RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 SH2B3Q9UQQ2 575 aa13.96□□□□□ -0.17
CLN8-204ENST00000519254 TP53BP1Q12888 1972 aaPredicted RBP13.96□□□□□ -0.18
CLN8-204ENST00000519254 PRAMEF33A0A0G2JMD5 474 aa13.96□□□□□ -0.18
CLN8-204ENST00000519254 H0YIV9 168 aa13.96□□□□□ -0.18
CLN8-204ENST00000519254 CLGNO14967 610 aa13.96□□□□□ -0.18
CLN8-204ENST00000519254 BCAS2O75934 225 aaPredicted RBP13.96□□□□□ -0.18
CLN8-204ENST00000519254 MTHFD1P11586 935 aaKnown RBP13.96□□□□□ -0.18
CLN8-204ENST00000519254 BCKDHAP12694 445 aa13.96□□□□□ -0.18
CLN8-204ENST00000519254 F3P13726 295 aa13.96□□□□□ -0.18
CLN8-204ENST00000519254 TCN1P20061 433 aaPredicted RBP13.96□□□□□ -0.18
CLN8-204ENST00000519254 CNR2P34972 360 aa13.96□□□□□ -0.18
CLN8-204ENST00000519254 HNF4AP41235 474 aa13.96□□□□□ -0.18
CLN8-204ENST00000519254 SLC7A2P52569 658 aa13.96□□□□□ -0.18
CLN8-204ENST00000519254 PNLIPRP1P54315 467 aa13.96□□□□□ -0.18
CLN8-204ENST00000519254 SESN3P58005 492 aa13.96□□□□□ -0.18
CLN8-204ENST00000519254 SLCO4C1Q6ZQN7 724 aa13.96□□□□□ -0.18
CLN8-204ENST00000519254 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.96□□□□□ -0.18
CLN8-204ENST00000519254 ZBTB44Q8NCP5 570 aa13.96□□□□□ -0.18
CLN8-204ENST00000519254 NEIL2Q969S2 332 aa13.96□□□□□ -0.18
CLN8-204ENST00000519254 CMTM7Q96FZ5 175 aa13.96□□□□□ -0.18
CLN8-204ENST00000519254 IL17FQ96PD4 163 aa13.96□□□□□ -0.18
CLN8-204ENST00000519254 NRTNQ99748 197 aa13.96□□□□□ -0.18
CLN8-204ENST00000519254 GPRC5BQ9NZH0 403 aa13.96□□□□□ -0.18
CLN8-204ENST00000519254 STOML1Q9UBI4 398 aa13.96□□□□□ -0.18
CLN8-204ENST00000519254 ABCD2Q9UBJ2 740 aa13.96□□□□□ -0.18
CLN8-204ENST00000519254 SUSD2Q9UGT4 822 aa13.96□□□□□ -0.18
CLN8-204ENST00000519254 LEF1Q9UJU2 399 aaPredicted RBP13.96□□□□□ -0.18
CLN8-204ENST00000519254 SNX11Q9Y5W9 270 aa13.96□□□□□ -0.18
CLN8-204ENST00000519254 KCNE2Q9Y6J6 123 aa13.96□□□□□ -0.18
CLN8-204ENST00000519254 TDRD6O60522 2096 aaKnown RBP13.96□□□□□ -0.18
CLN8-204ENST00000519254 TNRC6BQ9UPQ9 1833 aaKnown RBP13.96□□□□□ -0.18
CLN8-204ENST00000519254 DYTNA2CJ06 578 aa13.95□□□□□ -0.18
CLN8-204ENST00000519254 NME4O00746 187 aa13.95□□□□□ -0.18
CLN8-204ENST00000519254 CFIP05156 583 aa13.95□□□□□ -0.18
CLN8-204ENST00000519254 SLC6A2P23975 617 aa13.95□□□□□ -0.18
CLN8-204ENST00000519254 VARSP26640 1264 aaKnown RBP13.95□□□□□ -0.18
CLN8-204ENST00000519254 ZNF33BQ06732 778 aa13.95□□□□□ -0.18
CLN8-204ENST00000519254 FLOT2Q14254 428 aa13.95□□□□□ -0.18
CLN8-204ENST00000519254 TRIM25Q14258 630 aaKnown RBP13.95□□□□□ -0.18
CLN8-204ENST00000519254 CAPRIN1Q14444 709 aaKnown RBP13.95□□□□□ -0.18
CLN8-204ENST00000519254 SAMD4BQ5PRF9 694 aaKnown RBP13.95□□□□□ -0.18
CLN8-204ENST00000519254 WLSQ5T9L3 541 aa13.95□□□□□ -0.18
CLN8-204ENST00000519254 CACHD1Q5VU97 1274 aa13.95□□□□□ -0.18
CLN8-204ENST00000519254 PRMT9Q6P2P2 845 aa13.95□□□□□ -0.18
CLN8-204ENST00000519254 ABRAXAS1Q6UWZ7 409 aa13.95□□□□□ -0.18
CLN8-204ENST00000519254 RNF111Q6ZNA4 994 aa13.95□□□□□ -0.18
CLN8-204ENST00000519254 SFTPA2Q8IWL1 248 aa13.95□□□□□ -0.18
CLN8-204ENST00000519254 SLC15A3Q8IY34 581 aa13.95□□□□□ -0.18
CLN8-204ENST00000519254 TBC1D21Q8IYX1 336 aa13.95□□□□□ -0.18
CLN8-204ENST00000519254 C2orf73Q8N5S3 287 aaPredicted RBP13.95□□□□□ -0.18
CLN8-204ENST00000519254 PATE1Q8WXA2 126 aa13.95□□□□□ -0.18
CLN8-204ENST00000519254 RAD51AP1Q96B01 352 aa13.95□□□□□ -0.18
CLN8-204ENST00000519254 CXorf40BQ96DE9 158 aa13.95□□□□□ -0.18
CLN8-204ENST00000519254 APIPQ96GX9 242 aa13.95□□□□□ -0.18
CLN8-204ENST00000519254 ZC3H10Q96K80 434 aaKnown RBP13.95□□□□□ -0.18
CLN8-204ENST00000519254 TACO1Q9BSH4 297 aaKnown RBP13.95□□□□□ -0.18
CLN8-204ENST00000519254 FSCN3Q9NQT6 498 aa13.95□□□□□ -0.18
CLN8-204ENST00000519254 SLAMF8Q9P0V8 285 aa13.95□□□□□ -0.18
CLN8-204ENST00000519254 GMPR2Q9P2T1 348 aaKnown RBP13.95□□□□□ -0.18
CLN8-204ENST00000519254 SUCOQ9UBS9 1254 aaKnown RBP13.95□□□□□ -0.18
CLN8-204ENST00000519254 DOLKQ9UPQ8 538 aa13.95□□□□□ -0.18
CLN8-204ENST00000519254 DLGAP4Q9Y2H0 992 aa13.95□□□□□ -0.18
CLN8-204ENST00000519254 PCDHGA2Q9Y5H1 932 aa13.95□□□□□ -0.18
CLN8-204ENST00000519254 HEATR5BQ9P2D3 2071 aa13.94□□□□□ -0.18
CLN8-204ENST00000519254 B4DGG1 531 aa13.94□□□□□ -0.18
CLN8-204ENST00000519254 DGKQP52824 942 aa13.94□□□□□ -0.18
CLN8-204ENST00000519254 FOXM1Q08050 763 aa13.94□□□□□ -0.18
CLN8-204ENST00000519254 CSTF3Q12996 717 aaKnown RBP13.94□□□□□ -0.18
CLN8-204ENST00000519254 NFYCQ13952 458 aa13.94□□□□□ -0.18
CLN8-204ENST00000519254 ELOCQ15369 112 aa13.94□□□□□ -0.18
CLN8-204ENST00000519254 WASH2PQ6VEQ5 465 aa13.94□□□□□ -0.18
CLN8-204ENST00000519254 SYT12Q8IV01 421 aa13.94□□□□□ -0.18
CLN8-204ENST00000519254 TRIM48Q8IWZ4 208 aa13.94□□□□□ -0.18
CLN8-204ENST00000519254 DPP10Q8N608 796 aa13.94□□□□□ -0.18
CLN8-204ENST00000519254 ZNF548Q8NEK5 533 aaPredicted RBP13.94□□□□□ -0.18
CLN8-204ENST00000519254 FAM46DQ8NEK8 389 aa13.94□□□□□ -0.18
CLN8-204ENST00000519254 JPH3Q8WXH2 748 aaPredicted RBP13.94□□□□□ -0.18
CLN8-204ENST00000519254 ASB9Q96DX5 294 aa13.94□□□□□ -0.18
CLN8-204ENST00000519254 WDR34Q96EX3 536 aa13.94□□□□□ -0.18
CLN8-204ENST00000519254 COL25A1Q9BXS0 654 aaPredicted RBP13.94□□□□□ -0.18
CLN8-204ENST00000519254 WASH6PQ9NQA3 447 aa13.94□□□□□ -0.18
CLN8-204ENST00000519254 CMTM6Q9NX76 183 aa13.94□□□□□ -0.18
CLN8-204ENST00000519254 SPASTQ9UBP0 616 aa13.94□□□□□ -0.18
CLN8-204ENST00000519254 ANGPTL2Q9UKU9 493 aa13.94□□□□□ -0.18
CLN8-204ENST00000519254 PCOLCE2Q9UKZ9 415 aa13.94□□□□□ -0.18
CLN8-204ENST00000519254 PCDHA9Q9Y5H5 950 aa13.94□□□□□ -0.18
CLN8-204ENST00000519254 HEBP2Q9Y5Z4 205 aa13.94□□□□□ -0.18
CLN8-204ENST00000519254 USP34Q70CQ2 3546 aa13.94□□□□□ -0.18
CLN8-204ENST00000519254 A6NCN8 305 aa13.94□□□□□ -0.18
CLN8-204ENST00000519254 H3BNX3 289 aa13.94□□□□□ -0.18
CLN8-204ENST00000519254 ERGP11308 486 aa13.94□□□□□ -0.18
CLN8-204ENST00000519254 AMD1P17707 334 aa13.94□□□□□ -0.18
CLN8-204ENST00000519254 HNRNPKP61978 463 aaKnown RBP eCLIP13.94□□□□□ -0.18
CLN8-204ENST00000519254 CATSPEREQ5SY80 951 aa13.94□□□□□ -0.18
CLN8-204ENST00000519254 ADNP2Q6IQ32 1131 aa13.94□□□□□ -0.18
CLN8-204ENST00000519254 SLC2A7Q6PXP3 512 aa13.94□□□□□ -0.18
CLN8-204ENST00000519254 LRRC74BQ6ZQY2 392 aa13.94□□□□□ -0.18
CLN8-204ENST00000519254 KRTCAP2Q8N6L1 136 aa13.94□□□□□ -0.18
CLN8-204ENST00000519254 BHLHE22Q8NFJ8 381 aaPredicted RBP13.94□□□□□ -0.18
CLN8-204ENST00000519254 CAMK1GQ96NX5 476 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms