000521253 FUT8Q9BYC5 575 aa19.68■□□□□ 0.74
TRIM35-203ENST00000521253 KCNE1BA0A087WTH5 132 aa19.67■□□□□ 0.74
TRIM35-203ENST00000521253 FEZF1A0PJY2 475 aa19.67■□□□□ 0.74
TRIM35-203ENST00000521253 TXNDC9O14530 226 aa19.67■□□□□ 0.74
TRIM35-203ENST00000521253 ALBP02768 609 aa19.67■□□□□ 0.74
TRIM35-203ENST00000521253 STATHP02808 62 aa19.67■□□□□ 0.74
TRIM35-203ENST00000521253 SLC35E2BP0CK96 405 aa19.67■□□□□ 0.74
TRIM35-203ENST00000521253 OTX2P32243 289 aa19.67■□□□□ 0.74
TRIM35-203ENST00000521253 BCL6P41182 706 aa19.67■□□□□ 0.74
TRIM35-203ENST00000521253 HNMTP50135 292 aa19.67■□□□□ 0.74
TRIM35-203ENST00000521253 CCR8P51685 355 aa19.67■□□□□ 0.74
TRIM35-203ENST00000521253 C19orf57Q0VDD7 668 aa19.67■□□□□ 0.74
TRIM35-203ENST00000521253 BMPR2Q13873 1038 aa19.67■□□□□ 0.74
TRIM35-203ENST00000521253 TGFBIQ15582 683 aa19.67■□□□□ 0.74
TRIM35-203ENST00000521253 OR4D1Q15615 310 aa19.67■□□□□ 0.74
TRIM35-203ENST00000521253 UAP1Q16222 522 aaPredicted RBP19.67■□□□□ 0.74
TRIM35-203ENST00000521253 NKG7Q16617 165 aa19.67■□□□□ 0.74
TRIM35-203ENST00000521253 MROH9Q5TGP6 573 aa19.67■□□□□ 0.74
TRIM35-203ENST00000521253 CPZQ66K79 652 aa19.67■□□□□ 0.74
TRIM35-203ENST00000521253 PRMT9Q6P2P2 845 aa19.67■□□□□ 0.74
TRIM35-203ENST00000521253 RAPH1Q70E73 1250 aa19.67■□□□□ 0.74
TRIM35-203ENST00000521253 THOC6Q86W42 341 aaKnown RBP19.67■□□□□ 0.74
TRIM35-203ENST00000521253 APLFQ8IW19 511 aaPredicted RBP19.67■□□□□ 0.74
TRIM35-203ENST00000521253 LRRN4CLQ8ND94 238 aa19.67■□□□□ 0.74
TRIM35-203ENST00000521253 NEIL2Q969S2 332 aa19.67■□□□□ 0.74
TRIM35-203ENST00000521253 RHBDF1Q96CC6 855 aa19.67■□□□□ 0.74
TRIM35-203ENST00000521253 TSNARE1Q96NA8 513 aa19.67■□□□□ 0.74
TRIM35-203ENST00000521253 TRIM55Q9BYV6 548 aa19.67■□□□□ 0.74
TRIM35-203ENST00000521253 SLC25A18Q9H1K4 315 aa19.67■□□□□ 0.74
TRIM35-203ENST00000521253 SLC26A1Q9H2B4 701 aa19.67■□□□□ 0.74
TRIM35-203ENST00000521253 ZNF304Q9HCX3 659 aa19.67■□□□□ 0.74
TRIM35-203ENST00000521253 CTSFQ9UBX1 484 aa19.67■□□□□ 0.74
TRIM35-203ENST00000521253 NFU1Q9UMS0 254 aa19.67■□□□□ 0.74
TRIM35-203ENST00000521253 SLC22A14Q9Y267 594 aa19.67■□□□□ 0.74
TRIM35-203ENST00000521253 ZNF462Q96JM2 2506 aa19.67■□□□□ 0.74
TRIM35-203ENST00000521253 COL6A6A6NMZ7 2263 aa19.67■□□□□ 0.74
TRIM35-203ENST00000521253 HMX2A2RU54 273 aa19.66■□□□□ 0.74
TRIM35-203ENST00000521253 NCF1BA6NI72 391 aaPredicted RBP19.66■□□□□ 0.74
TRIM35-203ENST00000521253 ARGFXA6NJG6 315 aa19.66■□□□□ 0.74
TRIM35-203ENST00000521253 NCF1CA8MVU1 366 aaPredicted RBP19.66■□□□□ 0.74
TRIM35-203ENST00000521253 LCMT2O60294 686 aaKnown RBP19.66■□□□□ 0.74
TRIM35-203ENST00000521253 RFPL1O75677 317 aa19.66■□□□□ 0.74
TRIM35-203ENST00000521253 DNAJB5O75953 348 aa19.66■□□□□ 0.74
TRIM35-203ENST00000521253 UMODP07911 640 aa19.66■□□□□ 0.74
TRIM35-203ENST00000521253 RHOXF2BP0C7M4 288 aa19.66■□□□□ 0.74
TRIM35-203ENST00000521253 NCF1P14598 390 aaPredicted RBP19.66■□□□□ 0.74
TRIM35-203ENST00000521253 CRABP2P29373 138 aa19.66■□□□□ 0.74
TRIM35-203ENST00000521253 MEF2AQ02078 507 aaPredicted RBP19.66■□□□□ 0.74
TRIM35-203ENST00000521253 CHAF1BQ13112 559 aa19.66■□□□□ 0.74
TRIM35-203ENST00000521253 SSPNQ14714 243 aa19.66■□□□□ 0.74
TRIM35-203ENST00000521253 C18orf21Q32NC0 220 aaPredicted RBP19.66■□□□□ 0.74
TRIM35-203ENST00000521253 CATSPEREQ5SY80 951 aa19.66■□□□□ 0.74
TRIM35-203ENST00000521253 GARNL3Q5VVW2 1013 aa19.66■□□□□ 0.74
TRIM35-203ENST00000521253 GPSM1Q86YR5 675 aa19.66■□□□□ 0.74
TRIM35-203ENST00000521253 RAB43Q86YS6 212 aa19.66■□□□□ 0.74
TRIM35-203ENST00000521253 IFT20Q8IY31 132 aa19.66■□□□□ 0.74
TRIM35-203ENST00000521253 OR4K1Q8NGD4 311 aa19.66■□□□□ 0.74
TRIM35-203ENST00000521253 SLC5A11Q8WWX8 675 aa19.66■□□□□ 0.74
TRIM35-203ENST00000521253 COL26A1Q96A83 441 aa19.66■□□□□ 0.74
TRIM35-203ENST00000521253 THAP11Q96EK4 314 aa19.66■□□□□ 0.74
TRIM35-203ENST00000521253 RHOXF2Q9BQY4 288 aa19.66■□□□□ 0.74
TRIM35-203ENST00000521253 WDR54Q9H977 334 aa19.66■□□□□ 0.74
TRIM35-203ENST00000521253 DYRK1BQ9Y463 629 aa19.66■□□□□ 0.74
TRIM35-203ENST00000521253 GRK3P35626 688 aa19.65■□□□□ 0.74
TRIM35-203ENST00000521253 SLC6A12P48065 614 aa19.65■□□□□ 0.74
TRIM35-203ENST00000521253 SNRPNP63162 240 aaKnown RBP19.65■□□□□ 0.74
TRIM35-203ENST00000521253 DLG1Q12959 904 aa19.65■□□□□ 0.74
TRIM35-203ENST00000521253 NFATC3Q12968 1075 aa19.65■□□□□ 0.74
TRIM35-203ENST00000521253 ATP1A4Q13733 1029 aa19.65■□□□□ 0.74
TRIM35-203ENST00000521253 MRGPREQ86SM8 312 aa19.65■□□□□ 0.74
TRIM35-203ENST00000521253 C9orf43Q8TAL5 461 aaPredicted RBP19.65■□□□□ 0.74
TRIM35-203ENST00000521253 KIAA1191Q96A73 305 aa19.65■□□□□ 0.74
TRIM35-203ENST00000521253 MVB12AQ96EY5 273 aa19.65■□□□□ 0.74
TRIM35-203ENST00000521253 ABHD17AQ96GS6 310 aa19.65■□□□□ 0.74
TRIM35-203ENST00000521253 SPSB2Q99619 263 aa19.65■□□□□ 0.74
TRIM35-203ENST00000521253 MACROD1Q9BQ69 325 aa19.65■□□□□ 0.74
TRIM35-203ENST00000521253 ING2Q9H160 280 aa19.65■□□□□ 0.74
TRIM35-203ENST00000521253 TLK1Q9UKI8 766 aa19.65■□□□□ 0.74
TRIM35-203ENST00000521253 MRPS2Q9Y399 296 aaKnown RBP19.65■□□□□ 0.74
TRIM35-203ENST00000521253 VSTM2BA6NLU5 285 aa19.64■□□□□ 0.73
TRIM35-203ENST00000521253 FOXS1O43638 330 aa19.64■□□□□ 0.73
TRIM35-203ENST00000521253 GDF5P43026 501 aa19.64■□□□□ 0.73
TRIM35-203ENST00000521253 CSRP3P50461 194 aa19.64■□□□□ 0.73
TRIM35-203ENST00000521253 SHISA6Q6ZSJ9 500 aa19.64■□□□□ 0.73
TRIM35-203ENST00000521253 TBC1D1Q86TI0 1168 aaPredicted RBP19.64■□□□□ 0.73
TRIM35-203ENST00000521253 KLHDC8AQ8IYD2 350 aa19.64■□□□□ 0.73
TRIM35-203ENST00000521253 MFSD9Q8NBP5 474 aa19.64■□□□□ 0.73
TRIM35-203ENST00000521253 ZNF740Q8NDX6 193 aa19.64■□□□□ 0.73
TRIM35-203ENST00000521253 SLC44A1Q8WWI5 657 aa19.64■□□□□ 0.73
TRIM35-203ENST00000521253 TM4SF19Q96DZ7 209 aa19.64■□□□□ 0.73
TRIM35-203ENST00000521253 SARGQ9BW04 601 aa19.64■□□□□ 0.73
TRIM35-203ENST00000521253 DRC3Q9H069 523 aa19.64■□□□□ 0.73
TRIM35-203ENST00000521253 SPNS1Q9H2V7 528 aa19.64■□□□□ 0.73
TRIM35-203ENST00000521253 SOX17Q9H6I2 414 aaPredicted RBP19.64■□□□□ 0.73
TRIM35-203ENST00000521253 ALG9Q9H6U8 611 aa19.64■□□□□ 0.73
TRIM35-203ENST00000521253 L2HGDHQ9H9P8 463 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms