RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 SUCOQ9UBS9 1254 aaKnown RBP19.35■□□□□ 0.69
TRIO-223ENST00000515710 MAPRE3Q9UPY8 281 aa19.35■□□□□ 0.69
TRIO-223ENST00000515710 PRICKLE3O43900 615 aaPredicted RBP19.35■□□□□ 0.69
TRIO-223ENST00000515710 XRCC1P18887 633 aaPredicted RBP19.35■□□□□ 0.69
TRIO-223ENST00000515710 PRPS1L1P21108 318 aa19.35■□□□□ 0.69
TRIO-223ENST00000515710 PTX3P26022 381 aaPredicted RBP19.35■□□□□ 0.69
TRIO-223ENST00000515710 SHMT2P34897 504 aa19.35■□□□□ 0.69
TRIO-223ENST00000515710 SLC7A2P52569 658 aa19.35■□□□□ 0.69
TRIO-223ENST00000515710 DGKQP52824 942 aa19.35■□□□□ 0.69
TRIO-223ENST00000515710 ABATP80404 500 aa19.35■□□□□ 0.69
TRIO-223ENST00000515710 MEF2AQ02078 507 aaPredicted RBP19.35■□□□□ 0.69
TRIO-223ENST00000515710 RBBP5Q15291 538 aaKnown RBP19.35■□□□□ 0.69
TRIO-223ENST00000515710 ADNP2Q6IQ32 1131 aa19.35■□□□□ 0.69
TRIO-223ENST00000515710 TLDC1Q6P9B6 456 aa19.35■□□□□ 0.69
TRIO-223ENST00000515710 SLC2A7Q6PXP3 512 aa19.35■□□□□ 0.69
TRIO-223ENST00000515710 SYT12Q8IV01 421 aa19.35■□□□□ 0.69
TRIO-223ENST00000515710 KRTCAP2Q8N6L1 136 aa19.35■□□□□ 0.69
TRIO-223ENST00000515710 SLC13A3Q8WWT9 602 aa19.35■□□□□ 0.69
TRIO-223ENST00000515710 TESCQ96BS2 214 aa19.35■□□□□ 0.69
TRIO-223ENST00000515710 TSSK3Q96PN8 268 aa19.35■□□□□ 0.69
TRIO-223ENST00000515710 AASDHPPTQ9NRN7 309 aa19.35■□□□□ 0.69
TRIO-223ENST00000515710 ZNF624Q9P2J8 865 aaPredicted RBP19.35■□□□□ 0.69
TRIO-223ENST00000515710 C15orf38-AP3S2A0A0A6YYH1 394 aa19.34■□□□□ 0.69
TRIO-223ENST00000515710 KRT36O76013 467 aa19.34■□□□□ 0.69
TRIO-223ENST00000515710 PGRP06401 933 aa19.34■□□□□ 0.69
TRIO-223ENST00000515710 SLC6A2P23975 617 aa19.34■□□□□ 0.69
TRIO-223ENST00000515710 TACR1P25103 407 aa19.34■□□□□ 0.69
TRIO-223ENST00000515710 PSMB5P28074 263 aa19.34■□□□□ 0.69
TRIO-223ENST00000515710 BLKP51451 505 aa19.34■□□□□ 0.69
TRIO-223ENST00000515710 REEP5Q00765 189 aa19.34■□□□□ 0.69
TRIO-223ENST00000515710 TRAP1Q12931 704 aaKnown RBP19.34■□□□□ 0.69
TRIO-223ENST00000515710 PWP1Q13610 501 aa19.34■□□□□ 0.69
TRIO-223ENST00000515710 CCNIQ14094 377 aa19.34■□□□□ 0.69
TRIO-223ENST00000515710 FZD2Q14332 565 aa19.34■□□□□ 0.69
TRIO-223ENST00000515710 FAM174BQ3ZCQ3 159 aa19.34■□□□□ 0.69
TRIO-223ENST00000515710 ARPINQ7Z6K5 226 aa19.34■□□□□ 0.69
TRIO-223ENST00000515710 RIMKLAQ8IXN7 391 aa19.34■□□□□ 0.69
TRIO-223ENST00000515710 SLC15A3Q8IY34 581 aa19.34■□□□□ 0.69
TRIO-223ENST00000515710 C1orf52Q8N6N3 182 aaKnown RBP19.34■□□□□ 0.69
TRIO-223ENST00000515710 RNF148Q8N7C7 305 aa19.34■□□□□ 0.69
TRIO-223ENST00000515710 ZNF740Q8NDX6 193 aa19.34■□□□□ 0.69
TRIO-223ENST00000515710 DNAJB8Q8NHS0 232 aa19.34■□□□□ 0.69
TRIO-223ENST00000515710 CLHC1Q8NHS4 586 aa19.34■□□□□ 0.69
TRIO-223ENST00000515710 ZFPM2Q8WW38 1151 aa19.34■□□□□ 0.69
TRIO-223ENST00000515710 STARD8Q92502 1023 aa19.34■□□□□ 0.69
TRIO-223ENST00000515710 ASB9Q96DX5 294 aa19.34■□□□□ 0.69
TRIO-223ENST00000515710 TMEM74Q96NL1 305 aa19.34■□□□□ 0.69
TRIO-223ENST00000515710 SLC39A3Q9BRY0 314 aa19.34■□□□□ 0.69
TRIO-223ENST00000515710 CUEDC1Q9NWM3 386 aaPredicted RBP19.34■□□□□ 0.69
TRIO-223ENST00000515710 OR6C2Q9NZP2 312 aa19.34■□□□□ 0.69
TRIO-223ENST00000515710 NKX1-2Q9UD57 310 aaPredicted RBP19.34■□□□□ 0.69
TRIO-223ENST00000515710 ANKDD1BA6NHY2 528 aa19.33■□□□□ 0.69
TRIO-223ENST00000515710 CCNDBP1O95273 360 aa19.33■□□□□ 0.69
TRIO-223ENST00000515710 TGFB1P01137 390 aa19.33■□□□□ 0.69
TRIO-223ENST00000515710 SLC19A1P41440 591 aa19.33■□□□□ 0.69
TRIO-223ENST00000515710 ASMTP46597 345 aa19.33■□□□□ 0.69
TRIO-223ENST00000515710 PXNP49023 591 aaPredicted RBP19.33■□□□□ 0.69
TRIO-223ENST00000515710 C21orf58P58505 322 aa19.33■□□□□ 0.69
TRIO-223ENST00000515710 AP2B1P63010 937 aa19.33■□□□□ 0.69
TRIO-223ENST00000515710 TRIM25Q14258 630 aaKnown RBP19.33■□□□□ 0.69
TRIO-223ENST00000515710 CAPRIN1Q14444 709 aaKnown RBP19.33■□□□□ 0.69
TRIO-223ENST00000515710 MAPKAPK3Q16644 382 aa19.33■□□□□ 0.69
TRIO-223ENST00000515710 DPY19L1Q2PZI1 675 aa19.33■□□□□ 0.69
TRIO-223ENST00000515710 SPANXN4Q5MJ08 99 aa19.33■□□□□ 0.69
TRIO-223ENST00000515710 GALNT18Q6P9A2 607 aa19.33■□□□□ 0.69
TRIO-223ENST00000515710 DHDDSQ86SQ9 333 aa19.33■□□□□ 0.69
TRIO-223ENST00000515710 N4BP2L2Q92802 583 aaPredicted RBP19.33■□□□□ 0.69
TRIO-223ENST00000515710 SLC6A18Q96N87 628 aa19.33■□□□□ 0.69
TRIO-223ENST00000515710 IER2Q9BTL4 223 aa19.33■□□□□ 0.69
TRIO-223ENST00000515710 SIT1Q9Y3P8 196 aa19.33■□□□□ 0.69
TRIO-223ENST00000515710 PCDHA9Q9Y5H5 950 aa19.33■□□□□ 0.69
TRIO-223ENST00000515710 PRAMEF33A0A0G2JMD5 474 aa19.33■□□□□ 0.68
TRIO-223ENST00000515710 PRORSD1PA6NEY8 169 aa19.33■□□□□ 0.68
TRIO-223ENST00000515710 H0Y3Z8 333 aa19.33■□□□□ 0.68
TRIO-223ENST00000515710 H7BY64 318 aa19.33■□□□□ 0.68
TRIO-223ENST00000515710 S100A3P33764 101 aa19.33■□□□□ 0.68
TRIO-223ENST00000515710 CXCL12P48061 93 aa19.33■□□□□ 0.68
TRIO-223ENST00000515710 YBX1P67809 324 aaKnown RBP19.33■□□□□ 0.68
TRIO-223ENST00000515710 RAE1P78406 368 aaKnown RBP19.33■□□□□ 0.68
TRIO-223ENST00000515710 MTAPQ13126 283 aa19.33■□□□□ 0.68
TRIO-223ENST00000515710 FLOT2Q14254 428 aa19.33■□□□□ 0.68
TRIO-223ENST00000515710 RCN1Q15293 331 aa19.33■□□□□ 0.68
TRIO-223ENST00000515710 IYDQ6PHW0 289 aa19.33■□□□□ 0.68
TRIO-223ENST00000515710 MSANTD1Q6ZTZ1 278 aa19.33■□□□□ 0.68
TRIO-223ENST00000515710 AMIGO1Q86WK6 493 aa19.33■□□□□ 0.68
TRIO-223ENST00000515710 MFSD2AQ8NA29 543 aa19.33■□□□□ 0.68
TRIO-223ENST00000515710 LCN9Q8WX39 176 aa19.33■□□□□ 0.68
TRIO-223ENST00000515710 PRAP1Q96NZ9 151 aa19.33■□□□□ 0.68
TRIO-223ENST00000515710 EBPLQ9BY08 206 aa19.33■□□□□ 0.68
TRIO-223ENST00000515710 STX18Q9P2W9 335 aaKnown RBP19.33■□□□□ 0.68
TRIO-223ENST00000515710 L3MBTL1Q9Y468 752 aa19.33■□□□□ 0.68
TRIO-223ENST00000515710 EYSQ5T1H1 3165 aa19.32■□□□□ 0.68
TRIO-223ENST00000515710 OR5K4A6NMS3 321 aa19.32■□□□□ 0.68
TRIO-223ENST00000515710 ACOT8O14734 319 aa19.32■□□□□ 0.68
TRIO-223ENST00000515710 BCAS2O75934 225 aaPredicted RBP19.32■□□□□ 0.68
TRIO-223ENST00000515710 KCNH1O95259 989 aa19.32■□□□□ 0.68
TRIO-223ENST00000515710 CTSEP14091 401 aa19.32■□□□□ 0.68
TRIO-223ENST00000515710 HRH2P25021 359 aa19.32■□□□□ 0.68
TRIO-223ENST00000515710 TIA1P31483 386 aaKnown RBP eCLIP19.32■□□□□ 0.68
TRIO-223ENST00000515710 CSNK1G2P78368 415 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms