RNA–Protein interactions for RNA: ENST00000520746.1

HDAC2-208, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-208ENST00000520746 COL1A1P02452 1464 aaPredicted RBP3.35□□□□□ -1.87
HDAC2-208ENST00000520746 EDDM13A0A1B0GTR0 161 aa3.34□□□□□ -1.87
HDAC2-208ENST00000520746 FEZF1A0PJY2 475 aa3.34□□□□□ -1.87
HDAC2-208ENST00000520746 PMS2P5A8MQ11 134 aa3.34□□□□□ -1.87
HDAC2-208ENST00000520746 GAPDHSO14556 408 aaPredicted RBP3.34□□□□□ -1.87
HDAC2-208ENST00000520746 CXCL11O14625 94 aa3.34□□□□□ -1.87
HDAC2-208ENST00000520746 TIMM44O43615 452 aa3.34□□□□□ -1.87
HDAC2-208ENST00000520746 DIAPH2O60879 1101 aa3.34□□□□□ -1.87
HDAC2-208ENST00000520746 IGHV4-38-2P0DP08 117 aa3.34□□□□□ -1.87
HDAC2-208ENST00000520746 MYBL1P10243 752 aa3.34□□□□□ -1.87
HDAC2-208ENST00000520746 CAPN2P17655 700 aa3.34□□□□□ -1.87
HDAC2-208ENST00000520746 CYP2B6P20813 491 aa3.34□□□□□ -1.87
HDAC2-208ENST00000520746 CPT2P23786 658 aa3.34□□□□□ -1.87
HDAC2-208ENST00000520746 MC5RP33032 325 aa3.34□□□□□ -1.87
HDAC2-208ENST00000520746 MTHFRP42898 656 aa3.34□□□□□ -1.87
HDAC2-208ENST00000520746 PPP5CP53041 499 aa3.34□□□□□ -1.87
HDAC2-208ENST00000520746 CSE1LP55060 971 aaKnown RBP3.34□□□□□ -1.87
HDAC2-208ENST00000520746 DCAF10Q5QP82 559 aa3.34□□□□□ -1.87
HDAC2-208ENST00000520746 RPUSD3Q6P087 351 aaKnown RBP3.34□□□□□ -1.87
HDAC2-208ENST00000520746 RBMS3Q6XE24 437 aaKnown RBP3.34□□□□□ -1.87
HDAC2-208ENST00000520746 C15orf52Q6ZUT6 534 aaKnown RBP3.34□□□□□ -1.87
HDAC2-208ENST00000520746 TRPT1Q86TN4 253 aaKnown RBP3.34□□□□□ -1.87
HDAC2-208ENST00000520746 IQCHQ86VS3 1027 aa3.34□□□□□ -1.87
HDAC2-208ENST00000520746 TTC30BQ8N4P2 665 aa3.34□□□□□ -1.87
HDAC2-208ENST00000520746 TRIML1Q8N9V2 468 aa3.34□□□□□ -1.87
HDAC2-208ENST00000520746 OR1J1Q8NGS3 322 aa3.34□□□□□ -1.87
HDAC2-208ENST00000520746 OR13J1Q8NGT2 312 aa3.34□□□□□ -1.87
HDAC2-208ENST00000520746 FAM151AQ8WW52 585 aa3.34□□□□□ -1.87
HDAC2-208ENST00000520746 TMEM143Q96AN5 459 aa3.34□□□□□ -1.87
HDAC2-208ENST00000520746 ZNF524Q96C55 264 aa3.34□□□□□ -1.87
HDAC2-208ENST00000520746 NSL1Q96IY1 281 aa3.34□□□□□ -1.87
HDAC2-208ENST00000520746 DUX3Q96PT4 197 aa3.34□□□□□ -1.87
HDAC2-208ENST00000520746 PUS3Q9BZE2 481 aaKnown RBP3.34□□□□□ -1.87
HDAC2-208ENST00000520746 ARRDC1-AS1Q9H2J1 176 aa3.34□□□□□ -1.87
HDAC2-208ENST00000520746 C11orf49Q9H6J7 331 aa3.34□□□□□ -1.87
HDAC2-208ENST00000520746 NOL11Q9H8H0 719 aaKnown RBP3.34□□□□□ -1.87
HDAC2-208ENST00000520746 ANKZF1Q9H8Y5 726 aa3.34□□□□□ -1.87
HDAC2-208ENST00000520746 PIH1D3Q9NQM4 214 aaKnown RBP3.34□□□□□ -1.87
HDAC2-208ENST00000520746 PRMT7Q9NVM4 692 aaPredicted RBP3.34□□□□□ -1.87
HDAC2-208ENST00000520746 WDR35Q9P2L0 1181 aa3.34□□□□□ -1.87
HDAC2-208ENST00000520746 IL17BQ9UHF5 180 aa3.34□□□□□ -1.87
HDAC2-208ENST00000520746 TCF19Q9Y242 345 aa3.34□□□□□ -1.87
HDAC2-208ENST00000520746 PADI2Q9Y2J8 665 aa3.34□□□□□ -1.87
HDAC2-208ENST00000520746 FAM205AQ6ZU69 1335 aa3.34□□□□□ -1.87
HDAC2-208ENST00000520746 MROH5Q6ZUA9 1318 aa3.34□□□□□ -1.87
HDAC2-208ENST00000520746 IGKV3D-20A0A0C4DH25 116 aa3.33□□□□□ -1.88
HDAC2-208ENST00000520746 TMEM221A6NGB7 291 aa3.33□□□□□ -1.88
HDAC2-208ENST00000520746 DNM1LO00429 736 aa3.33□□□□□ -1.88
HDAC2-208ENST00000520746 UBE2CO00762 179 aa3.33□□□□□ -1.88
HDAC2-208ENST00000520746 SPRY1O43609 319 aaPredicted RBP3.33□□□□□ -1.88
HDAC2-208ENST00000520746 EDIL3O43854 480 aa3.33□□□□□ -1.88
HDAC2-208ENST00000520746 GGPS1O95749 300 aa3.33□□□□□ -1.88
HDAC2-208ENST00000520746 INHBAP08476 426 aa3.33□□□□□ -1.88
HDAC2-208ENST00000520746 DANCRP0C864 163 aa3.33□□□□□ -1.88
HDAC2-208ENST00000520746 ZNF853P0CG23 659 aa3.33□□□□□ -1.88
HDAC2-208ENST00000520746 SMIM18P0DKX4 95 aa3.33□□□□□ -1.88
HDAC2-208ENST00000520746 LIFP15018 202 aa3.33□□□□□ -1.88
HDAC2-208ENST00000520746 PTPN3P26045 913 aa3.33□□□□□ -1.88
HDAC2-208ENST00000520746 SLC6A6P31641 620 aa3.33□□□□□ -1.88
HDAC2-208ENST00000520746 PCGF2P35227 344 aa3.33□□□□□ -1.88
HDAC2-208ENST00000520746 CDKN1AP38936 164 aa3.33□□□□□ -1.88
HDAC2-208ENST00000520746 PDX1P52945 283 aa3.33□□□□□ -1.88
HDAC2-208ENST00000520746 HNRNPKP61978 463 aaKnown RBP eCLIP3.33□□□□□ -1.88
HDAC2-208ENST00000520746 IRX3P78415 501 aaPredicted RBP3.33□□□□□ -1.88
HDAC2-208ENST00000520746 LGALS3BPQ08380 585 aa3.33□□□□□ -1.88
HDAC2-208ENST00000520746 RALGDSQ12967 914 aa3.33□□□□□ -1.88
HDAC2-208ENST00000520746 SPP2Q13103 211 aa3.33□□□□□ -1.88
HDAC2-208ENST00000520746 KYNUQ16719 465 aa3.33□□□□□ -1.88
HDAC2-208ENST00000520746 PHLDA2Q53GA4 152 aa3.33□□□□□ -1.88
HDAC2-208ENST00000520746 KLHL26Q53HC5 615 aa3.33□□□□□ -1.88
HDAC2-208ENST00000520746 KRT80Q6KB66 452 aa3.33□□□□□ -1.88
HDAC2-208ENST00000520746 CDC42EP5Q6NZY7 148 aa3.33□□□□□ -1.88
HDAC2-208ENST00000520746 CENPVQ7Z7K6 275 aaPredicted RBP3.33□□□□□ -1.88
HDAC2-208ENST00000520746 TMPRSS11BQ86T26 416 aa3.33□□□□□ -1.88
HDAC2-208ENST00000520746 DZIP1Q86YF9 867 aaKnown RBP3.33□□□□□ -1.88
HDAC2-208ENST00000520746 KRTAP7-1Q8IUC3 87 aa3.33□□□□□ -1.88
HDAC2-208ENST00000520746 TDRD5Q8NAT2 981 aaKnown RBP3.33□□□□□ -1.88
HDAC2-208ENST00000520746 OR6J1Q8NGC5 347 aa3.33□□□□□ -1.88
HDAC2-208ENST00000520746 FGFBP3Q8TAT2 258 aa3.33□□□□□ -1.88
HDAC2-208ENST00000520746 SNRNP27Q8WVK2 155 aaKnown RBP3.33□□□□□ -1.88
HDAC2-208ENST00000520746 IRGQQ8WZA9 623 aa3.33□□□□□ -1.88
HDAC2-208ENST00000520746 HSD17B8Q92506 261 aa3.33□□□□□ -1.88
HDAC2-208ENST00000520746 FBXO17Q96EF6 278 aa3.33□□□□□ -1.88
HDAC2-208ENST00000520746 LINC00615Q96LM1 132 aaPredicted RBP3.33□□□□□ -1.88
HDAC2-208ENST00000520746 SERINC2Q96SA4 455 aa3.33□□□□□ -1.88
HDAC2-208ENST00000520746 S1PR5Q9H228 398 aa3.33□□□□□ -1.88
HDAC2-208ENST00000520746 RABEP2Q9H5N1 569 aa3.33□□□□□ -1.88
HDAC2-208ENST00000520746 A4GALTQ9NPC4 353 aa3.33□□□□□ -1.88
HDAC2-208ENST00000520746 ADPRHL2Q9NX46 363 aa3.33□□□□□ -1.88
HDAC2-208ENST00000520746 ZNF624Q9P2J8 865 aaPredicted RBP3.33□□□□□ -1.88
HDAC2-208ENST00000520746 NFKBIL1Q9UBC1 381 aaPredicted RBP3.33□□□□□ -1.88
HDAC2-208ENST00000520746 MTUS1Q9ULD2 1270 aa3.33□□□□□ -1.88
HDAC2-208ENST00000520746 LAMB4A4D0S4 1761 aa3.33□□□□□ -1.88
HDAC2-208ENST00000520746 ANKRD36CQ5JPF3 1778 aa3.33□□□□□ -1.88
HDAC2-208ENST00000520746 URADA6NGE7 173 aa3.32□□□□□ -1.88
HDAC2-208ENST00000520746 TRIM77I1YAP6 450 aa3.32□□□□□ -1.88
HDAC2-208ENST00000520746 PCDH7O60245 1069 aa3.32□□□□□ -1.88
HDAC2-208ENST00000520746 SLCO2B1O94956 709 aa3.32□□□□□ -1.88
HDAC2-208ENST00000520746 WDPCPO95876 746 aa3.32□□□□□ -1.88
HDAC2-208ENST00000520746 ZNF883P0CG24 379 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms