RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 TLCD1Q96CP7 247 aa5.23□□□□□ -1.57
SCARNA16.4-201ENST00000516956 L3HYPDHQ96EM0 354 aa5.23□□□□□ -1.57
SCARNA16.4-201ENST00000516956 PRR11Q96HE9 360 aaPredicted RBP5.23□□□□□ -1.57
SCARNA16.4-201ENST00000516956 SLC41A2Q96JW4 573 aa5.23□□□□□ -1.57
SCARNA16.4-201ENST00000516956 FCRL4Q96PJ5 515 aa5.23□□□□□ -1.57
SCARNA16.4-201ENST00000516956 CTRCQ99895 268 aa5.23□□□□□ -1.57
SCARNA16.4-201ENST00000516956 C17orf62Q9BQA9 187 aa5.23□□□□□ -1.57
SCARNA16.4-201ENST00000516956 TMEM79Q9BSE2 394 aa5.23□□□□□ -1.57
SCARNA16.4-201ENST00000516956 MENTQ9BUN1 341 aa5.23□□□□□ -1.57
SCARNA16.4-201ENST00000516956 YIPF2Q9BWQ6 316 aa5.23□□□□□ -1.57
SCARNA16.4-201ENST00000516956 PITPNM3Q9BZ71 974 aa5.23□□□□□ -1.57
SCARNA16.4-201ENST00000516956 EHD1Q9H4M9 534 aa5.23□□□□□ -1.57
SCARNA16.4-201ENST00000516956 COPS7BQ9H9Q2 264 aaPredicted RBP5.23□□□□□ -1.57
SCARNA16.4-201ENST00000516956 MLXIPLQ9NP71 852 aa5.23□□□□□ -1.57
SCARNA16.4-201ENST00000516956 MID1IP1Q9NPA3 183 aa5.23□□□□□ -1.57
SCARNA16.4-201ENST00000516956 FBXO8Q9NRD0 319 aa5.23□□□□□ -1.57
SCARNA16.4-201ENST00000516956 THSD1Q9NS62 852 aa5.23□□□□□ -1.57
SCARNA16.4-201ENST00000516956 INTS9Q9NV88 658 aaKnown RBP5.23□□□□□ -1.57
SCARNA16.4-201ENST00000516956 CUEDC1Q9NWM3 386 aaPredicted RBP5.23□□□□□ -1.57
SCARNA16.4-201ENST00000516956 TOR4AQ9NXH8 423 aa5.23□□□□□ -1.57
SCARNA16.4-201ENST00000516956 AHSPQ9NZD4 102 aa5.23□□□□□ -1.57
SCARNA16.4-201ENST00000516956 PDP2Q9P2J9 529 aa5.23□□□□□ -1.57
SCARNA16.4-201ENST00000516956 GPN3Q9UHW5 284 aaPredicted RBP5.23□□□□□ -1.57
SCARNA16.4-201ENST00000516956 CDC14AQ9UNH5 594 aa5.23□□□□□ -1.57
SCARNA16.4-201ENST00000516956 SRPK3Q9UPE1 567 aa5.23□□□□□ -1.57
SCARNA16.4-201ENST00000516956 SATB2Q9UPW6 733 aa5.23□□□□□ -1.57
SCARNA16.4-201ENST00000516956 BTRCQ9Y297 605 aa5.23□□□□□ -1.57
SCARNA16.4-201ENST00000516956 NEUROG3Q9Y4Z2 214 aa5.23□□□□□ -1.57
SCARNA16.4-201ENST00000516956 RIF1Q5UIP0 2472 aaKnown RBP5.23□□□□□ -1.57
SCARNA16.4-201ENST00000516956 KNL1Q8NG31 2342 aa5.23□□□□□ -1.57
SCARNA16.4-201ENST00000516956 PIKFYVEQ9Y2I7 2098 aa5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 PTPRZ1P23471 2315 aaPredicted RBP5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 WDFY4Q6ZS81 3184 aa5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 A0A1W2PPV9 198 aa5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 FEZF1A0PJY2 475 aa5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 ARHGAP10A1A4S6 786 aa5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 HYKKA2RU49 373 aa5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 OR2A25A4D2G3 310 aa5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 TRABD2BA6NFA1 517 aa5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 TMEM114B3SHH9 223 aa5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 C9J4A7 227 aa5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 G3V2L1 256 aa5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 H0YGG7 62 aa5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 AGPSO00116 658 aa5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 HAT1O14929 419 aa5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 ZSCAN9O15535 394 aaPredicted RBP5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 NDUFS4O43181 175 aa5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 PRICKLE3O43900 615 aaPredicted RBP5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 NPHS1O60500 1241 aa5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 ULK1O75385 1050 aa5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 MYO1DO94832 1006 aa5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 SERPINE1P05121 402 aa5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 ENO1P06733 434 aaKnown RBP5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 RPS17P08708 135 aaKnown RBP5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 CD63P08962 238 aa5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 MTHFD2P13995 350 aa5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 FOLR1P15328 257 aa5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 CREB1P16220 341 aa5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 TSPAN8P19075 237 aa5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 PTX3P26022 381 aaPredicted RBP5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 VARSP26640 1264 aaKnown RBP5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 AHRP35869 848 aa5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 LSSP48449 732 aa5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 ATP1A2P50993 1020 aa5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 CDH13P55290 713 aa5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 CLDN6P56747 220 aa5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 ARF3P61204 181 aaPredicted RBP5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 SH3BP2P78314 561 aa5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 CYP4F2P78329 520 aa5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 CSNK1G2P78368 415 aa5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 MEF2AQ02078 507 aaPredicted RBP5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 CFHR1Q03591 330 aa5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 RELAQ04206 551 aa5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 RCN2Q14257 317 aa5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 KCNAB1Q14722 419 aa5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 PCLAFQ15004 111 aa5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 ZRSR2Q15696 482 aaKnown RBP5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 CHI3L2Q15782 390 aa5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 TBCCQ15814 346 aa5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 CPSF6Q16630 551 aaKnown RBP eCLIP5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 MUM1Q2TAK8 710 aa5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 DEFB110Q30KQ9 67 aa5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 UNC50Q53HI1 259 aa5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 SGO1Q5FBB7 561 aa5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 WASHC2DQ5SRD0 308 aa5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 MANEAQ5SRI9 462 aa5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 CATSPEREQ5SY80 951 aa5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 C10orf62Q5T681 223 aaPredicted RBP5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 YOD1Q5VVQ6 348 aaPredicted RBP5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 FCRL6Q6DN72 434 aa5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 GRHL2Q6ISB3 625 aa5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 TRIM40Q6P9F5 258 aa5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 SLCO4C1Q6ZQN7 724 aa5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 SH2D5Q6ZV89 423 aa5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 ABHD13Q7L211 337 aa5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 ERMP1Q7Z2K6 904 aa5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 PLD3Q8IV08 490 aa5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 LRRC56Q8IYG6 542 aaPredicted RBP5.22□□□□□ -1.57
SCARNA16.4-201ENST00000516956 DNAJC22Q8N4W6 341 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms