RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 CACTIN-AS1Q8N1I8 211 aa17.07■□□□□ 0.32
SDC2-205ENST00000520233 D2HGDHQ8N465 521 aa17.07■□□□□ 0.32
SDC2-205ENST00000520233 TBC1D19Q8N5T2 526 aa17.07■□□□□ 0.32
SDC2-205ENST00000520233 DCBLD1Q8N8Z6 715 aa17.07■□□□□ 0.32
SDC2-205ENST00000520233 UBE2E3Q969T4 207 aa17.07■□□□□ 0.32
SDC2-205ENST00000520233 SPNS1Q9H2V7 528 aa17.07■□□□□ 0.32
SDC2-205ENST00000520233 FAM60AQ9NP50 221 aa17.07■□□□□ 0.32
SDC2-205ENST00000520233 PILRAQ9UKJ1 303 aa17.07■□□□□ 0.32
SDC2-205ENST00000520233 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.07■□□□□ 0.32
SDC2-205ENST00000520233 PCM1Q15154 2024 aa17.06■□□□□ 0.32
SDC2-205ENST00000520233 FRYLO94915 3013 aa17.06■□□□□ 0.32
SDC2-205ENST00000520233 KCNE1BA0A087WTH5 132 aa17.06■□□□□ 0.32
SDC2-205ENST00000520233 HGSO14964 777 aaPredicted RBP17.06■□□□□ 0.32
SDC2-205ENST00000520233 CTSVO60911 334 aa17.06■□□□□ 0.32
SDC2-205ENST00000520233 LYPLA1O75608 230 aaPredicted RBP17.06■□□□□ 0.32
SDC2-205ENST00000520233 ENO1P06733 434 aaKnown RBP17.06■□□□□ 0.32
SDC2-205ENST00000520233 HGFP14210 728 aa17.06■□□□□ 0.32
SDC2-205ENST00000520233 MLLT3P42568 568 aaPredicted RBP17.06■□□□□ 0.32
SDC2-205ENST00000520233 RPS15AP62244 130 aaKnown RBP17.06■□□□□ 0.32
SDC2-205ENST00000520233 GUCY1A3Q02108 690 aa17.06■□□□□ 0.32
SDC2-205ENST00000520233 ISXQ2M1V0 245 aa17.06■□□□□ 0.32
SDC2-205ENST00000520233 ZC3H12BQ5HYM0 836 aaKnown RBP17.06■□□□□ 0.32
SDC2-205ENST00000520233 TMTC4Q5T4D3 741 aa17.06■□□□□ 0.32
SDC2-205ENST00000520233 HES3Q5TGS1 186 aa17.06■□□□□ 0.32
SDC2-205ENST00000520233 MED27Q6P2C8 311 aa17.06■□□□□ 0.32
SDC2-205ENST00000520233 FBXO42Q6P3S6 717 aa17.06■□□□□ 0.32
SDC2-205ENST00000520233 MYLK4Q86YV6 388 aaPredicted RBP17.06■□□□□ 0.32
SDC2-205ENST00000520233 LAS2Q8IYD9 372 aa17.06■□□□□ 0.32
SDC2-205ENST00000520233 DNAJC22Q8N4W6 341 aa17.06■□□□□ 0.32
SDC2-205ENST00000520233 RCBTB1Q8NDN9 531 aa17.06■□□□□ 0.32
SDC2-205ENST00000520233 ZNF740Q8NDX6 193 aa17.06■□□□□ 0.32
SDC2-205ENST00000520233 THAP11Q96EK4 314 aa17.06■□□□□ 0.32
SDC2-205ENST00000520233 DEPDC7Q96QD5 511 aa17.06■□□□□ 0.32
SDC2-205ENST00000520233 SORT1Q99523 831 aa17.06■□□□□ 0.32
SDC2-205ENST00000520233 ZFYVE21Q9BQ24 234 aa17.06■□□□□ 0.32
SDC2-205ENST00000520233 SHCBP1LQ9BZQ2 653 aa17.06■□□□□ 0.32
SDC2-205ENST00000520233 C20orf27Q9GZN8 174 aa17.06■□□□□ 0.32
SDC2-205ENST00000520233 DLL3Q9NYJ7 618 aa17.06■□□□□ 0.32
SDC2-205ENST00000520233 FAM186AA6NE01 2351 aa17.06■□□□□ 0.32
SDC2-205ENST00000520233 COL27A1Q8IZC6 1860 aaPredicted RBP17.05■□□□□ 0.32
SDC2-205ENST00000520233 FEZF1A0PJY2 475 aa17.05■□□□□ 0.32
SDC2-205ENST00000520233 H0YIV9 168 aa17.05■□□□□ 0.32
SDC2-205ENST00000520233 LCMT2O60294 686 aaKnown RBP17.05■□□□□ 0.32
SDC2-205ENST00000520233 FGF4P08620 206 aa17.05■□□□□ 0.32
SDC2-205ENST00000520233 MSL3P1P0C860 447 aa17.05■□□□□ 0.32
SDC2-205ENST00000520233 SCTRP47872 440 aa17.05■□□□□ 0.32
SDC2-205ENST00000520233 GABRA4P48169 554 aa17.05■□□□□ 0.32
SDC2-205ENST00000520233 OCRLQ01968 901 aa17.05■□□□□ 0.32
SDC2-205ENST00000520233 RBBP5Q15291 538 aaKnown RBP17.05■□□□□ 0.32
SDC2-205ENST00000520233 CPSF6Q16630 551 aaKnown RBP eCLIP17.05■□□□□ 0.32
SDC2-205ENST00000520233 TMIGD1Q6UXZ0 262 aa17.05■□□□□ 0.32
SDC2-205ENST00000520233 PLD3Q8IV08 490 aa17.05■□□□□ 0.32
SDC2-205ENST00000520233 HOMEZQ8IX15 550 aa17.05■□□□□ 0.32
SDC2-205ENST00000520233 KIRREL3Q8IZU9 778 aa17.05■□□□□ 0.32
SDC2-205ENST00000520233 MFSD9Q8NBP5 474 aa17.05■□□□□ 0.32
SDC2-205ENST00000520233 REPS1Q96D71 796 aa17.05■□□□□ 0.32
SDC2-205ENST00000520233 SLC29A3Q9BZD2 475 aa17.05■□□□□ 0.32
SDC2-205ENST00000520233 STRADBQ9C0K7 418 aa17.05■□□□□ 0.32
SDC2-205ENST00000520233 ILKAPQ9H0C8 392 aaPredicted RBP17.05■□□□□ 0.32
SDC2-205ENST00000520233 CCDC134Q9H6E4 229 aa17.05■□□□□ 0.32
SDC2-205ENST00000520233 ZNF395Q9H8N7 513 aaPredicted RBP17.05■□□□□ 0.32
SDC2-205ENST00000520233 TNFRSF12AQ9NP84 129 aa17.05■□□□□ 0.32
SDC2-205ENST00000520233 HAO1Q9UJM8 370 aa17.05■□□□□ 0.32
SDC2-205ENST00000520233 ZNF490Q9ULM2 529 aaPredicted RBP17.05■□□□□ 0.32
SDC2-205ENST00000520233 CLCA2Q9UQC9 943 aa17.05■□□□□ 0.32
SDC2-205ENST00000520233 RAP2CQ9Y3L5 183 aa17.05■□□□□ 0.32
SDC2-205ENST00000520233 TSC22D4Q9Y3Q8 395 aa17.05■□□□□ 0.32
SDC2-205ENST00000520233 PCDHGA11Q9Y5H2 935 aa17.05■□□□□ 0.32
SDC2-205ENST00000520233 A0A0J9YVX5 310 aa17.04■□□□□ 0.32
SDC2-205ENST00000520233 DCDC2BA2VCK2 349 aa17.04■□□□□ 0.32
SDC2-205ENST00000520233 PCNX2A6NKB5 2137 aa17.04■□□□□ 0.32
SDC2-205ENST00000520233 OR1F1O43749 312 aa17.04■□□□□ 0.32
SDC2-205ENST00000520233 CSO75390 466 aaKnown RBP17.04■□□□□ 0.32
SDC2-205ENST00000520233 CAPN1P07384 714 aa17.04■□□□□ 0.32
SDC2-205ENST00000520233 UROSP10746 265 aa17.04■□□□□ 0.32
SDC2-205ENST00000520233 GSTM2P28161 218 aa17.04■□□□□ 0.32
SDC2-205ENST00000520233 HMOX2P30519 316 aa17.04■□□□□ 0.32
SDC2-205ENST00000520233 CSTF2P33240 577 aaKnown RBP eCLIP17.04■□□□□ 0.32
SDC2-205ENST00000520233 AHRP35869 848 aa17.04■□□□□ 0.32
SDC2-205ENST00000520233 BCL6P41182 706 aa17.04■□□□□ 0.32
SDC2-205ENST00000520233 CLDN6P56747 220 aa17.04■□□□□ 0.32
SDC2-205ENST00000520233 C16orf72Q14CZ0 275 aa17.04■□□□□ 0.32
SDC2-205ENST00000520233 ZRSR2Q15696 482 aaKnown RBP17.04■□□□□ 0.32
SDC2-205ENST00000520233 TMPRSS12Q86WS5 348 aa17.04■□□□□ 0.32
SDC2-205ENST00000520233 CLYBLQ8N0X4 340 aa17.04■□□□□ 0.32
SDC2-205ENST00000520233 CHCHD4Q8N4Q1 142 aa17.04■□□□□ 0.32
SDC2-205ENST00000520233 CDYL2Q8N8U2 506 aa17.04■□□□□ 0.32
SDC2-205ENST00000520233 AGBL5Q8NDL9 886 aa17.04■□□□□ 0.32
SDC2-205ENST00000520233 TTLQ8NG68 377 aa17.04■□□□□ 0.32
SDC2-205ENST00000520233 OR7G3Q8NG95 312 aa17.04■□□□□ 0.32
SDC2-205ENST00000520233 METTL6Q8TCB7 284 aa17.04■□□□□ 0.32
SDC2-205ENST00000520233 ADAMTS14Q8WXS8 1223 aa17.04■□□□□ 0.32
SDC2-205ENST00000520233 SEC16BQ96JE7 1060 aa17.04■□□□□ 0.32
SDC2-205ENST00000520233 OR2A5Q96R48 311 aa17.04■□□□□ 0.32
SDC2-205ENST00000520233 ZDHHC2Q9UIJ5 367 aa17.04■□□□□ 0.32
SDC2-205ENST00000520233 SNX6Q9UNH7 406 aa17.04■□□□□ 0.32
SDC2-205ENST00000520233 PLCL2Q9UPR0 1127 aa17.04■□□□□ 0.32
SDC2-205ENST00000520233 TRAF6Q9Y4K3 522 aa17.04■□□□□ 0.32
SDC2-205ENST00000520233 PCDHGA4Q9Y5G9 962 aa17.04■□□□□ 0.32
SDC2-205ENST00000520233 AP1M2Q9Y6Q5 423 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms